Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.2e-73 278.9 144 100.0
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 4.0e-70 268.1 157 90.4
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 2.2e-68 262.3 144 92.4
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.2e-68 262.3 144 93.8
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 2.8e-68 261.9 144 93.1
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 1.6e-66 256.1 144 91.0
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 5.0e-65 251.1 142 88.7
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 5.0e-65 251.1 142 88.7
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 5.0e-65 251.1 144 86.8
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 2.5e-64 248.8 144 89.6
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 2.5e-64 248.8 144 89.6
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 3.3e-64 248.4 144 89.6
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 4.2e-64 248.1 144 88.2
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 5.5e-64 247.7 146 90.4
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 7.2e-64 247.3 145 88.3
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 1.2e-63 246.5 142 87.3
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 1.6e-63 246.1 142 88.7
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 3.6e-63 245.0 143 90.2
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 3.6e-63 245.0 144 88.2
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 1.0e-62 243.4 145 87.6
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.0e-62 243.4 145 86.9
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 2.3e-62 242.3 145 88.3
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 2.3e-62 242.3 145 87.6
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 3.0e-62 241.9 145 88.3
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 4.0e-62 241.5 145 88.3
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 4.0e-62 241.5 144 88.2
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 4.0e-62 241.5 142 87.3
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 5.2e-62 241.1 144 86.1
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 6.8e-62 240.7 145 87.6
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 6.8e-62 240.7 145 86.9
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 6.8e-62 240.7 144 87.5
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 6.8e-62 240.7 145 86.9
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 8.9e-62 240.4 145 86.2
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 8.9e-62 240.4 144 87.5
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 8.9e-62 240.4 145 88.3
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.2e-61 240.0 145 87.6
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 1.2e-61 240.0 145 86.2
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 1.2e-61 240.0 144 87.5
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 1.2e-61 240.0 144 87.5
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 1.5e-61 239.6 145 86.9
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 1.5e-61 239.6 140 87.1
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 1.5e-61 239.6 144 89.6
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 2.0e-61 239.2 145 86.9
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 2.6e-61 238.8 145 87.6
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 2.6e-61 238.8 144 88.2
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 3.4e-61 238.4 146 86.3
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 4.4e-61 238.0 145 87.6
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 4.4e-61 238.0 134 91.0
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 4.4e-61 238.0 144 86.8
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 4.4e-61 238.0 144 86.8
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 4.4e-61 238.0 144 86.8
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 4.4e-61 238.0 145 85.5
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 5.7e-61 237.7 146 87.0
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 7.5e-61 237.3 145 86.2
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 7.5e-61 237.3 146 84.9
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 7.5e-61 237.3 145 84.8
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 7.5e-61 237.3 144 87.5
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.3e-60 236.5 144 86.1
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 2.2e-60 235.7 141 87.2
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 2.2e-60 235.7 145 86.9
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 2.8e-60 235.3 145 86.2
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.8e-60 235.3 145 85.5
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 2.8e-60 235.3 145 85.5
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 2.8e-60 235.3 144 84.0
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 3.7e-60 235.0 145 84.1
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 4.9e-60 234.6 145 86.2
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 1.1e-59 233.4 145 85.5
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 1.1e-59 233.4 145 85.5
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 1.1e-59 233.4 145 85.5
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 1.1e-59 233.4 145 85.5
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 1.1e-59 233.4 145 85.5
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.1e-59 233.4 132 90.9
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.1e-59 233.4 145 86.2
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 1.4e-59 233.0 145 84.1
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.8e-59 232.6 132 89.4
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.8e-59 232.6 141 85.8
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 5.4e-59 231.1 146 84.2
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 2.0e-58 229.2 145 86.2
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 2.7e-58 228.8 130 90.0
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 1.7e-57 226.1 130 89.2
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 2.3e-57 225.7 145 81.4
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 2.3e-57 225.7 142 83.8
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 5.0e-57 224.6 145 83.4
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 6.6e-57 224.2 146 83.6
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 8.6e-57 223.8 146 84.2
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 2.5e-56 222.2 146 81.5
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 9.5e-56 220.3 146 82.2
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 9.5e-56 220.3 144 81.9
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.2e-55 219.9 146 82.2
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 1.2e-55 219.9 144 80.6
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 1.6e-55 219.5 146 82.2
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 3.6e-55 218.4 201 62.7
