Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G123600 Populus trichocarpa HOM05D006866 ORTHO05D008689 3.4e-112 409.8 194 100.0
Sabra12G0093800 Salix brachista HOM05D006866 ORTHO05D008689 1.0e-108 398.3 193 97.4
Sabra12G0093000 Salix brachista HOM05D000009 ORTHO05D000008 2.1e-90 337.4 194 85.6
Sabra12G0093100 Salix brachista HOM05D006866 ORTHO05D008689 1.9e-86 324.3 153 98.0
Gorai.011G048600 Gossypium raimondii HOM05D006866 ORTHO05D008689 1.3e-76 291.6 196 69.4
Haze_06061 Corylus avellana HOM05D006866 ORTHO05D008689 7.4e-75 285.8 193 67.9
Sopen02g017930 Solanum pennellii HOM05D006866 ORTHO05D008689 2.8e-74 283.9 194 67.0
Thecc.06G143300 Theobroma cacao HOM05D006866 ORTHO05D008689 3.7e-74 283.5 195 69.7
CAN.G149.30 Capsicum annuum HOM05D006866 ORTHO05D008689 4.8e-74 283.1 193 66.8
Duzib160G0228 Durio zibethinus HOM05D006866 ORTHO05D008689 4.8e-74 283.1 196 69.4
CiPaw.10G064300 Carya illinoinensis HOM05D006866 ORTHO05D008689 8.1e-74 282.3 192 67.7
Nitab4.5_0001288g0160 Nicotiana tabacum HOM05D006866 ORTHO05D008689 1.1e-73 282.0 201 65.2
Solyc02g068760.4 Solanum lycopersicum HOM05D006866 ORTHO05D008689 1.1e-73 282.0 193 66.8
Cfa000706 Carpinus fangiana HOM05D006866 ORTHO05D008689 2.4e-73 280.8 191 67.5
CSS0001165 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 4.0e-73 280.0 192 67.7
Gohir.A10G044500 Gossypium hirsutum HOM05D006866 ORTHO05D008689 5.3e-73 279.6 170 75.9
COL.COLO4_30996 Corchorus olitorius HOM05D006866 ORTHO05D008689 1.2e-72 278.5 187 69.5
TWI38G1826 Tripterygium wilfordii HOM05D006866 ORTHO05D008689 1.2e-72 278.5 192 69.8
Peaxi162Scf00149g00318 Petunia axillaris HOM05D006866 ORTHO05D008689 1.5e-72 278.1 194 66.0
CANSAT35G0964 Cannabis sativa HOM05D006866 ORTHO05D008689 2.6e-72 277.3 193 67.9
Gohir.D10G045700 Gossypium hirsutum HOM05D006866 ORTHO05D008689 3.4e-72 276.9 170 74.7
PGSC0003DMG400010422 Solanum tuberosum HOM05D006866 ORTHO05D008689 4.5e-72 276.6 194 65.5
CSS0037136 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 9.9e-72 275.4 192 67.7
Dinv01379 Davidia involucrata HOM05D006866 ORTHO05D008689 1.3e-71 275.0 192 68.2
Actinidia22399 Actinidia chinensis HOM05D006866 ORTHO05D008689 6.4e-71 272.7 192 65.6
Oeu060351.1 Olea europaea HOM05D006866 ORTHO05D008689 6.4e-71 272.7 183 67.2
GSVIVG01012065001 Vitis vinifera HOM05D006866 ORTHO05D008689 6.4e-71 272.7 192 66.1
TAR626G0654 Trochodendron aralioides HOM05D006866 ORTHO05D008689 1.2e-69 268.5 172 69.8
Prupe.4G112600 Prunus persica HOM05D006866 ORTHO05D008689 2.1e-69 267.7 194 65.5
Lalb_Chr02g0143291 Lupinus albus HOM05D006866 ORTHO05D008689 5.1e-68 263.1 189 63.5
Nn7g38175 Nelumbo nucifera HOM05D006866 ORTHO05D008689 6.7e-68 262.7 198 60.1
MD10G1231700 Malus domestica HOM05D006866 ORTHO05D008689 1.1e-67 261.9 170 71.2
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 2.1e-66 257.7 193 63.2
RcHm_v2.0_Chr5g0020151 Rosa chinensis HOM05D006866 ORTHO05D008689 6.2e-66 256.1 194 62.9
FAN21G0631 Fragaria x ananassa HOM05D006866 ORTHO05D008689 1.4e-65 255.0 194 62.4
FvH4_3g12360 Fragaria vesca HOM05D006866 ORTHO05D008689 4.0e-65 253.4 195 61.5
ECA232G0121 Erigeron canadensis HOM05D006866 ORTHO05D008689 5.3e-65 253.1 194 60.8
Ca_25672_v3 Cicer arietinum L. HOM05D006866 ORTHO05D008689 9.0e-65 252.3 194 60.3
