Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.016G062900 Populus trichocarpa HOM05D000861 ORTHO05D004749 3.8e-208 728.0 396 100.0
Sabra16G0065200 Salix brachista HOM05D000861 ORTHO05D004749 5.4e-186 654.4 401 83.8
Sabra16G0064900 Salix brachista HOM05D000861 ORTHO05D004749 4.3e-175 618.2 416 84.1
Sabra16G0065500 Salix brachista HOM05D000861 ORTHO05D004749 1.2e-161 573.5 366 80.9
Sabra06G0151900 Salix brachista HOM05D000861 ORTHO05D004749 3.3e-159 565.5 392 73.2
Manes.08G039800 Manihot esculenta HOM05D000861 ORTHO05D004749 1.9e-146 523.1 353 70.0
Dinv25026 Davidia involucrata HOM05D000861 ORTHO05D004749 6.7e-144 514.6 348 70.1
Haze_20079 Corylus avellana HOM05D000861 ORTHO05D004749 9.7e-143 510.8 350 70.3
TWI74G1428 Tripterygium wilfordii HOM05D000861 ORTHO05D004749 9.7e-143 510.8 351 70.4
CSS0019173 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 3.4e-140 502.3 358 67.9
Lj1g0012940 Lotus japonicus HOM05D000861 ORTHO05D004749 4.5e-140 501.9 349 69.6
Rhsim10G0079800 Rhododendron simsii HOM05D000861 ORTHO05D004749 2.9e-139 499.2 356 66.9
RcHm_v2.0_Chr1g0331291 Rosa chinensis HOM05D000861 ORTHO05D004749 2.5e-138 496.1 339 68.7
FAN01G1629 Fragaria x ananassa HOM05D000861 ORTHO05D004749 3.2e-138 495.7 344 67.7
CiPaw.09G025900 Carya illinoinensis HOM05D000861 ORTHO05D004749 5.1e-136 488.4 348 68.7
FvH4_7g05020 Fragaria vesca HOM05D000861 ORTHO05D004749 6.7e-136 488.0 344 66.9
FAN06G3356 Fragaria x ananassa HOM05D000861 ORTHO05D004749 8.8e-136 487.6 344 66.9
FAN10G0630 Fragaria x ananassa HOM05D000861 ORTHO05D004749 7.4e-135 484.6 344 66.3
Prupe.2G061200 Prunus persica HOM05D000861 ORTHO05D004749 1.4e-133 480.3 343 67.3
CANSAT54G1949 Cannabis sativa HOM05D000861 ORTHO05D004749 4.1e-133 478.8 325 69.5
Ca_00040_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 4.1e-133 478.8 349 65.6
CSS0040474 Camellia sinensis var. sinensis HOM05D000861 ORTHO05D004749 9.1e-133 477.6 330 69.1
Sp3g10170 Schrenkiella parvula HOM05D000861 ORTHO05D004749 9.1e-133 477.6 348 65.8
Haze_04427 Corylus avellana HOM05D000861 ORTHO05D004749 1.5e-132 476.9 349 66.8
QL07p025600 Quercus lobata HOM05D000861 ORTHO05D004749 2.6e-132 476.1 351 66.7
Lj2A1153T47 Lonicera japonica HOM05D000861 ORTHO05D004749 3.4e-132 475.7 331 66.8
Lalb_Chr20g0111111 Lupinus albus HOM05D000861 ORTHO05D004749 3.4e-132 475.7 348 64.9
Manes.09G040600 Manihot esculenta HOM05D000861 ORTHO05D004749 1.3e-131 473.8 310 71.6
Cc09_g02090 Coffea canephora HOM05D000861 ORTHO05D004749 1.7e-131 473.4 349 66.2
THA.LOC104826781 Tarenaya hassleriana HOM05D000861 ORTHO05D004749 2.9e-131 472.6 343 66.8
TAR636G3394 Trochodendron aralioides HOM05D000861 ORTHO05D004749 3.8e-131 472.2 349 65.3
Cfa006350 Carpinus fangiana HOM05D000861 ORTHO05D004749 1.4e-130 470.3 349 65.0
Lalb_Chr25g0287681 Lupinus albus HOM05D000861 ORTHO05D004749 3.2e-130 469.2 350 64.3
Psat6g110040 Pisum sativum HOM05D000861 ORTHO05D004749 9.4e-130 467.6 349 65.6
RcHm_v2.0_Chr1g0331341 Rosa chinensis HOM05D000861 ORTHO05D004749 1.2e-129 467.2 305 69.8
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 6.1e-129 464.9 354 64.7
