Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G110132 Populus trichocarpa HOM05D000439 ORTHO05D006154 1.2e-182 643.3 366 100.0
Sabra15G0132200 Salix brachista HOM05D000439 ORTHO05D006154 2.8e-160 568.9 366 89.9
Manes.06G128900 Manihot esculenta HOM05D000439 ORTHO05D006154 2.7e-75 286.6 322 54.7
Manes.14G042300 Manihot esculenta HOM05D000439 ORTHO05D006154 2.1e-59 233.8 319 48.9
TWI23G1133 Tripterygium wilfordii HOM05D000439 ORTHO05D006154 6.6e-53 212.2 317 44.2
Dinv23249 Davidia involucrata HOM05D000439 ORTHO05D006154 9.5e-52 208.4 321 44.2
GSVIVG01014065001 Vitis vinifera HOM05D000439 ORTHO05D006154 1.0e-45 188.3 327 40.1
TWI14G1070 Tripterygium wilfordii HOM05D000439 ORTHO05D006154 1.1e-44 184.9 323 42.1
QL10p000140 Quercus lobata HOM05D000439 ORTHO05D006154 1.0e-42 178.3 308 38.3
Ciclev10032109m.g Citrus clementina HOM05D000439 ORTHO05D006154 1.4e-42 177.9 329 38.6
Thecc.03G143900 Theobroma cacao HOM05D000439 ORTHO05D006154 2.6e-41 173.7 319 40.1
COL.COLO4_37292 Corchorus olitorius HOM05D000439 ORTHO05D006154 5.8e-41 172.6 392 36.5
TAR374G1365 Trochodendron aralioides HOM05D000439 ORTHO05D006154 1.3e-40 171.4 330 40.3
Dinv13691 Davidia involucrata HOM05D000439 ORTHO05D006154 1.2e-38 164.9 344 37.5
VMungo1309G2046 Vigna mungo HOM05D000439 ORTHO05D006154 2.7e-38 163.7 317 39.1
Glyma.04G203400 Glycine max HOM05D000439 ORTHO05D006154 3.5e-38 163.3 317 40.4
Glyma.06G162100 Glycine max HOM05D000439 ORTHO05D006154 6.0e-38 162.5 312 38.8
Phvul.009G159400 Phaseolus vulgaris HOM05D000439 ORTHO05D006154 6.0e-38 162.5 315 38.7
Duzib084G0576 Durio zibethinus HOM05D000439 ORTHO05D006154 3.0e-37 160.2 385 35.3
CSS0035359 Camellia sinensis var. sinensis HOM05D000439 ORTHO05D006154 1.1e-36 158.3 320 36.2
Actinidia08922 Actinidia chinensis HOM05D000439 ORTHO05D006154 2.5e-36 157.1 323 36.8
Duzib205G0088 Durio zibethinus HOM05D000439 ORTHO05D006154 5.6e-36 156.0 320 38.4
Actinidia36853 Actinidia chinensis HOM05D000439 ORTHO05D006154 1.2e-35 154.8 326 36.5
Eucgr.H00244 Eucalyptus grandis HOM05D000439 ORTHO05D006154 2.3e-34 150.6 327 36.1
arahy.Tifrunner.gnm1.ann1.94UTWG Arachis hypogaea HOM05D000439 ORTHO05D006154 4.0e-34 149.8 326 35.3
arahy.Tifrunner.gnm1.ann1.R8UNTY Arachis hypogaea HOM05D000439 ORTHO05D006154 5.2e-34 149.4 326 35.3
Ca_17046_v3 Cicer arietinum L. HOM05D000422 ORTHO05D001248 9.8e-33 145.2 318 38.1
Lalb_Chr11g0068951 Lupinus albus HOM05D000439 ORTHO05D006154 9.8e-33 145.2 331 34.1
Cc04_g05540 Coffea canephora HOM05D000439 ORTHO05D006154 3.7e-32 143.3 330 37.3
TPR.G7812 Trifolium pratense HOM05D000439 ORTHO05D006154 2.3e-29 134.0 318 35.2
Gorai.003G118000 Gossypium raimondii HOM05D000439 ORTHO05D006154 3.9e-29 133.3 312 34.9
Lj1g0000423 Lotus japonicus HOM05D000439 ORTHO05D006154 3.9e-29 133.3 327 35.5
Gohir.A03G055200 Gossypium hirsutum HOM05D000439 ORTHO05D006154 1.9e-28 131.0 311 35.7
