Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.013G088900 Populus trichocarpa HOM05D000580 ORTHO05D001785 9.6e-83 310.1 152 100.0
Potri.011G074600 Populus trichocarpa HOM05D000580 ORTHO05D001785 1.2e-64 250.0 149 83.2
HanXRQChr04g0094331 Helianthus annuus HOM05D000580 ORTHO05D001785 1.0e-63 246.9 149 82.6
Solyc00g500158.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.0e-63 246.9 149 81.9
Migut.D01433 Erythranthe guttata HOM05D000580 ORTHO05D001785 1.3e-63 246.5 149 81.9
HanXRQChr00c0394g0574571 Helianthus annuus HOM05D000580 ORTHO05D001785 2.2e-63 245.7 149 81.9
HanXRQChr00c0557g0575751 Helianthus annuus HOM05D000580 ORTHO05D001785 2.2e-63 245.7 149 81.9
HanXRQChr01g0020251 Helianthus annuus HOM05D000580 ORTHO05D001785 2.2e-63 245.7 149 81.9
HanXRQChr04g0127521 Helianthus annuus HOM05D000580 ORTHO05D001785 2.2e-63 245.7 149 81.9
HanXRQChr10g0284351 Helianthus annuus HOM05D000580 ORTHO05D001785 2.2e-63 245.7 149 81.9
HanXRQChr10g0318091 Helianthus annuus HOM05D000580 ORTHO05D001785 2.2e-63 245.7 149 81.9
HanXRQChr11g0326931 Helianthus annuus HOM05D000580 ORTHO05D001785 2.2e-63 245.7 149 81.9
HanXRQCPg0580151 Helianthus annuus HOM05D000580 ORTHO05D001785 2.2e-63 245.7 149 81.9
CAN.G1595.5 Capsicum annuum HOM05D000580 ORTHO05D001785 3.8e-63 245.0 149 81.2
CAN.G307.12 Capsicum annuum HOM05D000580 ORTHO05D001785 3.8e-63 245.0 149 81.2
CARHR282220 Cardamine hirsuta HOM05D000580 ORTHO05D001785 3.8e-63 245.0 149 81.9
HanXRQChr02g0052671 Helianthus annuus HOM05D000580 ORTHO05D001785 8.5e-63 243.8 149 80.5
C05p18880 Brassica napus HOM05D000580 ORTHO05D001785 1.1e-62 243.4 149 81.2
BolSC35t60666H Brassica oleracea HOM05D000580 ORTHO05D001785 1.1e-62 243.4 149 81.2
BolSC47t61078H Brassica oleracea HOM05D000580 ORTHO05D001785 1.1e-62 243.4 149 81.2
BraSC143t45634Z Brassica rapa HOM05D000580 ORTHO05D001785 1.1e-62 243.4 149 81.2
CAN.G327.17 Capsicum annuum HOM05D000580 ORTHO05D001785 4.2e-62 241.5 149 81.2
BraSC138t45556Z Brassica rapa HOM05D000580 ORTHO05D001785 3.6e-61 238.4 151 79.5
CAN.G1478.6 Capsicum annuum HOM05D000580 ORTHO05D001785 7.9e-61 237.3 149 78.5
BolSC35t60733H Brassica oleracea HOM05D000580 ORTHO05D001785 1.0e-60 236.9 148 81.1
Gohir.A03G137700 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.3e-60 236.5 149 79.9
CAN.G134.1 Capsicum annuum HOM05D000580 ORTHO05D001785 5.1e-60 234.6 149 79.9
CAN.G129.15 Capsicum annuum HOM05D000580 ORTHO05D001785 6.7e-60 234.2 149 79.2
HanXRQChr11g0345251 Helianthus annuus HOM05D000580 ORTHO05D001785 6.7e-60 234.2 149 79.2
Gohir.D01G102086 Gossypium hirsutum HOM05D000580 ORTHO05D001785 8.7e-60 233.8 141 84.4
EL10As12g24033 Beta vulgaris HOM05D000580 ORTHO05D001785 7.4e-59 230.7 141 82.3
Gohir.A12G178675 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.2e-58 229.2 139 82.0
LjContig00319g0017313 Lotus japonicus HOM05D000580 ORTHO05D001785 2.2e-58 229.2 138 82.6
LjContig00319g0022083 Lotus japonicus HOM05D000580 ORTHO05D001785 2.2e-58 229.2 138 82.6
Gohir.1Z078400 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.7e-58 228.4 139 82.7
Hund29543 Selenicereus undatus HOM05D000580 ORTHO05D001785 3.7e-58 228.4 140 82.9
Hund04056 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund08804 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund12526 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund19319 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund26843 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund27466 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund27479 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund27576 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund27594 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund27893 