Medtr1g054715 Medicago truncatula HOM05D000861 ORTHO05D004749 6.7e-128 461.5 349 64.8
vmacro05483 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 6.7e-128 461.5 356 63.5
Nn2g14698 Nelumbo nucifera HOM05D000861 ORTHO05D004749 8.8e-128 461.1 348 63.8
TPR.G14497 Trifolium pratense HOM05D000861 ORTHO05D004749 8.8e-128 461.1 347 65.1
Migut.C01187 Erythranthe guttata HOM05D000861 ORTHO05D004749 1.1e-127 460.7 350 63.4
Psat1g222880 Pisum sativum HOM05D000861 ORTHO05D004749 1.5e-127 460.3 349 62.5
TPR.G29255 Trifolium pratense HOM05D000861 ORTHO05D004749 3.3e-127 459.1 354 63.3
Hma1.2p1_0636F.1_g193240 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 4.4e-127 458.8 306 68.6
CsaV3_4G031490 Cucumis sativus L. HOM05D000861 ORTHO05D004749 7.4e-127 458.0 349 63.9
Glyma.03G206500 Glycine max HOM05D000861 ORTHO05D004749 7.4e-127 458.0 349 63.9
TPR.G2104 Trifolium pratense HOM05D000861 ORTHO05D004749 9.7e-127 457.6 354 62.7
VMungo1383G1884 Vigna mungo HOM05D000861 ORTHO05D004749 9.7e-127 457.6 345 63.5
Glyma.19G204100 Glycine max HOM05D000861 ORTHO05D004749 1.3e-126 457.2 349 63.6
CiPaw.10G023500 Carya illinoinensis HOM05D000861 ORTHO05D004749 1.7e-126 456.8 349 65.0
Lalb_Chr01g0017651 Lupinus albus HOM05D000861 ORTHO05D004749 1.7e-126 456.8 350 61.7
GSVIVG01033426001 Vitis vinifera HOM05D000861 ORTHO05D004749 3.1e-125 452.6 349 64.8
ClCG04G000550 Citrullus lanatus HOM05D000861 ORTHO05D004749 9.1e-125 451.1 349 64.5
Lj1A65T56 Lonicera japonica HOM05D000861 ORTHO05D004749 9.1e-125 451.1 344 62.5
PGSC0003DMG400002212 Solanum tuberosum HOM05D000861 ORTHO05D004749 2.9e-123 446.0 349 61.0
Glyma.02G168400 Glycine max HOM05D000861 ORTHO05D004749 5.0e-123 445.3 350 62.0
TAR633G2067 Trochodendron aralioides HOM05D000861 ORTHO05D004749 6.5e-123 444.9 351 61.5
Aqoxy4G02829 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 1.4e-122 443.7 338 63.6
Sopen04g019180 Solanum pennellii HOM05D000861 ORTHO05D004749 1.9e-122 443.4 349 61.3
Solyc04g049290.2 Solanum lycopersicum HOM05D000861 ORTHO05D004749 7.2e-122 441.4 349 61.3
Ciclev10012217m.g Citrus clementina HOM05D000861 ORTHO05D004749 9.4e-122 441.0 315 66.3
SGA_v2.0_scaffold274G46507 Striga asiatica HOM05D000861 ORTHO05D004749 9.4e-122 441.0 348 60.3
Eucgr.A02509 Eucalyptus grandis HOM05D000861 ORTHO05D004749 4.7e-121 438.7 333 62.2
arahy.Tifrunner.gnm1.ann1.BI8ZDZ Arachis hypogaea HOM05D000861 ORTHO05D004749 6.7e-120 434.9 351 58.7
arahy.Tifrunner.gnm1.ann1.9W4D6L Arachis hypogaea HOM05D000861 ORTHO05D004749 8.8e-120 434.5 351 58.7
BcaB06g25559 Brassica carinata HOM05D000861 ORTHO05D004749 1.1e-119 434.1 342 60.2
Hma1.2p1_0516F.1_g170530 Hydrangea macrophylla HOM05D000861 ORTHO05D004749 2.8e-118 429.5 350 60.6
PGR004G1046 Punica granatum HOM05D000861 ORTHO05D004749 2.8e-118 429.5 342 61.4
Peaxi162Scf00072g00619 Petunia axillaris HOM05D000861 ORTHO05D004749 4.8e-118 428.7 349 60.5
arahy.Tifrunner.gnm1.ann1.2N6KDB Arachis hypogaea HOM05D000861 ORTHO05D004749 6.3e-118 428.3 338 60.1
Nitab4.5_0000575g0240 Nicotiana tabacum HOM05D000861 ORTHO05D004749 1.1e-117 427.6 346 60.4
