Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.3e-98 362.8 279 100.0
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 7.2e-84 314.7 279 89.6
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 6.3e-72 275.0 279 83.5
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 1.6e-54 217.2 281 73.3
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 1.7e-48 197.2 280 71.4
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 5.4e-47 192.2 276 69.6
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 7.0e-47 191.8 283 71.0
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 7.0e-47 191.8 282 67.0
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 5.9e-46 188.7 281 61.2
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 7.7e-46 188.3 282 67.4
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 7.7e-46 188.3 282 69.1
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 1.7e-45 187.2 279 67.7
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 8.6e-45 184.9 286 67.8
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 2.5e-44 183.3 285 65.6
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 3.0e-42 176.4 290 64.5
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 9.8e-41 171.4 281 65.1
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 1.7e-40 170.6 280 69.6
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 1.1e-39 167.9 281 68.0
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 1.4e-39 167.5 285 60.7
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 1.4e-39 167.5 283 67.1
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 1.8e-39 167.2 284 60.6
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 1.8e-39 167.2 281 68.3
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 9.2e-39 164.9 279 65.9
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 1.6e-38 164.1 284 66.2
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 2.7e-38 163.3 280 64.6
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 2.7e-38 163.3 284 59.5
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 5.9e-38 162.2 265 66.4
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 1.3e-37 161.0 282 65.2
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 2.3e-37 160.2 238 73.5
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 3.8e-37 159.5 287 64.8
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 5.0e-37 159.1 286 66.8
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 6.6e-37 158.7 290 64.5
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 6.6e-37 158.7 281 62.3
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 1.1e-36 157.9 283 58.7
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 1.5e-36 157.5 284 57.4
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 1.9e-36 157.1 281 61.9
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.9e-36 157.1 283 58.3
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.9e-36 157.1 283 58.3
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 1.9e-36 157.1 284 57.4
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 5.6e-36 155.6 279 65.6
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 5.6e-36 155.6 280 66.4
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 5.6e-36 155.6 280 62.9
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 5.6e-36 155.6 279 64.2
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 7.3e-36 155.2 282 63.1
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 1.6e-35 154.1 282 59.2
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 2.1e-35 153.7 289 64.4
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 2.1e-35 153.7 266 63.9
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 2.1e-35 153.7 279 64.2
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 2.1e-35 153.7 242 66.5
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 3.6e-35 152.9 284 48.9
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 4.7e-35 152.5 280 63.6
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 6.1e-35 152.1 260 53.5
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 2.3e-34 150.2 280 66.1
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 3.0e-34 149.8 280 63.6
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 3.0e-34 149.8 320 57.8
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 1.2e-33 147.9 286 65.4
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 1.5e-33 147.5 279 63.4
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 3.4e-33 146.4 287 63.8
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 1.3e-32 144.4 278 64.7
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 1.3e-32 144.4 282 62.8
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 1.1e-31 141.4 289 64.0
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 3.2e-31 139.8 280 61.1
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 4.1e-31 139.4 311 49.5
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 5.4e-31 139.0 285 60.0
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 1.2e-30 137.9 242 70.2
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 1.2e-30 137.9 280 61.1
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 1.2e-30 137.9 280 58.2
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.2e-30 137.9 284 62.3
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 7.8e-30 135.2 280 37.9
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 1.0e-29 134.8 149 68.5
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 1.0e-29 134.8 284 58.8
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 1.3e-29 134.4 280 63.6
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.3e-29 134.4 283 55.8
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 3.9e-29 132.9 129 75.2
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 8.6e-29 131.7 255 57.3
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 1.9e-28 130.6 268 57.5
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 3.3e-28 129.8 274 63.5
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 4.7e-27 125.9 155 55.5
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 6.2e-27 125.6 105 72.4
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 8.0e-27 125.2 149 67.8
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 5.2e-26 122.5 282 54.3
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 8.9e-26 121.7 155 68.4
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 2.6e-25 120.2 276 63.4
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 5.8e-25 119.0 237 64.6
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 9.8e-25 118.2 100 66.0
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 9.8e-25 118.2 100 66.0
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 2.2e-24 117.1 278 61.2
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 2.9e-24 116.7 276 60.9
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 5.4e-23 112.5 292 51.0
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 5.4e-23 112.5 308 48.4
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 1.2e-22 111.3 281 60.5
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 4.6e-22 109.4 101 62.4
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 2.3e-21 107.1 302 49.3
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 2.6e-17 93.6 287 53.7
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 3.4e-17 93.2 282 55.0
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 7.5e-17 92.0 282 55.0
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.9e-15 87.4 280 37.5
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 5.4e-15 85.9 140 71.4
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 5.4e-15 85.9 102 52.9
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 7.1e-15 85.5 290 55.5
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 8.1e-11 72.0 101 49.5
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 4.4e-09 66.2 43 65.1
CSS0015725 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 7.6e-09 65.5 62 58.1
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 1.3e-08 64.7 198 54.0
arahy.Tifrunner.gnm1.ann1.4PMG8D Arachis hypogaea HOM05D000368 ORTHO05D009348 3.8e-08 63.2 84 47.6
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 3.2e-07 60.1 39 61.5
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 7.1e-07 58.9 45 53.3
Dinv28434 Davidia involucrata HOM05D000368 ORTHO05D000289 9.2e-07 58.5 63 50.8
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 1.2e-06 58.2 38 60.5


User provided reference genes

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