Gohir.D03G111600 Gossypium hirsutum HOM05D000439 ORTHO05D006154 3.3e-28 130.2 312 34.6
Aqoxy5G03342 Aquilegia oxysepala HOM05D000439 ORTHO05D006154 4.3e-28 129.8 316 35.8
Atru.chr6.1963 Acer truncatum HOM05D000439 ORTHO05D006154 6.2e-27 125.9 192 44.8
TAR622G0766 Trochodendron aralioides HOM05D000439 ORTHO05D006154 1.1e-26 125.2 271 36.9
Medtr3g098290 Medicago truncatula HOM05D000439 ORTHO05D006154 1.8e-26 124.4 317 34.7
Nn3g16172 Nelumbo nucifera HOM05D000439 ORTHO05D006154 1.8e-26 124.4 328 33.5
Migut.I00648 Erythranthe guttata HOM05D000439 ORTHO05D006154 5.2e-26 122.9 311 34.1
Gohir.D07G049801 Gossypium hirsutum HOM05D000439 ORTHO05D006154 5.2e-26 122.9 202 40.1
Gorai.001G052900 Gossypium raimondii HOM05D000439 ORTHO05D006154 5.2e-26 122.9 202 40.6
Nitab4.5_0000976g0310 Nicotiana tabacum HOM05D000439 ORTHO05D006154 8.9e-26 122.1 310 32.6
Gohir.A07G045400 Gossypium hirsutum HOM05D000439 ORTHO05D006154 2.2e-24 117.5 202 39.1
Lalb_Chr23g0272801 Lupinus albus HOM05D000439 ORTHO05D006154 2.9e-24 117.1 201 37.3
CAN.G1008.33 Capsicum annuum HOM05D000439 ORTHO05D006154 3.8e-24 116.7 310 33.9
VMungo1309G0148 Vigna mungo HOM05D000439 ORTHO05D006154 3.8e-24 116.7 149 44.3
Psat5g056000 Pisum sativum HOM05D000439 ORTHO05D006154 2.1e-22 110.9 306 32.7
Nitab4.5_0007669g0030 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.0e-21 108.6 310 31.3
ClCG04G003180 Citrullus lanatus HOM05D000439 ORTHO05D006154 2.3e-21 107.5 197 38.6
Aa31LG3G7580 Aethionema arabicum HOM05D000439 ORTHO05D006154 3.0e-21 107.1 188 37.2
MELO3C003262.2 Cucumis melo HOM05D000439 ORTHO05D006154 3.0e-21 107.1 196 39.3
CAN.G1008.29 Capsicum annuum HOM05D000439 ORTHO05D006154 1.2e-19 101.7 352 30.1
Sp6g13280 Schrenkiella parvula HOM05D000439 ORTHO05D006154 1.2e-19 101.7 196 34.7
Sopen03g036820 Solanum pennellii HOM05D000439 ORTHO05D006154 1.2e-19 101.7 309 30.7
Thhalv10012996m.g Eutrema salsugineum HOM05D000439 ORTHO05D006154 1.6e-19 101.3 244 32.0
Rhsim08G0200600 Rhododendron simsii HOM05D000439 ORTHO05D006154 2.1e-19 100.9 353 28.9
Nitab4.5_0001000g0070 Nicotiana tabacum HOM05D000439 ORTHO05D006154 2.8e-19 100.5 289 30.8
Nitab4.5_0002540g0130 Nicotiana tabacum HOM05D000439 ORTHO05D006154 2.8e-19 100.5 314 30.3
Nitab4.5_0000433g0080 Nicotiana tabacum HOM05D000439 ORTHO05D006154 4.7e-19 99.8 288 29.5
CsaV3_4G029810 Cucumis sativus L. HOM05D000439 ORTHO05D006154 8.1e-19 99.0 236 33.9
Peaxi162Scf00314g00840 Petunia axillaris HOM05D000439 ORTHO05D006154 1.8e-18 97.8 288 31.2
Solyc03g117920.1 Solanum lycopersicum HOM05D000439 ORTHO05D006154 1.8e-18 97.8 349 30.1
BcaC01g06069 Brassica carinata HOM05D000439 ORTHO05D006154 5.2e-18 96.3 204 33.8
C03p19250 Brassica napus HOM05D000439 ORTHO05D006154 5.2e-18 96.3 204 33.8
AL8G25340 Arabidopsis lyrata HOM05D000439 ORTHO05D006154 8.9e-18 95.5 213 32.4
BcaC01g06107 Brassica carinata HOM05D000439 ORTHO05D006154 1.2e-17 95.1 199 33.7