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund27983 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28047 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28107 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28266 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28324 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28457 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28467 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28486 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28517 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28527 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28630 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28744 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28757 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28844 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund28888 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29020 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29034 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29162 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29215 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29226 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29232 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29523 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29532 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29535 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29548 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29561 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29565 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29572 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29583 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29591 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29600 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29603 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29610 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29665 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29680 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29716 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29876 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund29955 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund30033 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund30067 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund30082 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund30302 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund30445 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund30485 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
Hund30800 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.8e-58 228.0 139 82.7
CAN.G127.15 Capsicum annuum HOM05D000580 ORTHO05D001785 8.2e-58 227.3 149 77.9
Gohir.A02G022101 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.1e-57 226.9 139 82.0
Hund15206 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.8e-57 226.1 138 82.6
PGR111G0048 Punica granatum HOM05D000580 ORTHO05D001785 2.6e-56 222.2 133 83.5
ATCG00730 Arabidopsis thaliana HOM05D000580 ORTHO05D001785 3.4e-56 221.9 133 82.7
DCAR_032516 Daucus carota HOM05D000580 ORTHO05D001785 3.4e-56 221.9 133 82.7
PSO548G0060 Papaver somniferum HOM05D000580 ORTHO05D001785 3.4e-56 221.9 133 82.7
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 5.9e-56 221.1 141 78.7
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 5.9e-56 221.1 141 78.7
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 5.9e-56 221.1 141 78.7
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 5.9e-56 221.1 141 78.7
HanXRQChr02g0052531 Helianthus annuus HOM05D000580 ORTHO05D001785 5.9e-56 221.1 133 82.7
