Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 0.0e+00 1310.0 668 100.0
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 0.0e+00 1195.3 669 93.0
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 9.5e-292 1006.5 729 74.3
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 1.1e-276 956.4 668 72.3
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 2.5e-276 955.3 659 72.4
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 3.3e-276 954.9 671 69.6
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 9.5e-276 953.4 669 73.4
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 2.8e-275 951.8 677 70.2
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 5.2e-274 947.6 669 71.4
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 1.2e-270 936.4 666 70.3
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 9.5e-268 926.8 671 68.9
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 2.0e-265 919.1 669 70.3
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.3e-264 916.4 666 70.3
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 2.9e-264 915.2 675 70.7
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 4.1e-263 911.4 666 70.0
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 2.5e-260 902.1 673 69.5
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 3.3e-260 901.7 669 67.7
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 1.2e-259 899.8 665 68.1
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 1.6e-259 899.4 666 67.6
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 4.7e-259 897.9 667 71.8
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 5.2e-258 894.4 665 67.2
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 4.4e-257 891.3 666 67.3
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 1.3e-256 889.8 670 66.7
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 2.9e-256 888.6 672 66.8
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 2.3e-253 879.0 668 65.4
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 3.0e-253 878.6 668 65.9
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 1.9e-252 875.9 683 65.2
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 1.9e-252 875.9 683 65.2
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.4e-247 859.8 642 67.1
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 4.2e-247 858.2 666 67.3
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 1.2e-246 856.7 666 67.3
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 4.3e-244 848.2 639 66.7
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 1.3e-243 846.7 666 66.7
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 4.8e-243 844.7 667 63.1
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 1.8e-242 842.8 663 65.6
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 2.4e-242 842.4 667 64.0
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 5.3e-242 841.3 666 65.0
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 5.8e-241 837.8 666 65.5
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 9.9e-241 837.0 673 66.9
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 1.9e-239 832.8 667 65.7
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 4.2e-239 831.6 925 49.9
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 5.4e-239 831.2 675 65.8
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 3.0e-237 825.5 663 64.4
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 3.9e-237 825.1 676 66.7
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 1.1e-236 823.5 772 58.2
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 1.3e-235 820.1 670 62.5
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 1.8e-234 816.2 663 62.4
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 2.4e-234 815.8 671 65.4
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 6.9e-234 814.3 679 66.0
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 9.0e-234 813.9 667 63.3
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 2.0e-233 812.8 667 63.0
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 5.8e-233 811.2 671 65.0
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 5.8e-233 811.2 664 61.4
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 7.6e-233 810.8 694 61.5
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 7.6e-233 810.8 665 63.0
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 3.8e-232 808.5 669 60.8
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 4.9e-232 808.1 670 64.6
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 1.1e-231 807.0 670 61.3
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 1.4e-231 806.6 667 62.8
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 1.9e-231 806.2 664 62.7
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 1.9e-231 806.2 670 64.6
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 3.2e-231 805.4 666 61.9
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 9.3e-231 803.9 669 60.8
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 6.0e-230 801.2 668 61.5
Rhsim03G0247300 Rhododendron simsii HOM05D005966 ORTHO05D007584 7.9e-230 800.8 585 68.9
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 2.5e-228 795.8 678 60.2
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 9.6e-228 793.9 665 60.6