PGSC0003DMG400031151 Solanum tuberosum HOM05D000439 ORTHO05D006154 1.5e-17 94.7 308 28.2
CAN.G919.28 Capsicum annuum HOM05D000439 ORTHO05D006154 3.4e-17 93.6 293 27.6
Nitab4.5_0004781g0040 Nicotiana tabacum HOM05D000439 ORTHO05D006154 5.8e-17 92.8 316 29.1
Peaxi162Scf00091g00516 Petunia axillaris HOM05D000439 ORTHO05D006154 5.8e-17 92.8 229 33.2
BcaB08g35465 Brassica carinata HOM05D000439 ORTHO05D006154 7.6e-17 92.4 181 36.5
CAN.G564.8 Capsicum annuum HOM05D000439 ORTHO05D006154 7.6e-17 92.4 302 28.5
BolC3t14311H Brassica oleracea HOM05D000439 ORTHO05D006154 9.9e-17 92.0 213 32.4
Sopen03g036830 Solanum pennellii HOM05D000439 ORTHO05D006154 9.9e-17 92.0 282 29.8
BraA03t10927Z Brassica rapa HOM05D000439 ORTHO05D006154 1.3e-16 91.7 213 31.9
A03p16370 Brassica napus HOM05D000439 ORTHO05D006154 1.7e-16 91.3 212 32.1
Sed0010080 Sechium edule HOM05D000439 ORTHO05D006154 2.9e-16 90.5 193 35.8
SGA_v2.0_scaffold5G02819 Striga asiatica HOM05D000439 ORTHO05D006154 3.8e-16 90.1 210 34.8
A10p08000 Brassica napus HOM05D000439 ORTHO05D006154 6.4e-16 89.4 182 36.8
BraSC35t45999Z Brassica rapa HOM05D000439 ORTHO05D006154 6.4e-16 89.4 182 36.3
Rhsim12G0182700 Rhododendron simsii HOM05D000439 ORTHO05D006154 6.4e-16 89.4 313 29.4
BcaC04g20734 Brassica carinata HOM05D000439 ORTHO05D006154 8.4e-16 89.0 142 40.1
C09p39760 Brassica napus HOM05D000439 ORTHO05D006154 8.4e-16 89.0 142 40.1
BolC9t56878H Brassica oleracea HOM05D000439 ORTHO05D006154 8.4e-16 89.0 142 40.1
CAN.G1008.30 Capsicum annuum HOM05D000439 ORTHO05D006154 8.4e-16 89.0 134 38.8
Solyc03g117930.4 Solanum lycopersicum HOM05D000439 ORTHO05D006154 8.4e-16 89.0 125 40.8
Carub.0008s1113 Capsella rubella HOM05D000439 ORTHO05D006154 1.4e-15 88.2 196 33.2
Sopen04g028360 Solanum pennellii HOM05D000439 ORTHO05D006154 1.4e-15 88.2 299 28.1
CARHR257000 Cardamine hirsuta HOM05D000439 ORTHO05D006154 4.2e-15 86.7 106 42.5
Peaxi162Scf00091g00051 Petunia axillaris HOM05D000439 ORTHO05D006154 7.1e-15 85.9 264 28.8
Sopen12g021430 Solanum pennellii HOM05D000439 ORTHO05D006154 9.3e-15 85.5 313 28.8
Solyc12g042440.2 Solanum lycopersicum HOM05D000439 ORTHO05D006154 1.2e-14 85.1 313 29.1
PGSC0003DMG400014443 Solanum tuberosum HOM05D000439 ORTHO05D006154 2.7e-14 84.0 318 26.1
CAN.G47.4 Capsicum annuum HOM05D000439 ORTHO05D006154 4.6e-14 83.2 318 25.5
Solyc04g072200.3 Solanum lycopersicum HOM05D000439 ORTHO05D006154 6.0e-14 82.8 299 27.4
Nitab4.5_0012621g0010 Nicotiana tabacum HOM05D000439 ORTHO05D006154 1.0e-13 82.0 301 27.6
DCAR_025619 Daucus carota HOM05D000439 ORTHO05D006154 2.3e-13 80.9 197 29.4
Nitab4.5_0001000g0080 Nicotiana tabacum HOM05D000439 ORTHO05D006154 8.7e-13 79.0 285 27.4
Nitab4.5_0000976g0300 Nicotiana tabacum HOM05D000439 ORTHO05D006154 4.3e-12 76.6 144 35.4
Nitab4.5_0000433g0090 Nicotiana tabacum HOM05D000439 ORTHO05D006154 7.3e-12 75.9 292 27.1
PGSC0003DMG400044295 Solanum tuberosum HOM05D000439 ORTHO05D006154 9.6e-12 75.5 253 26.9
