Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G039300 Populus trichocarpa HOM05D006707 ORTHO05D008243 2.8e-142 510.0 305 100.0
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 3.0e-128 463.4 307 91.9
Sabra15G0057600 Salix brachista HOM05D006707 ORTHO05D008243 6.7e-128 462.2 307 91.5
Sabra15G0070700 Salix brachista HOM05D006707 ORTHO05D008243 1.5e-127 461.1 302 93.0
Sabra15G0038500 Salix brachista HOM05D006707 ORTHO05D008243 1.4e-109 401.4 258 96.1
Manes.06G007500 Manihot esculenta HOM05D006707 ORTHO05D008243 6.3e-86 322.8 308 69.8
Dinv07298 Davidia involucrata HOM05D006707 ORTHO05D008243 1.7e-78 298.1 276 72.8
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 2.8e-78 297.4 259 77.6
Dinv27614 Davidia involucrata HOM05D006707 ORTHO05D008243 2.4e-77 294.3 293 68.9
MD06G1231100 Malus domestica HOM05D006707 ORTHO05D008243 1.2e-76 292.0 309 66.0
GSVIVG01016661001 Vitis vinifera HOM05D006707 ORTHO05D008243 5.5e-74 283.1 292 66.1
Lj5P156T67 Lonicera japonica HOM05D006707 ORTHO05D008243 8.0e-73 279.3 314 64.6
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 1.0e-72 278.9 314 64.0
Nn4g24204 Nelumbo nucifera HOM05D006707 ORTHO05D008243 3.0e-72 277.3 288 68.4
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 6.8e-72 276.2 284 61.3
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 2.6e-71 274.2 280 68.2
Actinidia25143 Actinidia chinensis HOM05D006707 ORTHO05D008243 3.4e-71 273.9 289 66.1
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 7.5e-71 272.7 284 60.9
Cfa019000 Carpinus fangiana HOM05D006707 ORTHO05D008243 9.8e-71 272.3 276 68.1
Rhsim03G0042300 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.8e-70 270.8 280 66.1
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 1.4e-69 268.5 308 63.3
RhsimUnG0220600 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.8e-69 268.1 265 67.9
RhsimUnG0239000 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.8e-69 268.1 290 63.4
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 3.1e-69 267.3 297 58.9
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 5.9e-68 263.1 302 58.3
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 2.3e-67 261.2 260 69.2
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 2.9e-67 260.8 309 62.5
Sc10g0004790 Simmondsia chinensis HOM05D006707 ORTHO05D008243 3.8e-67 260.4 297 64.0
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 8.6e-67 259.2 302 59.9
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 8.6e-67 259.2 302 59.9
MSTRG.16972 Avicennia marina HOM05D006707 ORTHO05D008243 3.3e-66 257.3 272 66.9
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 9.5e-66 255.8 302 56.3
FAN08G3326 Fragaria x ananassa HOM05D006707 ORTHO05D008243 9.5e-66 255.8 305 60.0
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 2.1e-65 254.6 305 60.3
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 3.6e-65 253.8 284 62.0
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 8.0e-65 252.7 307 61.2
Migut.I00309 Erythranthe guttata HOM05D006707 ORTHO05D008243 1.0e-64 252.3 293 61.8
RcHm_v2.0_Chr7g0178541 Rosa chinensis HOM05D006707 ORTHO05D008243 1.0e-64 252.3 310 60.0
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 1.8e-64 251.5 313 60.7
Haze_21123 Corylus avellana HOM05D006707 ORTHO05D008243 6.8e-64 249.6 318 59.7
PSO478G5041 Papaver somniferum HOM05D006707 ORTHO05D008243 8.9e-64 249.2 279 65.9
Oeu010709.1 Olea europaea HOM05D006707 ORTHO05D008243 1.2e-63 248.8 301 58.5
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 3.4e-63 247.3 249 70.7
DCAR_014733 Daucus carota HOM05D006707 ORTHO05D008243 4.4e-63 246.9 258 67.4
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 4.4e-63 246.9 300 60.7
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 6.3e-62 243.0 262 64.1
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 1.4e-61 241.9 285 61.4
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 1.8e-61 241.5 305 61.6
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 4.5e-60 236.9 254 66.5
Aa31LG8G4870 Aethionema arabicum HOM05D006707 ORTHO05D008243 7.8e-60 236.1 277 60.6
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 1.7e-59 235.0 306 58.2
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 1.7e-59 235.0 260 53.5
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 2.3e-59 234.6 301 58.5
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 5.0e-59 233.4 301 58.1
Carub.0003s1773 Capsella rubella HOM05D006707 ORTHO05D008243 8.6e-59 232.6 298 58.1
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 8.6e-59 232.6 305 58.7