arahy.Tifrunner.gnm1.ann1.5F6CY5 Arachis hypogaea HOM05D000861 ORTHO05D004749 2.4e-117 426.4 338 59.5
AUR62025238 Chenopodium quinoa HOM05D000861 ORTHO05D004749 3.1e-117 426.0 336 60.4
ECA234G4058 Erigeron canadensis HOM05D000861 ORTHO05D004749 7.0e-117 424.9 340 58.2
Nn5g30627 Nelumbo nucifera HOM05D000861 ORTHO05D004749 9.1e-117 424.5 339 60.5
MBI01_g21127_MAGBIO Magnolia biondii HOM05D000861 ORTHO05D004749 2.6e-116 422.9 336 61.0
HanXRQChr12g0359061 Helianthus annuus HOM05D000861 ORTHO05D004749 3.5e-116 422.5 353 56.9
Aqoxy2G01335 Aquilegia oxysepala HOM05D000861 ORTHO05D004749 2.2e-115 419.9 334 59.9
VMungo0720G2154 Vigna mungo HOM05D000861 ORTHO05D004749 1.1e-114 417.5 352 56.8
MD02G1263700 Malus domestica HOM05D000861 ORTHO05D004749 1.9e-114 416.8 339 61.1
PGSC0003DMG400016019 Solanum tuberosum HOM05D000861 ORTHO05D004749 7.2e-114 414.8 334 59.9
Ca_26442_v3 Cicer arietinum L. HOM05D000861 ORTHO05D004749 9.4e-114 414.5 310 63.2
MD07G1054500 Malus domestica HOM05D000861 ORTHO05D004749 1.6e-113 413.7 341 60.4
BcaC05g29310 Brassica carinata HOM05D000861 ORTHO05D004749 2.1e-113 413.3 350 57.7
unitig_749.g14024 Utricularia gibba HOM05D000861 ORTHO05D004749 2.1e-113 413.3 323 60.7
PSO384G1311 Papaver somniferum HOM05D000861 ORTHO05D004749 3.6e-113 412.5 335 60.3
Thecc.05G180600 Theobroma cacao HOM05D000861 ORTHO05D004749 1.4e-112 410.6 347 60.2
CAN.G186.36 Capsicum annuum HOM05D000861 ORTHO05D004749 2.3e-112 409.8 336 58.0
A05p37430 Brassica napus HOM05D000861 ORTHO05D007385 3.0e-112 409.5 340 57.6
BraA05t22541Z Brassica rapa HOM05D000861 ORTHO05D007385 3.0e-112 409.5 340 57.6
Atru.chr8.1223 Acer truncatum HOM05D000861 ORTHO05D004749 4.0e-112 409.1 350 58.9
Sed0004581 Sechium edule HOM05D000861 ORTHO05D004749 4.0e-112 409.1 339 59.3
Peaxi162Scf00195g00910 Petunia axillaris HOM05D000861 ORTHO05D004749 8.8e-112 407.9 339 57.5
Duzib128G1936 Durio zibethinus HOM05D000861 ORTHO05D004749 2.0e-111 406.8 348 58.0
C05p55990 Brassica napus HOM05D000861 ORTHO05D004749 2.6e-111 406.4 350 56.9
Nitab4.5_0007421g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 2.6e-111 406.4 346 58.1
Phvul.007G262800 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 5.7e-111 405.2 349 56.7
Sopen04g004750 Solanum pennellii HOM05D000861 ORTHO05D004749 1.7e-110 403.7 331 58.9
Solyc04g009600.3 Solanum lycopersicum HOM05D000861 ORTHO05D004749 2.2e-110 403.3 331 58.9
Duzib093G1597 Durio zibethinus HOM05D000861 ORTHO05D004749 8.3e-110 401.4 350 58.0
Phvul.001G200100 Phaseolus vulgaris HOM05D000861 ORTHO05D004749 1.1e-109 401.0 310 61.6
Lsat_1_v5_gn_2_66000 Lactuca sativa HOM05D000861 ORTHO05D004749 2.4e-109 399.8 327 57.5
vmacro22548 Vaccinium macrocarpon HOM05D000861 ORTHO05D004749 7.0e-109 398.3 356 57.0
BcaB04g18704 Brassica carinata HOM05D000861 ORTHO05D004749 3.5e-108 396.0 268 67.9
Aa31LG3G5570 Aethionema arabicum HOM05D000861 ORTHO05D004749 1.7e-107 393.7 337 57.6
MSTRG.26071 Avicennia marina HOM05D000861 ORTHO05D004749 9.4e-106 387.9 349 55.9
