Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G028601 Populus trichocarpa HOM05D000216 ORTHO05D003638 2.9e-12 73.9 38 100.0
AUR62012105 Chenopodium quinoa HOM05D000216 ORTHO05D003638 1.9e-11 71.2 38 94.7
Ah.10g027620 Amaranthus hybridus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Ah.10g027780 Amaranthus hybridus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Ah.10g028520 Amaranthus hybridus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
ATCG00150 Arabidopsis thaliana HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
arahy.Tifrunner.gnm1.ann1.49E3RC Arachis hypogaea HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
arahy.Tifrunner.gnm1.ann1.77R9Y6 Arachis hypogaea HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
arahy.Tifrunner.gnm1.ann1.KPH33C Arachis hypogaea HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
EL10As12g24015 Beta vulgaris HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
BNapus_Darmor_BZH_scaffold_253p00040 Brassica napus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
BolSC37t60770H Brassica oleracea HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
BolSC45t60878H Brassica oleracea HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
BraSC151t45693Z Brassica rapa HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
BraSC59t46515Z Brassica rapa HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
CARHR281900 Cardamine hirsuta HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Ciclev10013984m.g Citrus clementina HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
DCAR_032472 Daucus carota HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 3.2e-11 70.5 38 92.1
Migut.D01339 Erythranthe guttata HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
HanXRQChr00c0165g0572141 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
HanXRQChr00c0560g0575801 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
HanXRQChr00c0601g0576511 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
HanXRQChr08g0210201 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
HanXRQChr10g0282501 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
HanXRQChr11g0326631 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
HanXRQChr13g0415501 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
HanXRQCPg0579821 Helianthus annuus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Lsat_1_v5_gn_2_1641 Lactuca sativa HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Lj2C1237G0 Lonicera japonica HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Lj2C1238G11 Lonicera japonica HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Lj2C1239T72 Lonicera japonica HOM05D000216 ORTHO05D000634 3.2e-11 70.5 38 92.1
LjContig00318g0018562 Lotus japonicus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
LjContig00489g0001571 Lotus japonicus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Lalb_Chr06g0172971 Lupinus albus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Lalb_Chr09g0335341 Lupinus albus HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Medtr0140s0070 Medicago truncatula HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Medtr3g029550 Medicago truncatula HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Medtr4g051103 Medicago truncatula HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Medtr5g022790 Medicago truncatula HOM05D001076 ORTHO05D001603 3.2e-11 70.5 38 92.1
Nn4g23650 Nelumbo nucifera HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
PSO548G0039 Papaver somniferum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Psat0s2754g0240 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Psat0s2961g0080 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Psat0s3650g0160 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Psat1g003880 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Psat6g219400 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Psat7g033680 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Psat7g038960 Pisum sativum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Potri.013G139080 Populus trichocarpa HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
PGR111G0049 Punica granatum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
RcHm_v2.0_CPg0502431 Rosa chinensis HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
SalBow1G2877 Salvia bowleyana HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Sed0006587 Sechium edule HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Sed0012920 Sechium edule HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Sed0015108 Sechium edule HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
SEGI_01684 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
SEGI_03518 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
SEGI_24812 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
SEGI_31181 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
SGA_v2.0_scaffold95G28823 Striga asiatica HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
unitig_91.g26494 Utricularia gibba HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
vmacro22403 Vaccinium macrocarpon HOM05D000216 ORTHO05D000634 3.2e-11 70.5 38 92.1
Zm00001eb435250 Zea mays HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Zm00001eb435460 Zea mays HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Zm00001eb435730 Zea mays HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Zm00001eb436810 Zea mays HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Zm00001eb437240 Zea mays HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Zm00001eb438330 Zea mays HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Zm00001eb441010 Zea mays HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Zm00001eb442740 Zea mays HOM05D000216 ORTHO05D003638 3.2e-11 70.5 38 92.1
