Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G107900 Populus trichocarpa HOM05D000113 ORTHO05D006161 9.7e-64 246.5 113 100.0
Potri.002G201400 Populus trichocarpa HOM05D000113 ORTHO05D006161 1.0e-33 146.7 103 67.0
Dinv42093 Davidia involucrata HOM05D000113 ORTHO05D006161 7.0e-30 134.0 111 62.2
Cc08_g12990 Coffea canephora HOM05D000113 ORTHO05D006161 1.5e-27 126.3 103 60.2
Cpa.g.sc151.33 Carica papaya HOM05D000113 ORTHO05D006161 1.9e-27 125.9 109 58.7
Thecc.10G083300 Theobroma cacao HOM05D000113 ORTHO05D006161 2.5e-27 125.6 103 58.3
Haze_04980 Corylus avellana HOM05D001493 ORTHO05D006161 3.3e-27 125.2 109 59.6
Cfa005867 Carpinus fangiana HOM05D000113 ORTHO05D006161 5.6e-27 124.4 109 58.7
CiPaw.07G112500 Carya illinoinensis HOM05D000113 ORTHO05D006161 7.3e-27 124.0 109 58.7
Oeu008340.1 Olea europaea HOM05D000113 ORTHO05D006161 9.5e-27 123.6 111 57.7
Thecc.01G306300 Theobroma cacao HOM05D000113 ORTHO05D006161 9.5e-27 123.6 103 57.3
Hund05453 Selenicereus undatus HOM05D000113 ORTHO05D006161 1.2e-26 123.2 111 55.0
Actinidia25823 Actinidia chinensis HOM05D000113 ORTHO05D006161 1.6e-26 122.9 102 60.8
GSVIVG01028054001 Vitis vinifera HOM05D000113 ORTHO05D006161 2.1e-26 122.5 103 59.2
Duzib138G1872 Durio zibethinus HOM05D000113 ORTHO05D006161 2.8e-26 122.1 103 57.3
RcHm_v2.0_Chr4g0407811 Rosa chinensis HOM05D000113 ORTHO05D006161 2.8e-26 122.1 109 56.0
Aqoxy2G02870 Aquilegia oxysepala HOM05D000113 ORTHO05D006161 3.6e-26 121.7 109 54.1
Gohir.D07G130400 Gossypium hirsutum HOM05D000113 ORTHO05D006161 4.7e-26 121.3 103 57.3
Gorai.001G141100 Gossypium raimondii HOM05D000113 ORTHO05D006161 4.7e-26 121.3 103 57.3
SalBow6G1114 Salvia bowleyana HOM05D000113 ORTHO05D006161 4.7e-26 121.3 111 55.9
Migut.D00126 Erythranthe guttata HOM05D000113 ORTHO05D006161 8.0e-26 120.6 112 57.1
Hma1.2p1_0212F.1_g090260 Hydrangea macrophylla HOM05D000113 ORTHO05D006161 8.0e-26 120.6 111 55.9
Prupe.1G193500 Prunus persica HOM05D000113 ORTHO05D006161 8.0e-26 120.6 108 55.6
COL.COLO4_23301 Corchorus olitorius HOM05D000113 ORTHO05D006161 1.0e-25 120.2 103 56.3
Gohir.A07G126300 Gossypium hirsutum HOM05D000113 ORTHO05D006161 1.0e-25 120.2 103 56.3
TAR633G2709 Trochodendron aralioides HOM05D000113 ORTHO05D006161 1.0e-25 120.2 110 56.4
QL12p027746 Quercus lobata HOM05D000113 ORTHO05D006161 1.8e-25 119.4 109 55.0
Sc15g0001890 Simmondsia chinensis HOM05D000113 ORTHO05D006161 1.8e-25 119.4 112 52.7
TAR362G0332 Trochodendron aralioides HOM05D000113 ORTHO05D006161 2.3e-25 119.0 111 54.1
MD04G1241500 Malus domestica HOM05D000113 ORTHO05D006161 3.0e-25 118.6 103 57.3
