Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G090300 Populus trichocarpa HOM05D026498 ORTHO05D010442 8.7e-143 511.1 466 100.0
Sabra19G0104000 Salix brachista HOM05D026498 ORTHO05D010442 3.2e-89 333.2 481 78.8
Sabra19G0100600 Salix brachista HOM05D026498 ORTHO05D010442 4.2e-89 332.8 485 78.4
Potri.013G118600 Populus trichocarpa HOM05D026498 ORTHO05D010442 3.6e-32 143.7 184 59.8
Manes.13G139000 Manihot esculenta HOM05D012920 ORTHO05D012188 1.4e-23 115.2 137 54.7
TWI59G0499 Tripterygium wilfordii HOM05D012920 ORTHO05D012188 9.0e-15 85.9 133 47.4
CiPaw.03G186100 Carya illinoinensis HOM05D008991 ORTHO05D010442 4.5e-14 83.6 451 41.7
Actinidia30443 Actinidia chinensis HOM05D008991 ORTHO05D010442 3.8e-13 80.5 144 42.4
Sp4g24690 Schrenkiella parvula HOM05D008991 ORTHO05D010442 5.0e-13 80.1 149 40.9
Haze_13344 Corylus avellana HOM05D008991 ORTHO05D010442 6.5e-13 79.7 187 39.6
AT2G42560 Arabidopsis thaliana HOM05D008991 ORTHO05D010442 3.2e-12 77.4 151 41.1
AL4G41110 Arabidopsis lyrata HOM05D008991 ORTHO05D010442 7.2e-12 76.3 150 40.7
CARHR137700 Cardamine hirsuta HOM05D008991 ORTHO05D010442 7.2e-12 76.3 151 40.4
Carub.0004s2501 Capsella rubella HOM05D008991 ORTHO05D010442 9.3e-12 75.9 151 38.4
Dinv15461 Davidia involucrata HOM05D008991 ORTHO05D010442 2.1e-11 74.7 162 42.0
Lsat_1_v5_gn_8_139801 Lactuca sativa HOM05D008991 ORTHO05D010442 2.7e-11 74.3 169 37.9
Oeu036098.1 Olea europaea HOM05D008991 ORTHO05D010442 3.6e-11 73.9 191 37.7
Ciclev10014817m.g Citrus clementina HOM05D008991 ORTHO05D010442 4.6e-11 73.6 539 51.8
Cpa.g.sc209.19 Carica papaya HOM05D008991 ORTHO05D010442 2.3e-10 71.2 171 40.4
A04p32280 Brassica napus HOM05D008991 ORTHO05D010442 6.7e-10 69.7 149 38.3
BraA04t18682Z Brassica rapa HOM05D008991 ORTHO05D010442 6.7e-10 69.7 149 38.3
MELO3C019755.2 Cucumis melo HOM05D024384 ORTHO05D010442 6.7e-10 69.7 499 46.3
QL08p041343 Quercus lobata HOM05D008991 ORTHO05D010442 1.1e-09 68.9 225 33.3
Peaxi162Scf00469g00010 Petunia axillaris HOM05D011296 ORTHO05D010442 1.9e-09 68.2 222 32.4
PGR142G1329 Punica granatum HOM05D008991 ORTHO05D010442 1.9e-09 68.2 170 38.2
Cfa014713 Carpinus fangiana HOM05D008991 ORTHO05D010442 4.3e-09 67.0 193 35.8
BolC4t28480H Brassica oleracea HOM05D008991 ORTHO05D010442 5.7e-09 66.6 149 36.9
Solyc07g053360.4 Solanum lycopersicum HOM05D011296 ORTHO05D013264 7.4e-09 66.2 171 35.1
Sopen07g027330 Solanum pennellii HOM05D011296 ORTHO05D013264 7.4e-09 66.2 173 34.7
PGR142G3325 Punica granatum HOM05D020995 ORTHO05D010442 9.7e-09 65.9 174 37.9
CsaV3_6G018720 Cucumis sativus L. HOM05D024384 ORTHO05D010442 1.3e-08 65.5 500 39.0
BcaC02g07231 Brassica carinata HOM05D008991 ORTHO05D010442 2.2e-08 64.7 149 36.2
C04p69790 Brassica napus HOM05D008991 ORTHO05D010442 2.8e-08 64.3 149 34.9
Atru.chr6.2817 Acer truncatum HOM05D015016 ORTHO05D016410 3.7e-08 63.9 195 32.8
ClCG02G017970 Citrullus lanatus HOM05D024384 ORTHO05D010442 4.8e-08 63.5 126 40.5
BcaB01g03456 Brassica carinata HOM05D008991 ORTHO05D010442 8.2e-08 62.8 148 37.2
CAN.G1360.5 Capsicum annuum HOM05D011296 ORTHO05D013264 8.2e-08 62.8 205 32.7
BcaB06g29254 Brassica carinata HOM05D008991 ORTHO05D010442 1.1e-07 62.4 150 37.3
Cc05_g08110 Coffea canephora HOM05D008991 ORTHO05D010442 1.1e-07 62.4 157 35.7
Nitab4.5_0014887g0020 Nicotiana tabacum HOM05D011296 ORTHO05D013264 1.1e-07 62.4 232 28.9
CiPaw.04G131500 Carya illinoinensis HOM05D008991 ORTHO05D010442 1.4e-07 62.0 192 33.3
Migut.H02156 Erythranthe guttata HOM05D008991 ORTHO05D010442 1.4e-07 62.0 149 35.6
Hma1.2p1_0178F.1_g079010 Hydrangea macrophylla HOM05D011296 ORTHO05D013264 3.1e-07 60.8 178 39.9
Sed0024903 Sechium edule HOM05D024384 ORTHO05D010442 4.1e-07 60.5 179 35.8
Aa31LG1G24360 Aethionema arabicum HOM05D008991 ORTHO05D010442 5.3e-07 60.1 147 38.8
Sc21g0003130 Simmondsia chinensis HOM05D011296 ORTHO05D013264 5.3e-07 60.1 257 26.8
Eucgr.A01897 Eucalyptus grandis HOM05D024384 ORTHO05D010442 3.4e-06 57.4 119 40.3
COL.COLO4_36295 Corchorus olitorius HOM05D020995 ORTHO05D010442 4.5e-06 57.0 186 33.9
Nitab4.5_0008704g0010 Nicotiana tabacum HOM05D011296 ORTHO05D013264 7.7e-06 56.2 262 29.4
VMungo1080G0703 Vigna mungo HOM05D013591 ORTHO05D012188 7.7e-06 56.2 127 36.2


User provided reference genes

Program Settings