Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G127500 Populus trichocarpa HOM05D006201 ORTHO05D007178 2.7e-291 1004.6 511 100.0
Sabra16G0130900 Salix brachista HOM05D006201 ORTHO05D007178 1.5e-252 875.9 499 89.4
Manes.09G111900 Manihot esculenta HOM05D006201 ORTHO05D007178 9.5e-159 564.3 499 58.7
Thecc.05G006600 Theobroma cacao HOM05D006201 ORTHO05D007178 2.3e-141 506.5 499 53.5
Duzib093G1324 Durio zibethinus HOM05D006201 ORTHO05D007178 2.1e-134 483.4 490 53.5
TWI77G1003 Tripterygium wilfordii HOM05D006201 ORTHO05D007178 1.2e-132 477.6 506 54.0
Ciclev10024812m.g Citrus clementina HOM05D006201 ORTHO05D007178 1.3e-131 474.2 508 51.8
Dinv12171 Davidia involucrata HOM05D006201 ORTHO05D007178 2.7e-129 466.5 506 49.8
Cfa017112 Carpinus fangiana HOM05D006201 ORTHO05D007178 2.5e-127 459.9 503 50.5
Haze_21088 Corylus avellana HOM05D006201 ORTHO05D007178 1.3e-126 457.6 502 49.8
Gohir.A04G095500 Gossypium hirsutum HOM05D006201 ORTHO05D007178 2.6e-124 449.9 504 49.0
CiPaw.09G215500 Carya illinoinensis HOM05D006201 ORTHO05D007178 1.3e-123 447.6 502 49.0
Cpa.g.sc861.1 Carica papaya HOM05D006201 ORTHO05D007178 2.9e-123 446.4 508 48.6
Gorai.012G119200 Gossypium raimondii HOM05D006201 ORTHO05D007178 5.4e-122 442.2 504 48.8
Gohir.D04G135400 Gossypium hirsutum HOM05D006201 ORTHO05D007178 1.2e-121 441.0 504 48.6
QL07p033902 Quercus lobata HOM05D006201 ORTHO05D007178 2.7e-121 439.9 486 49.6
Actinidia11549 Actinidia chinensis HOM05D006201 ORTHO05D007178 5.1e-120 435.6 504 48.8
Prupe.6G285000 Prunus persica HOM05D006201 ORTHO05D007178 5.3e-117 425.6 506 47.8
vmacro20327 Vaccinium macrocarpon HOM05D006201 ORTHO05D007178 2.6e-116 423.3 504 46.6
FAN02G1356 Fragaria x ananassa HOM05D006201 ORTHO05D007178 2.7e-113 413.3 501 45.1
FAN05G0393 Fragaria x ananassa HOM05D006201 ORTHO05D007178 2.7e-113 413.3 501 45.3
Rhsim05G0225800 Rhododendron simsii HOM05D006201 ORTHO05D007178 4.6e-113 412.5 507 45.8
FAN05G0066 Fragaria x ananassa HOM05D006201 ORTHO05D007178 6.0e-113 412.1 501 45.1
FvH4_6g10600 Fragaria vesca HOM05D006201 ORTHO05D007178 1.0e-112 411.4 501 45.5
Lj2C67G1 Lonicera japonica HOM05D006201 ORTHO05D007178 9.6e-111 404.8 499 45.1
RcHm_v2.0_Chr3g0461591 Rosa chinensis HOM05D006201 ORTHO05D007178 1.6e-110 404.1 504 45.4
CANSAT35G1627 Cannabis sativa HOM05D006201 ORTHO05D007178 1.1e-109 401.4 498 45.2
MD04G1166800 Malus domestica HOM05D006201 ORTHO05D007178 2.4e-109 400.2 502 45.8
FAN14G5119 Fragaria x ananassa HOM05D006201 ORTHO05D007178 6.0e-105 385.6 501 43.5
PGR004G1794 Punica granatum HOM05D006201 ORTHO05D007178 4.3e-103 379.4 495 44.4
Oeu020418.1 Olea europaea HOM05D006201 ORTHO05D007178 2.6e-100 370.2 487 41.3
DCAR_023994 Daucus carota HOM05D006201 ORTHO05D007178 3.4e-100 369.8 494 42.3
Sed0013207 Sechium edule HOM05D006201 ORTHO05D007178 2.9e-99 366.7 499 41.7
ClCG03G002510 Citrullus lanatus HOM05D006201 ORTHO05D007178 3.6e-97 359.8 501 41.3
THA.LOC104823304 Tarenaya hassleriana HOM05D006201 ORTHO05D007178 4.3e-95 352.8 509 41.1