Nitab4.5_0001216g0050 Nicotiana tabacum HOM05D000439 ORTHO05D006154 8.1e-11 72.4 186 31.2
unitig_61.g26220 Utricularia gibba HOM05D000439 ORTHO05D006154 8.1e-11 72.4 303 26.7
MBI07_g11053_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D006154 1.1e-10 72.0 230 28.3
Sopen06g030920 Solanum pennellii HOM05D000439 ORTHO05D006154 1.1e-10 72.0 254 28.0
THA.LOC104808041 Tarenaya hassleriana HOM05D000439 ORTHO05D006154 4.0e-10 70.1 143 31.5
PGSC0003DMG400031150 Solanum tuberosum HOM05D000439 ORTHO05D006154 5.3e-10 69.7 227 28.2
HanXRQChr05g0154491 Helianthus annuus HOM05D000439 ORTHO05D006154 1.2e-09 68.6 146 34.2
MBI11_g04259_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D006154 1.2e-09 68.6 338 27.2
HanXRQChr05g0157581 Helianthus annuus HOM05D000439 ORTHO05D006154 2.6e-09 67.4 104 37.5
Peaxi162Scf00091g00413 Petunia axillaris HOM05D000439 ORTHO05D006154 2.6e-09 67.4 214 29.4
CAN.G919.14 Capsicum annuum HOM05D000439 ORTHO05D006154 3.4e-09 67.0 211 27.5
Peaxi162Scf00091g00412 Petunia axillaris HOM05D000439 ORTHO05D006154 1.3e-08 65.1 230 27.4
MBI19_g33781_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 1.4e-07 61.6 122 32.0
MSTRG.12742 Avicennia marina HOM05D000439 ORTHO05D001363 1.9e-07 61.2 119 35.3
SalBow3G0791 Salvia bowleyana HOM05D000439 ORTHO05D001363 1.9e-07 61.2 119 37.0
MSTRG.18507 Avicennia marina HOM05D000439 ORTHO05D001363 2.4e-07 60.8 118 38.1
ECA246G1416 Erigeron canadensis HOM05D000439 ORTHO05D006154 2.4e-07 60.8 107 33.6
ECA246G4312 Erigeron canadensis HOM05D007610 ORTHO05D009592 2.4e-07 60.8 220 28.2
ECA246G3042 Erigeron canadensis HOM05D000439 ORTHO05D006154 5.4e-07 59.7 136 30.1
Solyc06g074450.3 Solanum lycopersicum HOM05D000439 ORTHO05D006154 5.4e-07 59.7 253 27.7
Migut.D00771 Erythranthe guttata HOM05D000439 ORTHO05D001363 7.1e-07 59.3 119 34.5
MBI14_g17371_MAGBIO Magnolia biondii HOM05D000439 ORTHO05D001363 7.1e-07 59.3 122 31.1
ATR0743G156 Amborella trichopoda HOM05D000439 ORTHO05D001363 9.3e-07 58.9 118 36.4
SalBow3G1228 Salvia bowleyana HOM05D000439 ORTHO05D001363 2.1e-06 57.8 119 34.5
C09p04720 Brassica napus HOM05D000439 ORTHO05D001363 2.7e-06 57.4 118 35.6
BolC9t53400H Brassica oleracea HOM05D000439 ORTHO05D001363 2.7e-06 57.4 118 35.6
Duzib211G0280 Durio zibethinus HOM05D000439 ORTHO05D001363 3.5e-06 57.0 118 35.6
Glyma.16G079100 Glycine max HOM05D000439 ORTHO05D001363 4.6e-06 56.6 118 33.9
MSTRG.17959 Avicennia marina HOM05D000439 ORTHO05D001363 6.0e-06 56.2 119 34.5
Glyma.03G096400 Glycine max HOM05D000439 ORTHO05D001363 6.0e-06 56.2 118 33.9
Lsat_1_v5_gn_5_9321 Lactuca sativa HOM05D000439 ORTHO05D006154 6.0e-06 56.2 103 35.0
Phvul.010G036000 Phaseolus vulgaris HOM05D000439 ORTHO05D001363 6.0e-06 56.2 118 33.1
SGA_v2.0_scaffold77G25310 Striga asiatica HOM05D000439 ORTHO05D001363 6.0e-06 56.2 194 28.4


User provided reference genes

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