TWI59G0818 Tripterygium wilfordii HOM05D000113 ORTHO05D006161 3.0e-25 118.6 108 56.5
FAN11G2310 Fragaria x ananassa HOM05D000113 ORTHO05D006161 4.0e-25 118.2 109 54.1
Manes.01G223000 Manihot esculenta HOM05D000113 ORTHO05D006161 4.0e-25 118.2 102 58.8
Lj5A370T56 Lonicera japonica HOM05D000113 ORTHO05D006161 8.9e-25 117.1 111 55.0
CSS0016737 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D006161 1.2e-24 116.7 111 55.0
CANSAT80G0530 Cannabis sativa HOM05D000113 ORTHO05D006161 1.2e-24 116.7 104 53.8
Sed0026170 Sechium edule HOM05D000113 ORTHO05D006161 1.2e-24 116.7 111 50.5
EL10Ac6g14998 Beta vulgaris HOM05D000113 ORTHO05D006161 1.5e-24 116.3 111 53.2
Eucgr.E04059 Eucalyptus grandis HOM05D000113 ORTHO05D006161 1.5e-24 116.3 103 56.3
FvH4_3g40090 Fragaria vesca HOM05D000113 ORTHO05D006161 2.0e-24 115.9 109 53.2
Lj2C1199T13 Lonicera japonica HOM05D000113 ORTHO05D006161 2.0e-24 115.9 111 55.0
MSTRG.21654 Avicennia marina HOM05D000113 ORTHO05D006161 2.6e-24 115.5 111 53.2
CSS0034422 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D006161 3.4e-24 115.2 111 55.0
Peaxi162Scf00150g00139 Petunia axillaris HOM05D000113 ORTHO05D006161 3.4e-24 115.2 111 52.3
Sc26g0003690 Simmondsia chinensis HOM05D000113 ORTHO05D006161 3.4e-24 115.2 111 52.3
SGA_v2.0_scaffold334G49027 Striga asiatica HOM05D000113 ORTHO05D006161 5.7e-24 114.4 111 51.4
ClCG09G005490 Citrullus lanatus HOM05D000113 ORTHO05D006161 7.5e-24 114.0 112 50.0
Nn5g26851 Nelumbo nucifera HOM05D000113 ORTHO05D006161 9.8e-24 113.6 111 53.2
Atru.chr5.1086 Acer truncatum HOM05D000113 ORTHO05D006161 1.3e-23 113.2 102 56.9
vmacro04631 Vaccinium macrocarpon HOM05D000113 ORTHO05D006161 1.3e-23 113.2 103 56.3
MBI04_g31155_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D006161 1.7e-23 112.8 108 52.8
Ciclev10018519m.g Citrus clementina HOM05D000113 ORTHO05D006161 2.2e-23 112.5 111 54.1
Nitab4.5_0004367g0140 Nicotiana tabacum HOM05D000113 ORTHO05D006161 2.2e-23 112.5 111 52.3
unitig_22.g5234 Utricularia gibba HOM05D000113 ORTHO05D006161 2.2e-23 112.5 103 54.4
CAN.G986.23 Capsicum annuum HOM05D000113 ORTHO05D006161 3.7e-23 111.7 111 51.4
FAN16G3510 Fragaria x ananassa HOM05D000113 ORTHO05D006161 4.9e-23 111.3 109 52.3
PGSC0003DMG401000100 Solanum tuberosum HOM05D000113 ORTHO05D006161 8.3e-23 110.5 103 54.4
MELO3C015960.2 Cucumis melo HOM05D000113 ORTHO05D006161 1.1e-22 110.2 112 49.1
CsaV3_7G029610 Cucumis sativus L. HOM05D000113 ORTHO05D006161 1.4e-22 109.8 112 49.1
Rhsim01G0287700 Rhododendron simsii HOM05D000113 ORTHO05D006161 1.8e-22 109.4 106 54.7
PGR044G2751 Punica granatum HOM05D000113 ORTHO05D006161 2.4e-22 109.0 109 55.0