MSTRG.5539 Avicennia marina HOM05D006201 ORTHO05D007178 1.7e-94 350.9 496 40.1
CsaV3_1G013180 Cucumis sativus L. HOM05D006201 ORTHO05D007178 2.2e-94 350.5 508 40.4
Psat3g124360 Pisum sativum HOM05D006201 ORTHO05D007178 4.8e-94 349.4 504 41.1
Aa31LG5G18800 Aethionema arabicum HOM05D006201 ORTHO05D007178 8.2e-94 348.6 504 39.5
MBI09_g02137_MAGBIO Magnolia biondii HOM05D006201 ORTHO05D007178 2.4e-93 347.1 507 43.0
Rhsim05G0226000 Rhododendron simsii HOM05D006201 ORTHO05D007178 6.9e-93 345.5 500 41.6
VMungo1383G1579 Vigna mungo HOM05D006201 ORTHO05D007178 2.6e-92 343.6 511 41.9
Aqoxy1G01280 Aquilegia oxysepala HOM05D006201 ORTHO05D007178 1.4e-90 337.8 507 40.4
A05p40010 Brassica napus HOM05D006201 ORTHO05D007178 2.5e-90 337.0 506 40.1
BraA05t22910Z Brassica rapa HOM05D006201 ORTHO05D007178 2.5e-90 337.0 506 40.1
C05p59050 Brassica napus HOM05D006201 ORTHO05D007178 3.2e-90 336.7 506 40.3
Nitab4.5_0006173g0010 Nicotiana tabacum HOM05D006201 ORTHO05D007178 3.2e-90 336.7 501 39.3
Cc06_g00730 Coffea canephora HOM05D006201 ORTHO05D007178 4.2e-90 336.3 502 39.6
AL3G19800 Arabidopsis lyrata HOM05D006201 ORTHO05D007178 5.5e-90 335.9 503 39.4
PGSC0003DMG400026051 Solanum tuberosum HOM05D006201 ORTHO05D007178 7.2e-90 335.5 499 39.3
BolC5t34557H Brassica oleracea HOM05D006201 ORTHO05D007178 9.4e-90 335.1 506 40.1
Solyc01g090260.5.1 Solanum lycopersicum HOM05D006201 ORTHO05D007178 1.6e-89 334.3 499 39.1
CAN.G1473.10 Capsicum annuum HOM05D006201 ORTHO05D007178 6.1e-89 332.4 500 39.0
MELO3C004988.2 Cucumis melo HOM05D006201 ORTHO05D007178 7.9e-89 332.0 485 39.6
Glyma.07G156700 Glycine max HOM05D006201 ORTHO05D007178 7.9e-89 332.0 503 40.8
PSO349G0155 Papaver somniferum HOM05D006201 ORTHO05D007178 1.0e-88 331.6 505 40.0
Nitab4.5_0003493g0040 Nicotiana tabacum HOM05D006201 ORTHO05D007178 1.4e-88 331.3 495 38.8
Lalb_Chr01g0023361 Lupinus albus HOM05D006201 ORTHO05D007178 1.8e-88 330.9 507 39.8
Medtr7g070280 Medicago truncatula HOM05D006201 ORTHO05D007178 1.8e-88 330.9 504 39.5
Sopen01g036050 Solanum pennellii HOM05D006201 ORTHO05D007178 1.5e-87 327.8 499 38.5
TPR.G6637 Trifolium pratense HOM05D006201 ORTHO05D007178 7.4e-87 325.5 507 39.8
PSO017G2042 Papaver somniferum HOM05D006201 ORTHO05D007178 1.7e-86 324.3 491 40.7
Sc22g0002850 Simmondsia chinensis HOM05D006201 ORTHO05D007178 2.2e-86 323.9 494 39.5
Lj1g0025030 Lotus japonicus HOM05D006201 ORTHO05D007178 3.7e-86 323.2 509 40.1
CARHR083120 Cardamine hirsuta HOM05D006201 ORTHO05D007178 8.2e-86 322.0 504 38.1
Sp3g07220 Schrenkiella parvula HOM05D006201 ORTHO05D007178 1.7e-83 314.3 504 38.1
EL10Ac5g12480 Beta vulgaris HOM05D006201 ORTHO05D007178 3.8e-83 313.2 503 37.6
HanXRQChr12g0375461 Helianthus annuus HOM05D006201 ORTHO05D007178 1.1e-82 311.6 503 39.2
Thhalv10022535m.g Eutrema salsugineum HOM05D006201 ORTHO05D007178 1.9e-82 310.8 504 38.1
Carub.0003s0793 Capsella rubella HOM05D006201 ORTHO05D007178 3.2e-82 310.1 505 36.2
AUR62036404 Chenopodium quinoa HOM05D006201 ORTHO05D007178 3.6e-81 306.6 510 38.0