Gohir.A01G137760 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.0e-55 220.3 139 79.9
Nn002s41358 Nelumbo nucifera HOM05D000580 ORTHO05D001785 1.4e-54 216.5 130 83.1
AL2G20590 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 1.8e-52 209.5 126 83.3
AL2G21690 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 1.8e-52 209.5 126 83.3
Lj1P929T39 Lonicera japonica HOM05D000580 ORTHO05D001785 7.4e-51 204.1 126 81.0
MCO11G579 Micromonas commoda HOM05D000580 ORTHO05D001785 2.0e-48 196.1 131 71.0
BraSC59t46574Z Brassica rapa HOM05D000580 ORTHO05D001785 7.7e-48 194.1 154 68.2
HanXRQChr10g0283661 Helianthus annuus HOM05D000580 ORTHO05D001785 1.0e-47 193.7 105 85.7
arahy.Tifrunner.gnm1.ann1.GZ00NU Arachis hypogaea HOM05D000580 ORTHO05D001785 9.4e-46 187.2 149 69.1
HanXRQChr15g0486551 Helianthus annuus HOM05D000580 ORTHO05D001785 9.4e-46 187.2 114 82.5
Gohir.A12G178615 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.7e-45 185.7 112 82.1
Gohir.A09G103750 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.6e-45 185.3 114 81.6
Lj2P1237T69 Lonicera japonica HOM05D000580 ORTHO05D001785 3.6e-45 185.3 114 81.6
Lj2P1239T124 Lonicera japonica HOM05D000580 ORTHO05D001785 3.6e-45 185.3 114 81.6
arahy.Tifrunner.gnm1.ann1.7X81Z4 Arachis hypogaea HOM05D000580 ORTHO05D001785 4.7e-45 184.9 149 69.1
Solyc00g500028.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.4e-44 183.3 149 66.4
HanXRQChr10g0303871 Helianthus annuus HOM05D000580 ORTHO05D001785 2.3e-44 182.6 149 64.4
BolSC29t60606H Brassica oleracea HOM05D000580 ORTHO05D001785 3.9e-44 181.8 112 81.2
Gohir.A12G178640 Gossypium hirsutum HOM05D000580 ORTHO05D001785 6.7e-44 181.0 114 79.8
Pp3c21_5670 Physcomitrium patens HOM05D000580 ORTHO05D001785 2.0e-43 179.5 114 78.9
Psat5g206560 Pisum sativum HOM05D000580 ORTHO05D001785 1.1e-41 173.7 114 76.3
BolSC49t61166H Brassica oleracea HOM05D000580 ORTHO05D001785 2.4e-41 172.6 102 85.3
Gorai.009G350200 Gossypium raimondii HOM05D000580 ORTHO05D001785 4.1e-41 171.8 92 89.1
HanXRQChr13g0395721 Helianthus annuus HOM05D000580 ORTHO05D001785 4.1e-41 171.8 93 87.1
Glyma.15G114600 Glycine max HOM05D000580 ORTHO05D001785 3.5e-40 168.7 103 83.5
MELO3C000399.2 Cucumis melo HOM05D000580 ORTHO05D001785 1.0e-39 167.2 107 80.4
Gorai.007G064400 Gossypium raimondii HOM05D000580 ORTHO05D001785 1.7e-39 166.4 92 87.0
HanXRQChr17g0570211 Helianthus annuus HOM05D000580 ORTHO05D001785 3.8e-39 165.2 92 85.9
Mapoly4043s0001 Marchantia polymorpha HOM05D000580 ORTHO05D001785 1.9e-38 162.9 91 86.8
BNapus_Darmor_BZH_scaffold_253p00320 Brassica napus HOM05D000580 ORTHO05D001785 4.2e-38 161.8 88 86.4
Gohir.D07G170866 Gossypium hirsutum HOM05D000580 ORTHO05D001785 5.5e-38 161.4 111 73.9
Hund28676 Selenicereus undatus HOM05D000580 ORTHO05D001785 6.1e-37 157.9 114 70.2
Solyc01g017430.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.4e-36 156.8 127 64.6
CAN.G1185.3 Capsicum annuum HOM05D000580 ORTHO05D001785 3.3e-35 152.1 85 87.1
BolSC29t60630H Brassica oleracea HOM05D000580 ORTHO05D001785 4.4e-35 151.8 83 85.5
SMO086G0045 Selaginella moellendorffii HOM05D000580 ORTHO05D001785 1.3e-34 150.2 148 57.4
HanXRQChr11g0321061 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-34 148.7 99 79.8
Solyc03g122000.4 Solanum lycopersicum HOM05D000580 ORTHO05D001785 5.9e-32 141.4 101 75.2
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 1.3e-31 140.2 93 78.5
Carub.0006s2563 Capsella rubella HOM05D000580 ORTHO05D001785 2.9e-31 139.0 76 85.5
Eucgr.E04205 Eucalyptus grandis HOM05D000580 ORTHO05D001785 2.9e-31 139.0 76 85.5
Psat6g110880 Pisum sativum HOM05D000580 ORTHO05D001785 3.8e-31 138.7 100 74.0