Sp7g11220 Schrenkiella parvula HOM05D000113 ORTHO05D006161 7.0e-22 107.5 100 55.0
Solyc01g095710.3 Solanum lycopersicum HOM05D000113 ORTHO05D006161 7.0e-22 107.5 103 52.4
Sopen01g039450 Solanum pennellii HOM05D000113 ORTHO05D006161 7.0e-22 107.5 103 52.4
Os02g0736600 Oryza sativa ssp. japonica HOM05D000113 ORTHO05D006161 9.2e-22 107.1 108 46.3
Zm00001eb253900 Zea mays HOM05D000113 ORTHO05D006161 9.2e-22 107.1 111 47.7
Aa31LG1G28830 Aethionema arabicum HOM05D000113 ORTHO05D006161 2.0e-21 105.9 100 54.0
Prupe.1G445700 Prunus persica HOM05D000113 ORTHO05D006161 2.7e-21 105.5 112 49.1
PSO675G6280 Papaver somniferum HOM05D000113 ORTHO05D006161 3.5e-21 105.1 107 47.7
THA.LOC104802184 Tarenaya hassleriana HOM05D000113 ORTHO05D006161 3.5e-21 105.1 100 51.0
ECA248G0290 Erigeron canadensis HOM05D000113 ORTHO05D006161 4.6e-21 104.8 111 49.5
Thhalv10024243m.g Eutrema salsugineum HOM05D000113 ORTHO05D006161 7.8e-21 104.0 100 54.0
BcaC03g17457 Brassica carinata HOM05D000113 ORTHO05D006161 1.0e-20 103.6 101 53.5
A02p35320 Brassica napus HOM05D000113 ORTHO05D006161 1.0e-20 103.6 101 53.5
C02p54060 Brassica napus HOM05D000113 ORTHO05D006161 1.0e-20 103.6 101 53.5
BolC2t11468H Brassica oleracea HOM05D000113 ORTHO05D006161 1.0e-20 103.6 101 53.5
BraA02t08535Z Brassica rapa HOM05D000113 ORTHO05D006161 1.0e-20 103.6 101 53.5
ATR0307G121 Amborella trichopoda HOM05D000113 ORTHO05D006161 1.3e-20 103.2 111 48.6
BcaB07g30168 Brassica carinata HOM05D000113 ORTHO05D006161 1.3e-20 103.2 101 53.5
Lsat_1_v5_gn_3_139220 Lactuca sativa HOM05D000113 ORTHO05D006161 1.7e-20 102.8 111 48.6
AL1G47770 Arabidopsis lyrata HOM05D000113 ORTHO05D006161 3.0e-20 102.1 100 52.0
AL8G14950 Arabidopsis lyrata HOM05D000113 ORTHO05D006161 3.0e-20 102.1 100 53.0
AT1G33390 Arabidopsis thaliana HOM05D000113 ORTHO05D006161 5.0e-20 101.3 100 52.0
Carub.0001s3158 Capsella rubella HOM05D000113 ORTHO05D006161 1.1e-19 100.1 100 52.0
CARHR032810 Cardamine hirsuta HOM05D000113 ORTHO05D006161 1.1e-19 100.1 100 51.0
DCAR_012372 Daucus carota HOM05D000113 ORTHO05D006161 1.1e-19 100.1 103 45.6
SEGI_22008 Sequoiadendron giganteum HOM05D000113 ORTHO05D006161 1.1e-19 100.1 103 49.5
arahy.Tifrunner.gnm1.ann1.M111ST Arachis hypogaea HOM05D000113 ORTHO05D006161 1.5e-19 99.8 122 44.3
SHI19097 Sapria himalayana HOM05D000113 ORTHO05D006161 1.9e-19 99.4 102 51.0
arahy.Tifrunner.gnm1.ann1.SIBB7F Arachis hypogaea HOM05D000113 ORTHO05D006161 2.5e-19 99.0 122 44.3
AUR62025517 Chenopodium quinoa HOM05D000113 ORTHO05D006161 2.5e-19 99.0 110 48.2
HanXRQChr04g0105431 Helianthus annuus HOM05D000113 ORTHO05D006161 2.5e-19 99.0 111 49.5