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 4.7e-55 218.0 144 81.2
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 4.7e-55 218.0 146 79.5
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 6.1e-55 217.6 145 82.8
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 8.0e-55 217.2 146 81.5
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.4e-54 216.5 145 80.7
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 1.4e-54 216.5 146 79.5
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 1.8e-54 216.1 146 80.1
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 1.8e-54 216.1 144 81.2
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 3.0e-54 215.3 145 80.0
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 4.0e-54 214.9 143 81.1
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 4.0e-54 214.9 136 81.6
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 5.2e-54 214.5 145 80.7
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 1.2e-53 213.4 145 82.8
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 1.2e-53 213.4 145 82.8
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 1.2e-53 213.4 145 82.8
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 1.5e-53 213.0 145 80.7
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 2.0e-53 212.6 145 80.7
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 2.6e-53 212.2 145 78.6
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 2.6e-53 212.2 142 80.3
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 3.4e-53 211.8 142 81.7
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 1.3e-52 209.9 136 84.6
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.3e-52 209.9 145 77.9
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.3e-52 209.9 145 77.9
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 1.7e-52 209.5 145 79.3
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.8e-51 206.1 145 77.2
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 2.4e-51 205.7 146 78.8
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 1.0e-49 200.3 144 76.4
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 1.0e-49 200.3 144 78.5
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.7e-49 199.5 133 82.0
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.7e-49 199.5 150 76.7
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 2.3e-49 199.1 147 76.2
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 3.0e-49 198.7 128 82.8
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 1.9e-48 196.1 180 65.6
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 2.5e-48 195.7 147 74.8
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 3.3e-48 195.3 143 74.1
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 3.3e-48 195.3 145 73.8
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 9.5e-48 193.7 145 76.6
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 9.5e-48 193.7 145 76.6
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 9.5e-48 193.7 145 76.6
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 3.6e-47 191.8 144 75.0
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 8.0e-47 190.7 144 75.7
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 3.1e-46 188.7 168 64.9
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 1.5e-45 186.4 120 84.2
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.9e-44 182.2 144 73.6
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 2.9e-44 182.2 142 73.9
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 1.9e-43 179.5 144 71.5
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 2.4e-43 179.1 144 72.9
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 2.7e-42 175.6 146 73.3
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 6.0e-42 174.5 133 73.7
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 7.8e-42 174.1 145 68.3
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 1.0e-41 173.7 141 70.9
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 1.3e-41 173.3 138 73.2
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 1.7e-41 172.9 95 87.4
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 3.0e-41 172.2 146 69.9
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 5.0e-41 171.4 145 69.7
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 8.6e-41 170.6 115 81.7
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 1.1e-40 170.2 132 74.2
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 3.3e-40 168.7 120 78.3
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 1.2e-39 166.8 135 72.6
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 1.2e-39 166.8 132 70.5
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.6e-39 166.4 122 80.3
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.1e-39 166.0 125 78.4
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 4.7e-39 164.9 91 89.0
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 9.9e-37 157.1 145 66.2
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 4.9e-36 154.8 113 79.6
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 1.1e-35 153.7 98 86.7
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 4.1e-35 151.8 122 74.6
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 6.0e-34 147.9 142 59.9
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 1.3e-33 146.7 111 72.1
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 6.6e-33 144.4 103 79.6
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.6e-31 139.8 82 80.5
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 1.4e-27 126.7 121 62.0
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 1.4e-27 126.7 125 61.6
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 4.1e-27 125.2 106 75.5
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.1e-26 122.9 120 65.0
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.1e-26 122.9 120 65.0
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 4.6e-26 121.7 99 75.8
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 7.8e-26 120.9 69 82.6
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.0e-25 119.0 64 89.1
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.5e-24 116.7 144 55.6
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 4.3e-24 115.2 132 56.8
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 5.6e-24 114.8 132 55.3
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.6e-23 113.2 80 76.2
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 8.1e-23 110.9 77 76.6
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-22 110.5 76 77.6
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 2.9e-20 102.4 81 71.6
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 3.8e-20 102.1 98 60.2
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 2.3e-17 92.8 45 91.1
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 3.6e-15 85.5 76 68.4
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3
DCAR_013632 Daucus carota HOM05D003818 ORTHO05D175173 5.3e-06 55.1 78 51.3


User provided reference genes

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