Hund27960 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.1e-30 137.1 100 72.0
Hund29507 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.1e-30 137.1 94 75.5
arahy.Tifrunner.gnm1.ann1.J8VLEJ Arachis hypogaea HOM05D000580 ORTHO05D001785 1.9e-30 136.3 91 78.0
Solyc00g500073.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 2.5e-30 136.0 100 72.0
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 3.2e-30 135.6 98 72.4
arahy.Tifrunner.gnm1.ann1.I9279U Arachis hypogaea HOM05D000580 ORTHO05D001785 1.8e-28 129.8 97 73.2
Hma1.2p1_0218F.1_g092740 Hydrangea macrophylla HOM05D000580 ORTHO05D001785 1.8e-28 129.8 119 62.2
Lalb_Chr18g0049341 Lupinus albus HOM05D000580 ORTHO05D001785 1.8e-28 129.8 89 73.0
Ah.10g027190 Amaranthus hybridus HOM05D000580 ORTHO05D001785 1.3e-26 123.6 83 78.3
Ah.10g027480 Amaranthus hybridus HOM05D000580 ORTHO05D001785 1.3e-26 123.6 83 78.3
Gohir.A07G130966 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.3e-26 123.6 83 77.1
Medtr0002s0750 Medicago truncatula HOM05D000580 ORTHO05D001785 1.3e-26 123.6 82 79.3
Medtr4g034790 Medicago truncatula HOM05D000580 ORTHO05D001785 3.7e-26 122.1 84 76.2
HanXRQChr05g0148481 Helianthus annuus HOM05D000580 ORTHO05D001785 7.0e-25 117.9 97 67.0
Lsat_1_v5_gn_8_161300 Lactuca sativa HOM05D000580 ORTHO05D001785 7.0e-25 117.9 97 62.9
CAN.G1367.7 Capsicum annuum HOM05D000580 ORTHO05D001785 2.7e-24 115.9 79 77.2
HanXRQChr12g0369831 Helianthus annuus HOM05D000580 ORTHO05D001785 2.2e-23 112.8 75 78.7
Nn8g40935 Nelumbo nucifera HOM05D000580 ORTHO05D001785 2.2e-23 112.8 75 78.7
SalBow1G5124 Salvia bowleyana HOM05D000580 ORTHO05D001785 2.2e-23 112.8 75 78.7
Gorai.001G191300 Gossypium raimondii HOM05D000580 ORTHO05D001785 1.5e-22 110.2 77 74.0
HanXRQChr16g0513491 Helianthus annuus HOM05D000580 ORTHO05D001785 1.5e-22 110.2 73 78.1
Sc15g0001500 Simmondsia chinensis HOM05D000580 ORTHO05D001785 1.9e-22 109.8 75 76.0
CAN.G219.33 Capsicum annuum HOM05D000580 ORTHO05D001785 3.2e-22 109.0 75 76.0
BolC7t41712H Brassica oleracea HOM05D000580 ORTHO05D001785 7.2e-22 107.8 54 87.0
BraSC103t45448Z Brassica rapa HOM05D000580 ORTHO05D001785 2.1e-21 106.3 76 75.0
Sopen05g009050 Solanum pennellii HOM05D000580 ORTHO05D001785 2.8e-21 105.9 78 70.5
MELO3C034318.2 Cucumis melo HOM05D000580 ORTHO05D001785 2.6e-19 99.4 75 68.0
Lalb_Chr18g0049681 Lupinus albus HOM05D000580 ORTHO05D001785 5.7e-19 98.2 67 79.1
BolSC46t61017H Brassica oleracea HOM05D000580 ORTHO05D001785 2.2e-18 96.3 64 78.1
Lalb_Chr03g0039291 Lupinus albus HOM05D000580 ORTHO05D001785 6.3e-18 94.7 57 80.7
arahy.Tifrunner.gnm1.ann1.BY1G47 Arachis hypogaea HOM05D000743 ORTHO05D001785 3.1e-17 92.4 59 83.1
BraSC103t45481Z Brassica rapa HOM05D000580 ORTHO05D001785 2.3e-15 86.3 49 83.7
HanXRQChr05g0152591 Helianthus annuus HOM05D000580 ORTHO05D001785 4.3e-14 82.0 53 83.0
EL10Ac5g11666 Beta vulgaris HOM05D000580 ORTHO05D001785 5.6e-14 81.6 75 62.7
Ciclev10003610m.g Citrus clementina HOM05D000580 ORTHO05D001785 1.2e-13 80.5 46 82.6
HanXRQChr16g0529051 Helianthus annuus HOM05D000580 ORTHO05D001785 1.6e-13 80.1 51 82.4
Migut.D01367 Erythranthe guttata HOM05D000580 ORTHO05D001785 2.1e-13 79.7 41 87.8
RcHm_v2.0_Chr3g0476911 Rosa chinensis HOM05D000580 ORTHO05D001785 8.0e-13 77.8 56 71.4
Lalb_Chr23g0274221 Lupinus albus HOM05D000580 ORTHO05D001785 7.5e-11 71.2 55 70.9
HanXRQChr00c0314g0573481 Helianthus annuus HOM05D000580 ORTHO05D001785 9.8e-11 70.9 55 70.9
CARHR194070 Cardamine hirsuta HOM05D000580 ORTHO05D001785 2.2e-10 69.7 54 70.4
Medtr2g021500 Medicago truncatula HOM05D000580 ORTHO05D001785 1.2e-08 63.9 52 57.7
Nn021s41525 Nelumbo nucifera HOM05D000580 ORTHO05D001785 7.3e-06 54.7 58 60.3


User provided reference genes

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