Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 2.8e-74 282.0 152 100.0
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 2.7e-61 238.8 131 96.2
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 6.5e-47 191.0 131 76.3
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 1.2e-45 186.8 130 76.9
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 2.7e-45 185.7 134 73.1
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 6.7e-44 181.0 117 80.3
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 1.5e-43 179.9 130 70.8
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 1.5e-43 179.9 123 75.6
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 2.0e-43 179.5 123 75.6
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 3.3e-43 178.7 126 75.4
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 9.7e-43 177.2 121 73.6
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 2.2e-42 176.0 128 74.2
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 2.2e-42 176.0 122 74.6
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 1.1e-41 173.7 131 68.7
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 1.1e-41 173.7 131 68.7
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 2.4e-41 172.6 124 75.8
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 5.3e-41 171.4 128 72.7
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 5.3e-41 171.4 123 71.5
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 7.0e-41 171.0 131 69.5
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 1.6e-40 169.9 129 67.4
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 1.6e-40 169.9 127 66.9
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 4.5e-40 168.3 125 67.2
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 5.9e-40 167.9 125 68.0
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 7.7e-40 167.5 131 66.4
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 7.7e-40 167.5 129 69.0
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 1.0e-39 167.2 118 72.0
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 1.0e-39 167.2 129 69.8
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 1.3e-39 166.8 126 68.3
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 1.7e-39 166.4 126 69.8
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 2.2e-39 166.0 118 71.2
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 2.2e-39 166.0 119 70.6
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 2.9e-39 165.6 136 68.4
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 2.9e-39 165.6 117 72.6
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 5.0e-39 164.9 125 66.4
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 6.5e-39 164.5 125 65.6
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 2.5e-38 162.5 123 70.7
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 5.5e-38 161.4 115 71.3
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 5.5e-38 161.4 127 68.5
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 5.5e-38 161.4 122 70.5
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 5.5e-38 161.4 122 70.5
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 7.2e-38 161.0 114 70.2
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.2e-37 160.2 122 69.7
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.6e-37 159.8 123 67.5
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 3.6e-37 158.7 114 71.9
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 8.0e-37 157.5 125 68.0
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 1.0e-36 157.1 125 68.0
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 2.3e-36 156.0 127 64.6
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 4.0e-36 155.2 118 66.9
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 4.0e-36 155.2 118 66.9
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 4.0e-36 155.2 125 64.0
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 5.2e-36 154.8 118 66.9
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 8.8e-36 154.1 119 66.4
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 1.2e-35 153.7 118 66.9
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 1.2e-35 153.7 118 66.9
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 1.2e-35 153.7 118 66.9
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 1.5e-35 153.3 132 59.8
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 1.5e-35 153.3 118 66.1
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 2.6e-35 152.5 118 66.9
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 2.6e-35 152.5 131 64.9
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 2.6e-35 152.5 133 62.4
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 2.6e-35 152.5 132 61.4
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 3.3e-35 152.1 122 65.6
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 5.7e-35 151.4 120 64.2
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 5.7e-35 151.4 118 66.9
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 5.7e-35 151.4 133 61.7
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 5.7e-35 151.4 132 61.4
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.8e-34 149.1 116 66.4
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 4.8e-34 148.3 133 60.9
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 4.8e-34 148.3 133 57.9
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 1.1e-33 147.1 115 63.5
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 1.1e-33 147.1 127 61.4
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 1.4e-33 146.7 125 62.4
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 5.3e-33 144.8 117 65.8
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 7.0e-33 144.4 113 65.5
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 9.1e-33 144.1 160 52.5
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 2.0e-32 142.9 139 58.3
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 2.0e-32 142.9 115 63.5
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 2.7e-32 142.5 119 61.3
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 2.7e-32 142.5 127 59.8
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 4.5e-32 141.7 126 62.7
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 4.5e-32 141.7 121 60.3
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 7.7e-32 141.0 125 61.6
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 1.0e-31 140.6 122 61.5
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 1.7e-31 139.8 126 61.1
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 2.9e-31 139.0 127 58.3
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 3.8e-31 138.7 158 50.6
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 6.5e-31 137.9 127 57.5
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 8.5e-31 137.5 130 62.3
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 1.1e-30 137.1 124 59.7
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 1.9e-30 136.3 141 55.3
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 1.9e-30 136.3 90 76.7
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 2.5e-30 136.0 130 56.2
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 5.7e-27 124.8 92 69.6
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 9.8e-27 124.0 91 70.3
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 1.3e-26 123.6 132 53.0
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.7e-26 123.2 88 72.7
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 1.7e-26 123.2 88 72.7
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 8.3e-26 120.9 81 71.6
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 7.0e-25 117.9 131 51.9
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 2.0e-24 116.3 90 66.7
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 4.2e-22 108.6 87 64.4
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 5.5e-22 108.2 108 52.8
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 1.2e-21 107.1 88 67.0
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 1.4e-20 103.6 127 46.5
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 5.2e-20 101.7 118 48.3
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 5.7e-19 98.2 80 67.5
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 2.8e-18 95.9 72 70.8
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 4.1e-17 92.0 91 57.1
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 1.3e-15 87.0 100 49.0
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 8.0e-13 77.8 70 61.4
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 4.0e-12 75.5 134 38.1
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 4.4e-11 72.0 114 37.7
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 2.4e-09 66.2 78 51.3
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 7.0e-09 64.7 62 53.2
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 3.3e-06 55.8 95 33.7
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 3.3e-06 55.8 38 68.4


User provided reference genes

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