Hma1.2p1_0414F.1_g147690 Hydrangea macrophylla HOM05D000216 ORTHO05D003638 4.2e-11 70.1 37 91.9
Medtr0002s0530 Medicago truncatula HOM05D000216 ORTHO05D003638 4.2e-11 70.1 38 89.5
Phvul.003G256800 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund03957 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund18044 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund27559 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund27611 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund27653 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund27865 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund27918 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund27995 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund28152 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund28178 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund28276 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund28388 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund28560 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund28651 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund28794 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund29068 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund29351 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund29741 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund29885 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund30206 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund30310 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund30432 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund30437 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund30852 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund31037 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
Hund31056 Selenicereus undatus HOM05D000216 ORTHO05D003638 9.3e-11 68.9 38 89.5
CAN.G63.18 Capsicum annuum HOM05D000216 ORTHO05D003638 1.6e-10 68.2 37 91.9
Solyc00g500051.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.6e-10 68.2 38 89.5
Solyc00g500134.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.6e-10 68.2 38 89.5
Solyc00g500204.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.6e-10 68.2 38 89.5
Solyc00g500291.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.6e-10 68.2 38 89.5
Solyc00g500320.1 Solanum lycopersicum HOM05D000216 ORTHO05D003518 1.6e-10 68.2 38 89.5
Solyc00g500335.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 1.6e-10 68.2 38 89.5
Gorai.005G105500 Gossypium raimondii HOM05D000216 ORTHO05D003638 2.1e-10 67.8 38 89.5
Lsat_1_v5_gn_8_19261 Lactuca sativa HOM05D000216 ORTHO05D003638 2.1e-10 67.8 38 89.5
Mapoly0044s0072 Marchantia polymorpha HOM05D000216 ORTHO05D003638 3.5e-10 67.0 38 86.8
Lsat_1_v5_gn_3_17360 Lactuca sativa HOM05D000216 ORTHO05D003638 4.6e-10 66.6 38 86.8
QL93p0837_0003 Quercus lobata HOM05D000216 ORTHO05D003638 4.6e-10 66.6 37 89.2
Gorai.013G017800 Gossypium raimondii HOM05D000216 ORTHO05D003638 6.0e-10 66.2 38 86.8
Nitab4.5_0001639g0020 Nicotiana tabacum HOM05D000216 ORTHO05D003638 6.0e-10 66.2 38 86.8
Hund15942 Selenicereus undatus HOM05D000216 ORTHO05D003638 7.9e-10 65.9 38 81.6
Oeu028759.1 Olea europaea HOM05D000216 ORTHO05D003638 1.0e-09 65.5 38 81.6
SEGI_00749 Sequoiadendron giganteum HOM05D000216 ORTHO05D003638 1.0e-09 65.5 38 86.8
Lalb_Chr07g0192171 Lupinus albus HOM05D000216 ORTHO05D003638 1.3e-09 65.1 38 86.8
Oeu045559.1 Olea europaea HOM05D000216 ORTHO05D003518 1.8e-09 64.7 36 86.1
CAN.G386.26 Capsicum annuum HOM05D000216 ORTHO05D003638 3.0e-09 63.9 38 84.2
CAN.G201.5 Capsicum annuum HOM05D000216 ORTHO05D003638 3.9e-09 63.5 38 84.2
Medtr7g116680 Medicago truncatula HOM05D000216 ORTHO05D003638 3.9e-09 63.5 37 83.8
Hund20346 Selenicereus undatus HOM05D000216 ORTHO05D003638 3.9e-09 63.5 37 83.8
Gohir.D02G093150 Gossypium hirsutum HOM05D000216 ORTHO05D003638 5.1e-09 63.2 38 86.8
Medtr6g025470 Medicago truncatula HOM05D000216 ORTHO05D003638 6.7e-09 62.8 37 83.8
TPR.G8664 Trifolium pratense HOM05D000216 ORTHO05D003638 1.1e-08 62.0 36 80.6
Solyc08g028875.1 Solanum lycopersicum HOM05D000216 ORTHO05D003638 1.5e-08 61.6 38 81.6
Phvul.001G151500 Phaseolus vulgaris HOM05D000216 ORTHO05D003638 2.5e-08 60.8 38 81.6
Gohir.D09G014950 Gossypium hirsutum HOM05D000216 ORTHO05D003638 3.3e-08 60.5 38 76.3
Gorai.006G017100 Gossypium raimondii HOM05D000216 ORTHO05D003638 3.3e-08 60.5 38 76.3
Nitab4.5_0000559g0180 Nicotiana tabacum HOM05D000216 ORTHO05D028337 3.3e-08 60.5 34 85.3
TPR.G8651 Trifolium pratense HOM05D000216 ORTHO05D003638 3.3e-08 60.5 36 77.8
Sed0025462 Sechium edule HOM05D000216 ORTHO05D003638 7.4e-08 59.3 30 96.7
Glyma.19G054201 Glycine max HOM05D000216 ORTHO05D003638 9.6e-08 58.9 32 90.6
Oeu024824.1 Olea europaea HOM05D000216 ORTHO05D003518 1.6e-07 58.2 35 80.0
Gohir.D04G020733 Gossypium hirsutum HOM05D000216 ORTHO05D003638 2.1e-07 57.8 32 87.5
Gorai.012G024800 Gossypium raimondii HOM05D000216 ORTHO05D003638 2.1e-07 57.8 30 93.3
Lalb_Chr06g0173061 Lupinus albus HOM05D000216 ORTHO05D003638 2.8e-07 57.4 38 76.3
CDE02G3154 Ceratophyllum demersum HOM05D000216 ORTHO05D003638 1.8e-06 54.7 30 93.3
PGSC0003DMG403017663 Solanum tuberosum HOM05D000216 ORTHO05D003518 1.8e-06 54.7 32 87.5
CSS0018496 Camellia sinensis var. sinensis HOM05D000216 ORTHO05D003638 5.3e-06 53.1 32 87.5
Psat5g134680 Pisum sativum HOM05D000216 ORTHO05D003638 9.0e-06 52.4 29 93.1


User provided reference genes

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