COL.COLO4_29438 Corchorus olitorius HOM05D000861 ORTHO05D004749 2.1e-105 386.7 348 56.0
Dinv24029 Davidia involucrata HOM05D000861 ORTHO05D004749 2.1e-105 386.7 248 73.0
AL3G23550 Arabidopsis lyrata HOM05D000861 ORTHO05D004749 2.7e-105 386.3 348 54.9
AT3G11950 Arabidopsis thaliana HOM05D000861 ORTHO05D004749 6.1e-105 385.2 348 54.9
CARHR086500 Cardamine hirsuta HOM05D000861 ORTHO05D004749 1.8e-104 383.6 354 55.1
Thhalv10020413m.g Eutrema salsugineum HOM05D000861 ORTHO05D004749 3.0e-104 382.9 348 55.2
Nitab4.5_0008820g0010 Nicotiana tabacum HOM05D000861 ORTHO05D004749 3.0e-104 382.9 334 56.3
Carub.0003s1128 Capsella rubella HOM05D000861 ORTHO05D004749 4.0e-104 382.5 348 54.3
AUR62028947 Chenopodium quinoa HOM05D000861 ORTHO05D004749 6.8e-104 381.7 388 50.8
Lj5g0002775 Lotus japonicus HOM05D000861 ORTHO05D004749 8.8e-104 381.3 350 56.0
Oeu022105.1 Olea europaea HOM05D000861 ORTHO05D004749 2.6e-103 379.8 349 56.2
EL10Ac8g19073 Beta vulgaris HOM05D000861 ORTHO05D004749 4.4e-103 379.0 336 54.5
Oeu003219.1 Olea europaea HOM05D000861 ORTHO05D004749 1.3e-102 377.5 349 55.9
Gohir.A09G130700 Gossypium hirsutum HOM05D000861 ORTHO05D004749 1.7e-102 377.1 344 55.2
DCAR_027450 Daucus carota HOM05D000861 ORTHO05D004749 2.3e-99 366.7 277 62.5
BraA03t12899Z Brassica rapa HOM05D000861 ORTHO05D004749 1.9e-98 363.6 338 52.1
Gohir.D01G123600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 3.3e-98 362.8 341 53.7
ATR0789G014 Amborella trichopoda HOM05D000861 ORTHO05D004749 9.5e-98 361.3 309 53.7
CDE05G2486 Ceratophyllum demersum HOM05D000861 ORTHO05D004749 2.1e-97 360.1 334 53.9
Gorai.002G154600 Gossypium raimondii HOM05D000861 ORTHO05D004749 2.1e-97 360.1 341 53.4
Oeu051191.1 Olea europaea HOM05D000861 ORTHO05D004749 4.7e-97 359.0 357 52.4
BcaC01g04070 Brassica carinata HOM05D000861 ORTHO05D007385 6.1e-97 358.6 337 52.5
A03p37380 Brassica napus HOM05D000861 ORTHO05D004749 6.1e-97 358.6 338 51.5
BolC3t16804H Brassica oleracea HOM05D000861 ORTHO05D004749 6.1e-97 358.6 337 52.5
Gohir.A01G136400 Gossypium hirsutum HOM05D000861 ORTHO05D004749 2.3e-96 356.7 341 53.1
C03p45380 Brassica napus HOM05D000861 ORTHO05D004749 9.8e-95 351.3 338 52.1
Sc13g0002540 Simmondsia chinensis HOM05D000861 ORTHO05D004749 6.3e-94 348.6 340 51.8
PSO425G0018 Papaver somniferum HOM05D000861 ORTHO05D004749 2.4e-93 346.7 282 60.3
Gohir.D09G126600 Gossypium hirsutum HOM05D000861 ORTHO05D004749 8.6e-91 338.2 273 59.0
Cpa.g.sc85.15 Carica papaya HOM05D000861 ORTHO05D004749 4.3e-90 335.9 348 52.3
Ah.09g231540 Amaranthus hybridus HOM05D000861 ORTHO05D004749 4.0e-88 329.3 336 50.0
SHI28323 Sapria himalayana HOM05D000861 ORTHO05D004749 4.4e-87 325.9 322 48.8
Nitab4.5_0000691g0150 Nicotiana tabacum HOM05D000861 ORTHO05D004749 7.0e-85 318.5 323 50.8
Os02g0605500 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 7.8e-76 288.5 324 43.8
Zm00001eb246660 Zea mays HOM05D000861 ORTHO05D004749 5.1e-75 285.8 326 42.9
Gorai.006G145500 Gossypium raimondii HOM05D000861 ORTHO05D004749 1.2e-73 281.2 273 51.6
Actinidia01592 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.2e-71 274.6 228 59.2
