Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 5.0e-289 997.7 762 100.0
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 1.1e-256 890.2 762 91.5
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 7.3e-256 887.5 762 91.3
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 5.2e-169 599.0 767 71.7
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 7.3e-155 552.0 767 72.0
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 9.5e-155 551.6 764 70.2
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 9.5e-155 551.6 762 59.2
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 3.1e-153 546.6 764 69.8
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 3.1e-153 546.6 763 70.8
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 8.9e-153 545.0 768 60.8
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 2.4e-150 537.0 764 70.3
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 4.1e-150 536.2 761 60.8
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 3.5e-149 533.1 764 71.3
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 4.6e-149 532.7 764 70.2
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 4.6e-149 532.7 775 68.4
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 6.2e-146 522.3 526 63.9
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 2.6e-144 516.9 762 69.7
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 5.4e-142 509.2 766 68.9
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 9.2e-142 508.4 524 53.1
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 9.5e-139 498.4 526 62.5
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 8.1e-138 495.4 773 66.1
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.2e-136 491.5 677 73.6
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 2.0e-136 490.7 527 61.7
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 3.2e-134 483.4 447 56.6
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 6.6e-132 475.7 772 67.4
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.1e-131 474.9 529 58.8
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 1.5e-131 474.6 533 59.7
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 2.5e-131 473.8 529 58.8
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.3e-131 473.0 784 58.7
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 9.6e-131 471.9 675 72.1
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 3.6e-130 469.9 748 68.3
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 1.1e-129 468.4 773 65.1
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 2.0e-128 464.2 683 69.8
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 3.4e-128 463.4 663 70.3
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 4.4e-128 463.0 527 58.4
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 9.9e-128 461.8 672 63.1
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 8.4e-127 458.8 519 57.6
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 1.4e-126 458.0 529 60.7
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 4.2e-126 456.4 768 65.1
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 4.2e-126 456.4 774 63.2
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.2e-125 454.9 771 43.8
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.2e-125 454.9 771 43.8
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 3.0e-124 450.3 769 58.1
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 3.9e-124 449.9 524 56.3
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 1.1e-123 448.4 681 67.3
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 2.5e-123 447.2 674 69.9
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 3.3e-123 446.8 528 54.4
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 3.3e-123 446.8 772 64.5
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 4.3e-123 446.4 527 59.4
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 1.3e-122 444.9 681 66.7
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 1.3e-122 444.9 519 58.4
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 3.6e-122 443.4 524 55.9
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 1.1e-121 441.8 733 64.1
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 6.9e-121 439.1 763 58.8
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 1.2e-120 438.3 519 51.6
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.2e-120 438.3 363 71.9
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 5.8e-120 436.0 525 57.5
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.4e-118 431.4 462 63.4
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 3.2e-118 430.3 521 56.2
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.2e-118 430.3 528 53.8
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 4.2e-118 429.9 462 63.6
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 4.2e-118 429.9 530 57.0
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 1.2e-117 428.3 528 56.6
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 6.0e-117 426.0 433 63.0
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 1.3e-116 424.9 518 53.9
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 1.8e-116 424.5 517 50.7
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 1.8e-116 424.5 773 63.8
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 6.7e-116 422.5 520 55.4
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 3.3e-115 420.2 668 68.6
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 7.4e-115 419.1 767 55.4
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 1.3e-114 418.3 505 58.2
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 2.1e-114 417.5 464 60.6
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 1.1e-113 415.2 419 65.4
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 4.0e-113 413.3 673 68.5
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 6.9e-113 412.5 680 65.3
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 1.5e-112 411.4 647 70.5
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 1.5e-112 411.4 766 63.6
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 2.2e-111 407.5 527 53.3
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 2.2e-111 407.5 553 77.9
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 1.1e-110 405.2 347 70.9
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 5.5e-110 402.9 760 63.7
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 2.1e-109 401.0 808 60.0
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 2.1e-109 401.0 556 79.7
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 6.0e-109 399.4 535 53.5
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 7.9e-109 399.1 455 56.9
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 8.7e-108 395.6 457 59.1
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 1.5e-107 394.8 528 52.5
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 1.5e-107 394.8 528 52.5
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 1.3e-106 391.7 540 80.4
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 8.2e-106 389.0 505 55.8
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 9.0e-105 385.6 525 53.0
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 1.5e-104 384.8 528 51.7
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 2.9e-103 380.6 325 73.5
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 1.1e-102 378.6 525 52.4
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.0e-100 372.1 447 57.5
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 1.3e-100 371.7 407 60.9
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 6.3e-98 362.8 588 65.6
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.4e-97 361.7 426 58.7
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 3.1e-97 360.5 317 70.0
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 5.3e-97 359.8 340 65.9
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 2.7e-85 320.9 361 60.4
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 2.9e-71 274.2 525 37.1
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 4.7e-69 266.9 189 68.3
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 2.3e-68 264.6 517 44.1
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 9.1e-65 252.7 520 35.4
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.4e-59 233.8 197 60.4
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 5.0e-39 167.2 358 38.8
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 1.0e-31 142.9 390 39.0
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 2.9e-26 124.8 364 38.7
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 3.3e-22 111.3 215 54.4
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 5.8e-19 100.5 133 39.8
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 4.6e-16 90.9 63 65.1
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 3.9e-15 87.8 129 38.8
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 5.6e-14 84.0 48 77.1


User provided reference genes

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