Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 6.1e-123 444.1 216 100.0
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 1.0e-101 373.6 254 76.8
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 1.1e-92 343.6 217 77.0
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 4.5e-86 321.6 217 71.9
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 1.9e-84 316.2 217 71.9
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 2.0e-81 306.2 217 70.0
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 8.3e-80 300.8 212 70.3
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 1.8e-79 299.7 217 68.7
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 2.4e-79 299.3 217 68.2
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 9.2e-79 297.4 216 67.6
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 1.6e-78 296.6 216 66.7
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 2.0e-78 296.2 216 66.7
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 2.7e-78 295.8 217 69.1
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 4.5e-78 295.0 194 72.2
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 5.9e-78 294.7 216 65.7
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 7.7e-78 294.3 217 66.8
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 7.7e-78 294.3 216 66.2
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 8.6e-77 290.8 215 67.4
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 1.1e-76 290.4 217 63.6
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 2.5e-76 289.3 217 63.6
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 3.3e-76 288.9 217 68.2
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 4.7e-75 285.0 217 63.6
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 1.4e-74 283.5 218 63.8
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 1.4e-74 283.5 218 63.8
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 1.4e-74 283.5 217 62.2
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.8e-74 283.1 217 65.0
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 5.2e-74 281.6 217 64.5
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 8.9e-74 280.8 217 62.7
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 8.9e-74 280.8 217 64.5
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 2.6e-73 279.3 218 62.8
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 9.8e-73 277.3 216 64.8
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 2.2e-72 276.2 223 62.8
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 3.7e-72 275.4 217 63.1
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 3.7e-72 275.4 205 69.3
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 6.4e-72 274.6 216 62.5
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 1.1e-71 273.9 217 63.6
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 1.4e-71 273.5 193 67.9
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 2.4e-71 272.7 217 62.2
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 3.2e-71 272.3 217 64.1
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 4.1e-71 271.9 216 63.4
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 5.4e-71 271.6 219 62.1
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 7.0e-71 271.2 218 63.3
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 9.2e-71 270.8 219 62.6
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 1.2e-70 270.4 217 63.1
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 1.6e-70 270.0 198 68.2
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 2.0e-70 269.6 217 62.7
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 4.6e-70 268.5 224 61.2
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 5.9e-70 268.1 217 61.3
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 7.8e-70 267.7 218 62.8
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 1.7e-69 266.5 219 61.2
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 1.7e-69 266.5 222 61.3
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 2.3e-69 266.2 218 63.8
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 3.9e-69 265.4 217 59.9
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 6.6e-69 264.6 216 63.4
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 1.5e-68 263.5 217 60.8
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 2.5e-68 262.7 216 63.0
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 9.5e-68 260.8 216 59.3
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.6e-67 260.0 217 59.4
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 2.1e-67 259.6 202 64.9
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 6.2e-67 258.1 216 58.8
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 6.2e-67 258.1 217 60.4
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 4.0e-66 255.4 217 58.5
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 4.0e-66 255.4 183 63.4
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 1.7e-64 250.0 217 59.9
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 2.2e-64 249.6 217 61.3
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 2.2e-64 249.6 165 68.5
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 4.9e-64 248.4 158 71.5
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 8.3e-64 247.7 174 64.9
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 1.4e-63 246.9 218 58.3
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 5.4e-63 245.0 217 58.1
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 5.4e-63 245.0 217 59.4
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 9.2e-63 244.2 217 57.1
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 1.6e-62 243.4 214 56.1
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 2.0e-62 243.0 217 58.5
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 2.7e-62 242.7 218 56.9
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 1.0e-61 240.7 216 56.5
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.3e-61 239.6 220 55.9
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 2.3e-61 239.6 218 54.1
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 1.1e-60 237.3 216 57.4
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 1.9e-60 236.5 219 57.1
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 2.5e-60 236.1 219 57.1
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 2.5e-60 236.1 219 57.1
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 4.3e-60 235.3 218 57.8
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 9.5e-60 234.2 216 56.5
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 1.2e-59 233.8 217 57.1
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 1.6e-59 233.4 214 55.6
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 2.9e-56 222.6 199 58.3
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 4.1e-55 218.8 204 55.9
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 1.2e-54 217.2 217 50.7
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 4.3e-52 208.8 137 69.3
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 2.4e-47 193.0 219 45.7
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 1.6e-46 190.3 220 48.2
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 4.6e-46 188.7 162 58.6
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 4.0e-42 175.6 153 52.9
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 3.4e-41 172.6 134 53.7
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 1.9e-39 166.8 146 59.6
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 1.2e-38 164.1 188 48.9
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 2.7e-38 162.9 135 51.9
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 1.6e-35 153.7 152 48.0
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 6.4e-32 141.7 217 37.3
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 1.9e-31 140.2 139 53.2
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 7.4e-28 128.3 80 71.2
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 1.6e-27 127.1 141 41.1
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 1.3e-19 100.9 52 80.8
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 3.7e-19 99.4 156 37.2
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 8.4e-16 88.2 56 75.0
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 9.6e-12 74.7 44 75.0


User provided reference genes

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