Migut.J00094 Erythranthe guttata HOM05D006201 ORTHO05D007178 4.7e-81 306.2 498 37.3
BcaC05g29618 Brassica carinata HOM05D006201 ORTHO05D007178 6.1e-81 305.8 505 37.8
AUR62030757 Chenopodium quinoa HOM05D006201 ORTHO05D007178 1.8e-80 304.3 512 37.7
Hma1.2p1_0479F.1_g161690 Hydrangea macrophylla HOM05D006201 ORTHO05D007178 3.9e-80 303.1 340 46.2
ECA248G2923 Erigeron canadensis HOM05D006201 ORTHO05D007178 4.4e-79 299.7 501 37.3
SGA_v2.0_scaffold85G26680 Striga asiatica HOM05D006201 ORTHO05D007178 2.8e-78 297.0 500 38.6
COL.COLO4_14449 Corchorus olitorius HOM05D006201 ORTHO05D007178 1.4e-77 294.7 371 45.0
Hund14942 Selenicereus undatus HOM05D006201 ORTHO05D007178 2.6e-76 290.4 479 38.2
AUR62044474 Chenopodium quinoa HOM05D006201 ORTHO05D007178 3.5e-76 290.0 505 37.2
Eucgr.K02944 Eucalyptus grandis HOM05D006201 ORTHO05D007178 4.5e-76 289.7 466 38.4
Ah.12g059100 Amaranthus hybridus HOM05D006201 ORTHO05D007178 6.5e-75 285.8 502 35.5
Lsat_1_v5_gn_5_149661 Lactuca sativa HOM05D006201 ORTHO05D007178 1.8e-69 267.7 511 35.6
arahy.Tifrunner.gnm1.ann1.0N3F9M Arachis hypogaea HOM05D006201 ORTHO05D007178 6.1e-65 252.7 503 34.4
arahy.Tifrunner.gnm1.ann1.WUZ318 Arachis hypogaea HOM05D006201 ORTHO05D007178 8.0e-65 252.3 503 34.8
TAR623G1438 Trochodendron aralioides HOM05D006201 ORTHO05D007178 4.0e-64 250.0 264 51.1
unitig_578.g15909 Utricularia gibba HOM05D006201 ORTHO05D007178 2.2e-62 244.2 501 34.3
ClCG10G022450 Citrullus lanatus HOM05D006201 ORTHO05D007178 1.1e-53 215.3 453 33.3
Zm00001eb012870 Zea mays HOM05D006201 ORTHO05D007178 7.8e-52 209.1 505 33.3
HPP92_025099 Vanilla planifolia HOM05D006201 ORTHO05D007178 2.9e-51 207.2 514 29.6
Peaxi162Scf00028g00413 Petunia axillaris HOM05D006201 ORTHO05D007178 4.3e-50 203.4 394 34.8
ATR0605G310 Amborella trichopoda HOM05D006201 ORTHO05D007178 8.3e-46 189.1 356 34.6
GSVIVG01030267001 Vitis vinifera HOM05D006201 ORTHO05D007178 3.2e-45 187.2 231 48.5
CSS0012693 Camellia sinensis var. sinensis HOM05D006201 ORTHO05D007178 4.4e-39 166.8 265 41.9
Ca_07697_v3 Cicer arietinum L. HOM05D006201 ORTHO05D007178 1.2e-31 142.1 296 33.1
CDE04G1687 Ceratophyllum demersum HOM05D006201 ORTHO05D007178 4.1e-29 133.7 474 25.9
TAR623G1020 Trochodendron aralioides HOM05D006201 ORTHO05D007178 7.1e-29 132.9 143 52.4
SEGI_30477 Sequoiadendron giganteum HOM05D006201 ORTHO05D007178 7.8e-28 129.4 463 25.1
Nn4g22431 Nelumbo nucifera HOM05D006201 ORTHO05D007178 2.6e-23 114.4 205 39.5
AT3G08800 Arabidopsis thaliana HOM05D006201 ORTHO05D007178 8.4e-22 109.4 197 36.0
Mapoly0011s0138 Marchantia polymorpha HOM05D006201 ORTHO05D007178 1.9e-21 108.2 528 24.4
Nn2g13629 Nelumbo nucifera HOM05D001630 ORTHO05D007178 4.6e-20 103.6 475 24.6
CARHR220410 Cardamine hirsuta HOM05D006201 ORTHO05D007178 3.9e-19 100.5 132 39.4
Rhsim05G0225900 Rhododendron simsii HOM05D006201 ORTHO05D007178 1.3e-14 85.5 76 59.2
Rhsim05G0204900 Rhododendron simsii HOM05D006201 ORTHO05D007178 1.2e-07 62.4 65 50.8


User provided reference genes

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