BraA05t22012Z Brassica rapa HOM05D006707 ORTHO05D008243 2.5e-58 231.1 297 58.6
AT3G18020 Arabidopsis thaliana HOM05D006707 ORTHO05D008243 4.3e-58 230.3 275 59.6
A05p31810 Brassica napus HOM05D006707 ORTHO05D008243 4.3e-58 230.3 276 61.2
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 4.3e-58 230.3 305 58.4
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 2.1e-57 228.0 277 59.9
BcaC05g28725 Brassica carinata HOM05D006707 ORTHO05D008243 3.6e-57 227.3 273 60.8
BolC5t33562H Brassica oleracea HOM05D006707 ORTHO05D008243 3.6e-57 227.3 273 60.8
AL3G31170 Arabidopsis lyrata HOM05D006707 ORTHO05D008243 8.0e-57 226.1 275 60.0
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 8.0e-57 226.1 275 60.4
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 3.0e-56 224.2 311 57.6
C05p48280 Brassica napus HOM05D006707 ORTHO05D008243 5.2e-56 223.4 273 61.2
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 6.8e-56 223.0 273 60.1
Sp3g16130 Schrenkiella parvula HOM05D006707 ORTHO05D008243 8.9e-56 222.6 277 60.3
THA.LOC104820351 Tarenaya hassleriana HOM05D006707 ORTHO05D008243 8.9e-56 222.6 296 57.4
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 1.2e-55 222.2 252 64.7
BcaB06g25867 Brassica carinata HOM05D006707 ORTHO05D008243 2.0e-55 221.5 280 59.6
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 1.0e-51 209.1 292 56.2
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 1.9e-50 204.9 237 62.0
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 4.3e-50 203.8 282 57.8
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 3.6e-49 200.7 217 66.8
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 5.2e-48 196.8 218 67.9
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 2.2e-46 191.4 225 64.9
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 2.9e-46 191.0 218 67.0
Atru.BG.186.p Acer truncatum HOM05D006707 ORTHO05D008243 4.9e-46 190.3 218 69.3
PGR044G0521 Punica granatum HOM05D006707 ORTHO05D008243 1.1e-45 189.1 231 64.1
TPR.G37093 Trifolium pratense HOM05D006707 ORTHO05D008243 5.4e-45 186.8 227 64.3
TPR.G35815 Trifolium pratense HOM05D006707 ORTHO05D008243 1.6e-44 185.3 224 64.7
CDE07G1516 Ceratophyllum demersum HOM05D006707 ORTHO05D008243 7.8e-44 183.0 260 59.6
Glyma.18G207800 Glycine max HOM05D006707 ORTHO05D008243 1.7e-43 181.8 219 65.8
Lj1g0019371 Lotus japonicus HOM05D006707 ORTHO05D008243 2.5e-42 177.9 219 65.8
PSO017G3187 Papaver somniferum HOM05D006707 ORTHO05D008243 3.3e-42 177.6 163 57.1
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 9.5e-42 176.0 294 52.0
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 4.0e-40 170.6 161 54.7
Phvul.010G093200 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 2.0e-39 168.3 222 63.5
VMungo1383G0390 Vigna mungo HOM05D006707 ORTHO05D008243 9.9e-39 166.0 222 62.6
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 3.7e-38 164.1 247 40.9
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 2.1e-36 158.3 219 58.4
ATR0564G450 Amborella trichopoda HOM05D006707 ORTHO05D008243 1.0e-35 156.0 293 52.2
arahy.Tifrunner.gnm1.ann1.72MQAV Arachis hypogaea HOM05D000449 ORTHO05D008243 5.6e-34 150.2 219 60.7
arahy.Tifrunner.gnm1.ann1.U18B68 Arachis hypogaea HOM05D000449 ORTHO05D008243 4.0e-32 144.1 218 60.1
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 1.2e-31 142.5 218 59.6
QL11p014441 Quercus lobata HOM05D006707 ORTHO05D008243 6.6e-27 126.7 127 55.1
SEGI_24072 Sequoiadendron giganteum HOM05D006707 ORTHO05D008243 6.6e-27 126.7 254 51.6
Ciclev10024364m.g Citrus clementina HOM05D006707 ORTHO05D008243 8.1e-17 93.2 68 67.6
Os07g0674300 Oryza sativa ssp. japonica HOM05D006707 ORTHO05D008243 8.4e-14 83.2 244 33.2
Zm00001eb111370 Zea mays HOM05D006707 ORTHO05D008243 1.4e-13 82.4 229 29.3
ECA246G2801 Erigeron canadensis HOM05D006707 ORTHO05D008243 1.0e-11 76.3 68 54.4
HanXRQChr10g0277831 Helianthus annuus HOM05D006707 ORTHO05D008243 5.1e-11 73.9 185 28.1
arahy.Tifrunner.gnm1.ann1.55ENF0 Arachis hypogaea HOM05D006707 ORTHO05D008243 2.5e-10 71.6 141 32.6
CSS0017365 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 4.3e-10 70.9 60 60.0
CSS0026236 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 4.3e-10 70.9 60 60.0
PSO017G4261 Papaver somniferum HOM05D006707 ORTHO05D008243 4.3e-10 70.9 48 66.7
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.1e-09 68.6 56 57.1
FAN13G2143 Fragaria x ananassa HOM05D006707 ORTHO05D008243 4.0e-08 64.3 49 59.2


User provided reference genes

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