Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 1.3e-82 309.7 161 100.0
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 2.4e-76 288.9 161 93.2
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 2.6e-54 215.7 161 72.7
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 4.5e-54 214.9 133 78.2
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 3.8e-53 211.8 146 72.6
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 6.4e-53 211.1 158 69.6
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 1.1e-52 210.3 162 68.5
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 2.4e-52 209.1 132 76.5
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 4.2e-52 208.4 130 78.5
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 4.2e-52 208.4 163 68.1
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 6.0e-51 204.5 139 76.3
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 7.9e-51 204.1 132 76.5
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 1.0e-50 203.8 196 59.7
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.3e-50 203.4 167 65.9
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 2.3e-50 202.6 147 68.7
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 5.1e-50 201.4 167 65.9
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 6.7e-50 201.1 146 68.5
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 6.7e-50 201.1 153 69.9
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 8.7e-50 200.7 162 65.4
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 8.7e-50 200.7 163 67.5
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 1.5e-49 199.9 149 68.5
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 3.3e-49 198.7 131 74.0
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 4.3e-49 198.4 154 68.2
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 5.6e-49 198.0 138 69.6
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 9.6e-49 197.2 130 73.1
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 1.3e-48 196.8 153 67.3
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 1.6e-48 196.4 134 76.9
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 1.1e-47 193.7 138 68.8
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 1.8e-47 193.0 141 69.5
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 1.8e-47 193.0 132 72.0
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 3.1e-47 192.2 167 64.7
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 5.3e-47 191.4 119 79.8
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 9.0e-47 190.7 140 67.1
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 2.6e-46 189.1 140 66.4
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 2.6e-46 189.1 140 66.4
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 2.6e-46 189.1 140 66.4
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 2.6e-46 189.1 140 66.4
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 4.5e-46 188.3 168 64.9
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 5.8e-46 188.0 161 62.1
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 7.6e-46 187.6 125 79.2
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 9.9e-46 187.2 118 75.4
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 1.3e-45 186.8 140 65.7
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 1.3e-45 186.8 167 63.5
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 2.2e-45 186.0 161 62.1
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 2.9e-45 185.7 171 63.7
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 2.9e-45 185.7 161 62.7
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 2.9e-45 185.7 171 62.0
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 3.8e-45 185.3 155 60.6
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 6.4e-45 184.5 162 62.3
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 8.4e-45 184.1 135 66.7
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 2.4e-44 182.6 135 65.9
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 2.4e-44 182.6 164 60.4
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 2.4e-44 182.6 167 61.7
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 3.2e-44 182.2 154 61.0
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 3.2e-44 182.2 109 79.8
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 5.5e-44 181.4 167 61.7
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 7.1e-44 181.0 136 66.2
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 9.3e-44 180.6 154 61.7
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 6.0e-43 177.9 120 73.3
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 1.3e-42 176.8 109 79.8
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 1.3e-42 176.8 159 60.4
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 2.3e-42 176.0 165 58.2
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 3.0e-42 175.6 127 69.3
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 1.5e-41 173.3 173 61.3
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 1.5e-41 173.3 163 56.4
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 4.3e-41 171.8 135 67.4
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 5.6e-41 171.4 103 79.6
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.3e-40 170.2 137 63.5
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 2.8e-40 169.1 168 58.3
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 3.7e-40 168.7 106 76.4
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 4.8e-40 168.3 119 66.4
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 1.4e-39 166.8 169 59.8
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 1.4e-39 166.8 108 75.0
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 3.1e-39 165.6 134 63.4
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 5.3e-39 164.9 98 79.6
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 5.3e-39 164.9 98 79.6
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 2.0e-38 162.9 156 57.1
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 3.4e-38 162.2 104 71.2
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 6.5e-37 157.9 132 60.6
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.2e-35 153.7 108 71.3
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 1.6e-35 153.3 111 66.7
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 1.6e-35 153.3 122 59.8
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 2.1e-35 152.9 105 71.4
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 2.1e-35 152.9 118 62.7
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 2.7e-35 152.5 122 59.0
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.3e-34 150.2 150 60.7
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 1.8e-34 149.8 159 55.3
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 3.9e-34 148.7 166 53.6
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 5.1e-34 148.3 109 67.0
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 7.4e-33 144.4 125 57.6
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 6.3e-32 141.4 122 59.8
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 1.4e-31 140.2 155 52.3
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 1.8e-31 139.8 169 47.9
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 5.9e-30 134.8 100 72.0
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 2.5e-28 129.4 150 52.7
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 7.2e-28 127.9 97 63.9
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 1.8e-26 123.2 87 69.0
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 1.5e-17 93.6 81 59.3
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 3.2e-12 75.9 85 57.6
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 3.6e-11 72.4 69 56.5
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 1.8e-07 60.1 104 35.6


User provided reference genes

Program Settings