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 7.6e-225 784.3 643 66.3
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 2.2e-224 782.7 666 60.1
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 1.1e-223 780.4 676 59.9
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 5.5e-223 778.1 743 54.9
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 1.6e-222 776.5 666 60.5
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 2.5e-215 752.7 668 61.1
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 5.5e-215 751.5 646 59.3
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 3.0e-213 745.7 667 60.1
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 1.9e-212 743.0 674 59.5
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 1.7e-211 740.0 669 59.8
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 3.7e-211 738.8 667 61.6
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 1.1e-210 737.3 636 58.8
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 1.4e-210 736.9 669 59.3
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 1.8e-210 736.5 663 59.0
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 6.9e-210 734.6 664 58.0
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 2.6e-209 732.6 668 59.0
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 3.4e-209 732.3 671 58.7
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 4.5e-209 731.9 669 59.0
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 2.9e-208 729.2 667 58.6
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 7.2e-207 724.5 666 58.0
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 8.8e-205 717.6 668 57.9
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 3.1e-202 709.1 667 57.3
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 5.9e-201 704.9 664 54.4
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 9.4e-199 697.6 661 54.8
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 1.0e-197 694.1 661 54.0
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 2.1e-190 669.8 663 53.1
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 2.2e-187 659.8 690 53.2
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 4.1e-186 655.6 677 51.6
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 7.0e-186 654.8 673 51.1
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 2.7e-182 642.9 635 52.6
Cpa.g.sc75.51 Carica papaya HOM05D005966 ORTHO05D007584 2.8e-179 632.9 491 64.8
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 1.5e-167 594.0 673 48.1
CDE01G0041 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 6.4e-163 578.6 556 54.9
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 6.6e-160 568.5 711 44.6
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 1.9e-159 567.0 674 46.0
Sc08g0006730 Simmondsia chinensis HOM05D005966 ORTHO05D007584 1.6e-150 537.3 526 54.2
unitig_578.g16582 Utricularia gibba HOM05D005966 ORTHO05D007584 8.9e-149 531.6 667 45.0
Zm00001eb334260 Zea mays HOM05D005966 ORTHO05D007584 4.9e-131 472.6 545 47.9
Glyma.14G007400 Glycine max HOM05D005966 ORTHO05D007584 6.5e-99 365.9 303 63.7
COL.COLO4_05778 Corchorus olitorius HOM05D005966 ORTHO05D007584 6.1e-97 359.4 384 52.9
SHI18656 Sapria himalayana HOM05D005966 ORTHO05D007584 8.2e-94 349.0 538 40.7
Mapoly0010s0026 Marchantia polymorpha HOM05D005966 ORTHO05D007584 1.9e-90 337.8 723 33.2
SMO200G0046 Selaginella moellendorffii HOM05D005966 ORTHO05D007584 1.2e-81 308.5 657 30.1
Pp3c3_25450 Physcomitrium patens HOM05D005966 ORTHO05D007584 4.8e-78 296.6 673 31.8
FAN08G0676 Fragaria x ananassa HOM05D005966 ORTHO05D007584 5.4e-61 240.0 170 71.2
TAR625G1387 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.1e-53 215.7 364 39.8
AagrBONN_evm.TU.Sc2ySwM_117.630 Anthoceros agrestis HOM05D005966 ORTHO05D007584 1.5e-47 195.3 481 31.2
Sc08g0006740 Simmondsia chinensis HOM05D005966 ORTHO05D007584 8.3e-46 189.5 143 67.8
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 1.2e-44 185.7 163 57.7
SHI18657 Sapria himalayana HOM05D005966 ORTHO05D007584 4.7e-41 173.7 140 65.0
Cpa.g.sc75.52 Carica papaya HOM05D005966 ORTHO05D007584 2.9e-30 137.9 104 77.9
Aqoxy7G02129 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 2.5e-26 124.8 166 49.4
CBR_g48370 Chara braunii HOM05D005966 ORTHO05D000048 2.5e-26 124.8 344 33.7
Hma1.2p1_0090F.1_g045710 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 9.9e-23 112.8 110 52.7
COL.COLO4_05779 Corchorus olitorius HOM05D005966 ORTHO05D007584 1.2e-20 105.9 58 79.3
CAN.G925.3 Capsicum annuum HOM05D005966 ORTHO05D007584 1.6e-17 95.5 88 54.5
GSVIVG01027692001 Vitis vinifera HOM05D005966 ORTHO05D007584 2.1e-17 95.1 54 77.8
Lsat_1_v5_gn_8_82580 Lactuca sativa HOM05D005966 ORTHO05D007584 2.1e-12 78.6 49 77.6
CAN.G1289.8 Capsicum annuum HOM05D005966 ORTHO05D007584 2.5e-10 71.6 55 60.0
CDE11G0857 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 9.6e-10 69.7 74 48.6
TAR626G0958 Trochodendron aralioides HOM05D005966 ORTHO05D007584 3.1e-08 64.7 37 81.1
TAR362G1246 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.5e-07 62.4 37 78.4
Pp3c19_8370 Physcomitrium patens HOM05D005966 ORTHO05D007584 2.2e-06 58.5 130 32.3


User provided reference genes

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