Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.8e-279 965.3 492 100.0
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.2e-272 942.6 492 98.0
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 1.3e-253 879.4 492 90.7
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 1.5e-190 669.8 495 68.5
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 7.4e-177 624.4 494 66.4
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 9.1e-175 617.5 489 63.8
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 2.9e-173 612.5 496 64.5
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 2.3e-170 602.8 495 63.4
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 3.7e-168 595.5 477 65.6
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 4.8e-168 595.1 482 63.1
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 6.3e-168 594.7 495 63.0
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 5.3e-167 591.7 470 64.9
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 7.0e-167 591.3 498 60.8
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 1.6e-166 590.1 497 61.4
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.6e-166 590.1 498 60.8
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 2.7e-166 589.3 421 70.3
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 5.0e-165 585.1 495 61.4
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.1e-164 583.9 498 60.4
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 2.5e-164 582.8 498 60.4
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 5.5e-164 581.6 482 61.8
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 2.1e-163 579.7 464 64.7
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 2.1e-163 579.7 496 60.9
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 1.8e-162 576.6 494 59.9
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 4.0e-162 575.5 563 56.7
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 4.0e-162 575.5 421 67.0
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 9.8e-161 570.9 491 59.7
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 8.3e-160 567.8 418 66.3
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 1.3e-157 560.5 422 65.6
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 6.6e-157 558.1 456 62.5
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 8.6e-157 557.8 420 65.2
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 1.5e-156 557.0 420 65.7
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 2.5e-156 556.2 422 65.2
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 3.3e-156 555.8 477 58.5
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 2.1e-155 553.1 473 59.6
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 4.7e-155 552.0 420 65.0
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.4e-154 550.4 466 60.9
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 1.8e-154 550.1 421 62.7
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 6.8e-154 548.1 434 63.1
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 6.8e-154 548.1 490 55.9
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 6.8e-154 548.1 421 62.2
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 8.9e-154 547.7 442 62.4
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 8.9e-154 547.7 513 56.1
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.2e-153 547.4 422 64.0
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 3.4e-153 545.8 442 62.4
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 3.4e-153 545.8 414 65.7
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 9.8e-153 544.3 453 61.8
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 1.7e-152 543.5 478 56.3
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 1.7e-152 543.5 421 64.1
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 4.9e-152 542.0 494 55.7
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 8.3e-152 541.2 422 64.2
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 1.4e-151 540.4 437 59.0
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 1.4e-151 540.4 460 60.4
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 5.4e-151 538.5 420 62.1
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 2.0e-150 536.6 414 64.7
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 2.0e-150 536.6 434 61.8
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 2.7e-150 536.2 418 65.1
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 4.5e-150 535.4 417 64.0
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 2.9e-149 532.7 419 62.8
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 3.9e-149 532.3 417 62.6
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 5.0e-149 531.9 483 59.4
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 5.0e-149 531.9 466 59.2
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 6.6e-149 531.6 492 55.7
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 6.6e-149 531.6 423 61.9
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 1.9e-148 530.0 419 62.8
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 1.9e-148 530.0 419 62.8
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 1.6e-147 526.9 445 60.7
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 8.0e-147 524.6 457 57.8
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 2.3e-146 523.1 486 56.6
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 6.8e-146 521.5 416 61.8
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.3e-144 517.3 423 58.4
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 1.7e-144 516.9 418 60.8
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.7e-144 516.9 406 60.6
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 2.2e-144 516.5 491 54.8
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 2.9e-144 516.2 423 58.2
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 3.7e-144 515.8 418 60.0
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 1.2e-142 510.8 392 65.3
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 2.7e-142 509.6 416 58.4
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 3.5e-142 509.2 463 56.8
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 5.6e-140 501.9 419 59.4
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 4.0e-138 495.7 429 58.5
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 4.4e-137 492.3 374 62.6
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 4.9e-136 488.8 371 62.8
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 4.1e-135 485.7 405 59.8
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 1.2e-134 484.2 486 54.9
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 1.0e-133 481.1 464 53.2
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 1.9e-132 476.9 504 51.6
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 1.4e-130 470.7 428 54.4
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 9.9e-129 464.5 423 55.3
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 2.7e-126 456.4 421 53.7
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 3.5e-126 456.1 372 59.7
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 3.9e-125 452.6 417 54.7
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 2.0e-121 440.3 414 55.1
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 7.6e-121 438.3 382 59.7
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 2.2e-120 436.8 367 58.0
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 4.0e-114 416.0 423 51.1
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.0e-105 387.1 425 48.9
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 6.4e-104 382.1 425 49.2
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.5e-100 370.9 284 65.1
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 5.3e-98 362.5 433 44.8
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 1.8e-93 347.4 418 43.3
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 1.1e-90 338.2 401 44.1
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.2e-86 324.7 304 52.6
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 6.7e-85 318.9 221 68.8
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 9.7e-84 315.1 417 41.0
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.7e-80 304.3 363 45.7
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 1.9e-79 300.8 261 60.2
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 1.1e-74 285.0 315 51.7
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 6.1e-70 269.2 213 66.2
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 2.3e-53 214.2 220 51.4
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 1.2e-49 201.8 458 34.1
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 5.0e-48 196.4 457 31.1
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 4.9e-35 153.3 168 48.2
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 8.6e-32 142.5 104 64.4
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.1e-31 142.1 100 66.0
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 6.8e-29 132.9 93 63.4
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 4.4e-28 130.2 109 58.7
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 7.5e-28 129.4 95 62.1
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.6e-25 121.7 404 27.2
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 3.5e-25 120.6 110 61.8
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 2.8e-22 110.9 80 70.0
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 3.5e-17 94.0 92 44.6
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 9.9e-12 75.9 49 79.6
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.9e-11 74.3 69 47.8
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 1.1e-10 72.4 80 47.5
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 3.0e-08 64.3 41 70.7
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 4.7e-06 57.0 42 66.7


User provided reference genes

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