Mapoly0057s0035 Marchantia polymorpha HOM05D000861 ORTHO05D004749 3.7e-70 269.6 315 41.0
Zm00001eb195790 Zea mays HOM05D000861 ORTHO05D004749 7.1e-69 265.4 333 43.5
Os12g0181300 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 8.6e-67 258.5 336 40.2
Zm00001eb421970 Zea mays HOM05D000861 ORTHO05D004749 1.6e-65 254.2 290 45.5
Os04g0218900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 2.1e-65 253.8 336 39.9
Os05g0305200 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 1.1e-64 251.5 336 39.9
AagrBONN_evm.TU.Sc2ySwM_228.1074 Anthoceros agrestis HOM05D000861 ORTHO05D004749 6.4e-62 242.3 338 36.7
Pp3c24_6130 Physcomitrium patens HOM05D000861 ORTHO05D004749 4.6e-60 236.1 313 39.0
Pp3c13_13880 Physcomitrium patens HOM05D000861 ORTHO05D004749 1.5e-58 231.1 266 38.0
CBR_g23522 Chara braunii HOM05D000861 ORTHO05D004749 1.6e-57 227.6 271 39.5
SEGI_19220 Sequoiadendron giganteum HOM05D000861 ORTHO05D004749 1.6e-57 227.6 271 40.6
HPP92_008306 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.8e-56 224.2 210 50.5
Zm00001eb093630 Zea mays HOM05D000861 ORTHO05D004749 1.6e-52 211.1 327 38.5
SMO358G0316 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 3.0e-51 206.8 326 34.0
SMO194G0050 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 8.7e-51 205.3 321 33.3
HPP92_003821 Vanilla planifolia HOM05D000861 ORTHO05D004749 3.6e-49 199.9 191 48.2
Actinidia17295 Actinidia chinensis HOM05D000861 ORTHO05D004749 6.4e-46 189.1 241 43.6
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.2e-44 184.9 135 66.7
Os04g0217900 Oryza sativa ssp. japonica HOM05D000861 ORTHO05D004749 7.9e-44 182.2 171 50.9
SalBow6G1870 Salvia bowleyana HOM05D000861 ORTHO05D004749 1.4e-40 171.4 129 63.6
TAR626G1779 Trochodendron aralioides HOM05D000861 ORTHO05D004749 4.5e-39 166.4 118 68.6
HPP92_003796 Vanilla planifolia HOM05D000861 ORTHO05D004749 1.3e-35 154.8 158 48.7
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 3.1e-32 143.7 109 61.5
Nitab4.5_0000691g0180 Nicotiana tabacum HOM05D000861 ORTHO05D004749 5.8e-31 139.4 164 42.1
TAR375G0848 Trochodendron aralioides HOM05D000861 ORTHO05D004749 3.2e-29 133.7 81 70.4
SMO361G0253 Selaginella moellendorffii HOM05D000861 ORTHO05D004749 4.6e-28 129.8 259 31.7
RcHm_v2.0_Chr3g0486361 Rosa chinensis HOM05D000861 ORTHO05D004749 6.1e-28 129.4 88 64.8
MCO14G045 Micromonas commoda HOM05D000861 ORTHO05D004749 6.1e-20 102.8 249 25.7
HPP92_003822 Vanilla planifolia HOM05D000861 ORTHO05D004749 9.7e-18 95.5 100 46.0
RcHm_v2.0_Chr3g0486481 Rosa chinensis HOM05D000861 ORTHO05D004749 2.2e-17 94.4 60 70.0
RcHm_v2.0_Chr3g0486371 Rosa chinensis HOM05D000861 ORTHO05D004749 3.8e-14 83.6 74 55.4
Actinidia38607 Actinidia chinensis HOM05D000861 ORTHO05D004749 1.1e-13 82.0 103 45.6
PRCOL_00002048 Prasinoderma coloniale HOM05D000861 ORTHO05D004749 1.3e-09 68.6 223 23.8
CBR_g6735 Chara braunii HOM05D013604 ORTHO05D022303 1.3e-06 58.5 96 30.2
Actinidia30544 Actinidia chinensis HOM05D000861 ORTHO05D038136 2.2e-06 57.8 56 57.1


User provided reference genes

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