Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.2e-280 969.1 491 100.0
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 5.5e-273 943.7 492 98.0
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 1.2e-256 889.4 491 91.2
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 1.1e-193 680.2 494 69.0
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 5.5e-180 634.8 493 66.9
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 3.0e-178 629.0 496 65.7
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 4.4e-177 625.2 489 64.4
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 6.5e-173 611.3 495 64.2
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 2.5e-172 609.4 476 66.2
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 2.1e-171 606.3 481 63.8
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 4.7e-171 605.1 494 63.6
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 6.7e-170 601.3 497 62.0
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 8.8e-170 600.9 469 65.2
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 7.4e-169 597.8 437 68.9
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 9.7e-169 597.4 498 61.0
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 2.2e-168 596.3 498 61.0
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 2.2e-168 596.3 495 62.0
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 4.8e-168 595.1 497 61.2
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 5.3e-167 591.7 463 65.7
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 9.1e-167 590.9 496 61.7
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 2.6e-166 589.3 483 62.3
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 3.5e-166 589.0 493 60.4
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.0e-165 587.4 498 60.4
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 2.9e-165 585.9 562 57.1
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 3.8e-165 585.5 421 67.5
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.1e-164 583.9 490 60.2
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 7.2e-164 581.3 439 64.5
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 5.2e-162 575.1 422 67.1
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 4.4e-161 572.0 420 66.7
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 7.5e-161 571.2 420 67.1
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 9.7e-161 570.9 455 63.5
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 4.8e-160 568.5 456 62.5
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 2.4e-159 566.2 460 62.4
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 1.6e-158 563.5 476 58.8
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 3.5e-158 562.4 434 64.5
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.7e-157 560.1 512 56.6
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 2.2e-157 559.7 421 63.7
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 2.9e-157 559.3 448 62.3
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 2.9e-157 559.3 472 60.4
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 5.0e-157 558.5 443 63.4
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 8.5e-157 557.8 421 63.2
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.1e-156 557.4 490 56.9
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 2.5e-156 556.2 465 61.3
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 2.5e-156 556.2 414 66.2
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 3.2e-156 555.8 433 64.0
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 9.4e-156 554.3 418 65.6
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 1.2e-155 553.9 465 61.3
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 1.2e-155 553.9 454 63.0
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 1.6e-155 553.5 478 57.3
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 2.3e-154 549.7 494 56.1
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 2.3e-154 549.7 420 62.9
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 5.2e-154 548.5 462 60.8
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 1.2e-153 547.4 418 66.0
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 1.5e-153 547.0 414 65.2
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 5.7e-153 545.0 492 56.7
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 5.7e-153 545.0 464 59.5
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 7.5e-153 544.7 417 63.5
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 1.3e-152 543.9 479 59.9
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 1.7e-152 543.5 423 62.9
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 2.8e-152 542.7 417 64.3
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 2.8e-152 542.7 437 59.0
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 3.7e-152 542.3 419 63.5
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 4.8e-152 542.0 419 63.5
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 8.3e-152 541.2 419 63.5
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 8.3e-152 541.2 414 63.8
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 1.1e-151 540.8 456 59.2
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 2.3e-149 533.1 444 61.3
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 2.9e-149 532.7 490 55.7
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.1e-148 530.8 416 62.3
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.3e-148 529.3 423 59.3
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 7.2e-148 528.1 485 56.9
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.6e-147 526.9 423 58.9
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 1.6e-147 526.9 418 61.2
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.0e-146 524.2 434 58.8
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.8e-146 523.5 406 61.3
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 5.2e-146 521.9 462 57.8
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 1.2e-145 520.8 416 59.1
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 4.9e-144 515.4 392 65.6
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 1.7e-141 506.9 419 59.4
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 3.3e-140 502.7 430 59.5
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 8.0e-139 498.0 371 63.3
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 2.3e-138 496.5 374 62.8
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 1.5e-137 493.8 485 55.5
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 9.8e-137 491.1 405 60.0
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 1.3e-136 490.7 463 54.2
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 8.3e-136 488.0 503 52.1
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 3.5e-134 482.6 428 55.4
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 9.5e-132 474.6 423 56.3
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 2.6e-129 466.5 421 54.2
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 2.9e-128 463.0 372 59.9
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 8.3e-128 461.5 417 55.4
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 3.5e-126 456.1 414 56.3
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 8.9e-122 441.4 367 58.0
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 3.4e-121 439.5 391 59.1
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 6.6e-117 425.2 423 51.5
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.3e-107 394.4 425 49.4
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 9.0e-106 388.3 425 49.4
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.3e-101 373.6 284 65.1
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 2.1e-99 367.1 433 45.0
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 1.4e-95 354.4 418 43.5
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 3.3e-92 343.2 401 44.4
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 4.9e-88 329.3 304 53.0
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 6.0e-86 322.4 417 41.2
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 1.0e-85 321.6 221 68.8
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 2.4e-82 310.5 363 46.3
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 5.0e-80 302.8 261 60.2
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 8.7e-77 292.0 314 52.5
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 3.2e-71 273.5 204 69.6
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 3.6e-54 216.9 220 51.8
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 7.5e-52 209.1 458 34.7
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 1.0e-48 198.7 459 31.4
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 8.8e-37 159.1 167 49.7
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 5.9e-33 146.4 100 67.0
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 1.7e-32 144.8 104 65.4
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 6.1e-30 136.3 93 64.5
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 3.0e-29 134.0 95 64.2
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 3.0e-29 134.0 116 56.9
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.1e-26 125.6 407 28.0
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 5.4e-26 123.2 110 62.7
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.1e-23 115.5 80 71.2
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 3.5e-17 94.0 92 44.6
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 1.5e-12 78.6 49 81.6
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 3.7e-11 73.9 69 47.8
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 1.1e-10 72.4 80 47.5
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.1e-09 68.2 48 64.6
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 5.6e-07 60.1 42 69.0


User provided reference genes

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