SEGI_29750 Sequoiadendron giganteum HOM05D000113 ORTHO05D006161 4.3e-19 98.2 103 48.5
PSO339G3312 Papaver somniferum HOM05D000113 ORTHO05D006161 9.5e-19 97.1 107 46.7
Lj4g0011992 Lotus japonicus HOM05D000113 ORTHO05D006161 3.6e-18 95.1 121 43.8
AUR62008717 Chenopodium quinoa HOM05D000113 ORTHO05D006161 6.2e-18 94.4 110 46.4
Lj2g0016628 Lotus japonicus HOM05D000113 ORTHO05D006161 6.2e-18 94.4 120 44.2
EL10Ac4g10264 Beta vulgaris HOM05D000113 ORTHO05D006161 8.0e-18 94.0 104 51.0
Atru.chr9.1269 Acer truncatum HOM05D000113 ORTHO05D006161 1.8e-17 92.8 89 53.9
EL10Ac4g07792 Beta vulgaris HOM05D000113 ORTHO05D006161 2.3e-17 92.4 105 47.6
Lalb_Chr10g0099391 Lupinus albus HOM05D000113 ORTHO05D006161 2.3e-17 92.4 114 42.1
Phvul.010G084200 Phaseolus vulgaris HOM05D000113 ORTHO05D006161 4.0e-17 91.7 119 41.2
Psat7g233480 Pisum sativum HOM05D000113 ORTHO05D006161 4.0e-17 91.7 120 42.5
EL10Ac4g10280 Beta vulgaris HOM05D000113 ORTHO05D006161 1.2e-16 90.1 101 50.5
Glyma.03G024000 Glycine max HOM05D000113 ORTHO05D006161 1.5e-16 89.7 114 43.0
BcaC03g17455 Brassica carinata HOM05D000113 ORTHO05D006161 2.0e-16 89.4 100 50.0
VMungo0331G1928 Vigna mungo HOM05D001793 ORTHO05D006161 2.0e-16 89.4 119 41.2
Glyma.01G142700 Glycine max HOM05D000113 ORTHO05D006161 2.6e-16 89.0 120 42.5
Ca_15122_v3 Cicer arietinum L. HOM05D000113 ORTHO05D006161 3.4e-16 88.6 120 42.5
Medtr4g120070 Medicago truncatula HOM05D000113 ORTHO05D006161 3.4e-16 88.6 121 40.5
Medtr4g023590 Medicago truncatula HOM05D000113 ORTHO05D006161 7.5e-16 87.4 120 40.8
Pp3c3_18630 Physcomitrium patens HOM05D000113 ORTHO05D006161 7.5e-16 87.4 99 45.5
TPR.G9858 Trifolium pratense HOM05D000113 ORTHO05D006161 7.5e-16 87.4 120 40.8
RcHm_v2.0_Chr7g0220171 Rosa chinensis HOM05D000113 ORTHO05D006161 1.7e-15 86.3 107 39.3
CDE07G0864 Ceratophyllum demersum HOM05D000113 ORTHO05D006161 6.4e-15 84.3 63 61.9
CBR_g66799 Chara braunii HOM05D000113 ORTHO05D006161 9.2e-14 80.5 104 39.4
Mapoly0044s0018 Marchantia polymorpha HOM05D000113 ORTHO05D006161 2.5e-11 72.4 112 33.0
FAN21G3024 Fragaria x ananassa HOM05D000113 ORTHO05D006161 4.3e-11 71.6 109 41.3
ECA248G0443 Erigeron canadensis HOM05D000009 ORTHO05D000008 2.6e-08 62.4 72 45.8
DCAR_018927 Daucus carota HOM05D000310 ORTHO05D006161 4.4e-08 61.6 105 37.1
TPR.G23919 Trifolium pratense HOM05D000113 ORTHO05D006161 4.4e-08 61.6 69 49.3
MCO05G299 Micromonas commoda HOM05D000113 ORTHO05D006161 1.3e-07 60.1 105 37.1
AagrBONN_evm.TU.Sc2ySwM_344.808 Anthoceros agrestis HOM05D000482 ORTHO05D000349 6.4e-07 57.8 49 42.9


User provided reference genes

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