Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 0.0e+00 1699.5 894 100.0
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 0.0e+00 1468.0 913 86.5
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 0.0e+00 1083.9 896 66.4
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 6.7e-293 1010.7 913 61.3
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.5e-292 1009.6 910 62.3
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 3.7e-291 1005.0 925 59.8
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 1.4e-290 1003.0 911 62.5
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 3.1e-290 1001.9 941 59.8
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 5.3e-290 1001.1 926 60.9
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 6.7e-285 984.2 795 66.4
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 4.5e-281 971.5 914 61.6
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 7.7e-281 970.7 892 61.4
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 1.0e-277 960.3 893 60.9
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 1.8e-277 959.5 862 61.5
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 2.3e-277 959.1 925 59.6
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 4.0e-277 958.4 940 58.6
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 4.8e-275 951.4 901 59.7
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 1.0e-272 943.7 910 58.9
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 2.2e-272 942.6 885 58.6
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 5.0e-272 941.4 900 59.0
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 1.9e-271 939.5 901 58.7
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 5.5e-271 937.9 903 58.9
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 9.4e-271 937.2 925 57.6
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 2.1e-270 936.0 906 59.6
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.7e-270 935.6 921 58.7
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 8.0e-270 934.1 923 58.6
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 1.0e-269 933.7 805 62.7
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 1.8e-269 932.9 878 59.6
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 1.8e-269 932.9 904 59.3
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 4.0e-269 931.8 882 58.8
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 5.7e-268 927.9 859 59.5
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 8.3e-267 924.1 890 58.2
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 4.5e-265 918.3 886 58.2
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 5.9e-265 917.9 906 58.1
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 3.8e-264 915.2 890 57.9
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 3.8e-264 915.2 905 58.0
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 1.1e-263 913.7 901 57.7
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 2.5e-263 912.5 889 59.4
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 2.7e-262 909.1 883 57.3
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 2.7e-262 909.1 890 57.0
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 2.3e-261 906.0 973 55.2
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 1.7e-259 899.8 892 57.3
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 1.1e-258 897.1 897 56.9
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.8e-258 896.3 815 61.2
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 3.5e-257 892.1 876 56.5
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 2.9e-256 889.0 917 56.1
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 8.6e-256 887.5 905 56.8
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 7.3e-255 884.4 894 56.4
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 1.6e-254 883.2 819 58.7
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 7.5e-252 874.4 832 57.9
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 1.3e-251 873.6 832 57.9
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 5.9e-249 864.8 818 58.6
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 7.8e-249 864.4 822 58.6
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 7.8e-249 864.4 940 52.1
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 5.6e-247 858.2 906 54.9
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 9.5e-247 857.4 918 55.0
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 9.5e-247 857.4 954 52.5
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 4.7e-246 855.1 822 57.2
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 6.8e-245 851.3 824 56.7
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 1.3e-243 847.0 827 57.4
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 2.0e-241 839.7 889 55.6
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 1.0e-240 837.4 793 58.0
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 1.3e-240 837.0 801 57.6
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 8.6e-240 834.3 797 58.2
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 1.9e-239 833.2 833 55.8
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 1.9e-239 833.2 802 57.7
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 1.2e-238 830.5 947 52.2
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 6.2e-238 828.2 879 53.7
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 1.4e-237 827.0 891 53.2
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 3.1e-237 825.9 886 55.9
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 4.0e-237 825.5 825 55.6
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 5.2e-237 825.1 924 53.2
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 3.4e-236 822.4 804 55.6
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 5.1e-232 808.5 890 52.8
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 1.2e-230 803.9 893 52.9
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 6.8e-229 798.1 835 53.5
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 3.4e-228 795.8 888 52.8
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 1.6e-225 786.9 827 52.7
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 1.0e-224 784.3 892 50.6
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 1.1e-223 780.8 825 54.2
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 9.6e-223 777.7 810 54.0
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 5.4e-218 761.9 674 63.5
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 6.0e-209 731.9 884 49.5
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 2.3e-208 729.9 765 53.1
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 2.8e-206 723.0 851 49.1
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 2.2e-203 713.4 797 50.8
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 3.7e-190 669.5 704 54.1
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 1.5e-188 664.1 813 47.8
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 5.9e-188 662.1 647 56.6
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 3.9e-184 649.4 783 48.8
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 4.1e-181 639.4 820 47.4
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 3.4e-172 609.8 592 55.6
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 2.2e-171 607.1 748 48.3
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 1.2e-169 601.3 467 65.7
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 3.5e-164 583.2 550 60.9
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 7.7e-164 582.0 900 43.4
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 1.3e-158 564.7 408 67.6
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 5.3e-157 559.3 501 59.9
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 4.0e-152 543.1 903 42.3
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 5.4e-141 506.1 580 51.2
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 1.2e-129 468.4 414 58.9
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 5.6e-106 389.8 792 35.6
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 6.4e-94 349.7 561 43.1
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 1.2e-92 345.5 376 56.4
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 2.5e-90 337.8 222 76.1
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 8.2e-81 306.2 990 28.1
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 8.4e-78 296.2 674 31.5
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 1.2e-76 292.4 800 30.2
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 1.5e-74 285.4 1098 28.4
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 3.3e-66 257.7 236 62.7
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 3.4e-55 221.1 287 46.7
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 1.2e-52 212.6 149 69.8
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 3.3e-50 204.5 253 56.5
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 1.0e-38 166.4 217 45.2
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 2.1e-36 158.7 194 50.0
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 4.3e-21 107.8 153 49.7
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 2.8e-20 105.1 64 71.9
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 1.4e-16 92.8 723 24.5
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 2.7e-15 88.6 55 74.5
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 5.6e-13 80.9 144 39.6
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 2.1e-12 79.0 86 52.3
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 2.1e-12 79.0 86 52.3
Cfa010565 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.1e-11 76.6 90 51.1
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 9.8e-10 70.1 67 55.2


User provided reference genes

Program Settings