Cc09_g06040 Coffea canephora HOM05D006866 ORTHO05D008689 1.2e-64 251.9 193 61.7
HanXRQChr09g0258331 Helianthus annuus HOM05D006866 ORTHO05D008689 2.0e-64 251.1 167 69.5
CsaV3_1G046260 Cucumis sativus L. HOM05D006866 ORTHO05D008689 7.6e-64 249.2 192 59.4
QL11p016582 Quercus lobata HOM05D006866 ORTHO05D008689 1.0e-63 248.8 228 53.9
DCAR_001319 Daucus carota HOM05D006866 ORTHO05D008689 1.3e-63 248.4 193 60.6
TPR.G2424 Trifolium pratense HOM05D006866 ORTHO05D008689 1.3e-63 248.4 187 61.5
Glyma.20G109800 Glycine max HOM05D006866 ORTHO05D008689 1.7e-63 248.1 192 60.9
MELO3C021744.2 Cucumis melo HOM05D006866 ORTHO05D008689 4.9e-63 246.5 192 59.4
Lj5g0008795 Lotus japonicus HOM05D006866 ORTHO05D008689 4.9e-63 246.5 191 60.2
Aqoxy1G01457 Aquilegia oxysepala HOM05D006866 ORTHO05D008689 6.5e-63 246.1 196 58.7
THA.LOC104814359 Tarenaya hassleriana HOM05D006866 ORTHO05D008689 1.1e-62 245.4 189 63.0
ClCG01G009530 Citrullus lanatus HOM05D006866 ORTHO05D008689 1.4e-62 245.0 191 59.2
Eucgr.D00981 Eucalyptus grandis HOM05D006866 ORTHO05D008689 1.4e-62 245.0 190 65.3
Psat6g231320 Pisum sativum HOM05D006866 ORTHO05D008689 1.4e-62 245.0 193 59.1
VMungo0720G0148 Vigna mungo HOM05D006866 ORTHO05D008689 2.5e-62 244.2 187 59.9
arahy.Tifrunner.gnm1.ann1.X32MFV Arachis hypogaea HOM05D006866 ORTHO05D008689 4.2e-62 243.4 187 59.4
Thhalv10017758m.g Eutrema salsugineum HOM05D006866 ORTHO05D008689 4.2e-62 243.4 187 62.0
AL4G31140 Arabidopsis lyrata HOM05D006866 ORTHO05D008689 9.3e-62 242.3 193 59.6
Aa31LG9G16090 Aethionema arabicum HOM05D006866 ORTHO05D008689 1.2e-61 241.9 188 61.7
EL10Ac4g09707 Beta vulgaris HOM05D006866 ORTHO05D008689 1.2e-61 241.9 159 66.0
vmacro03523 Vaccinium macrocarpon HOM05D006866 ORTHO05D008689 1.6e-61 241.5 220 54.5
BolC4t22960H Brassica oleracea HOM05D006866 ORTHO05D008689 2.7e-61 240.7 166 65.7
BcaB02g09476 Brassica carinata HOM05D006866 ORTHO05D008689 4.6e-61 240.0 166 65.7
C04p13710 Brassica napus HOM05D006866 ORTHO05D008689 4.6e-61 240.0 166 65.7
Sp4g17360 Schrenkiella parvula HOM05D006866 ORTHO05D008689 4.6e-61 240.0 187 61.0
Carub.0004s1681 Capsella rubella HOM05D006866 ORTHO05D008689 6.0e-61 239.6 167 64.1
Nitab4.5_0007533g0010 Nicotiana tabacum HOM05D006866 ORTHO05D008689 6.0e-61 239.6 167 65.9
MBI18_g11481_MAGBIO Magnolia biondii HOM05D006866 ORTHO05D008689 7.9e-61 239.2 196 58.7
A05p10610 Brassica napus HOM05D006866 ORTHO05D008689 1.0e-60 238.8 188 60.6
BraA05t20001Z Brassica rapa HOM05D006866 ORTHO05D008689 1.0e-60 238.8 188 60.6
Migut.M01983 Erythranthe guttata HOM05D006866 ORTHO05D008689 1.0e-60 238.8 197 59.4
Sed0016966 Sechium edule HOM05D006866 ORTHO05D003855 1.3e-60 238.4 183 60.1
AT2G35130 Arabidopsis thaliana HOM05D006866 ORTHO05D008689 1.8e-60 238.0 187 61.0
AUR62006933 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.0e-60 237.3 184 57.6
AUR62006935 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.0e-60 237.3 184 57.6
FAN25G0624 Fragaria x ananassa HOM05D006866 ORTHO05D008689 3.0e-60 237.3 194 59.8
TPR.G2448 Trifolium pratense HOM05D006866 ORTHO05D008689 6.7e-60 236.1 218 52.8
Medtr1g112240 Medicago truncatula HOM05D006866 ORTHO05D008689 9.7e-59 232.3 168 63.7
Phvul.007G021100 Phaseolus vulgaris HOM05D006866 ORTHO05D008689 1.3e-58 231.9 170 61.8
Cpa.g.sc135.7 Carica papaya HOM05D006866 ORTHO05D008689 2.0e-56 224.6 131 77.9
Lsat_1_v5_gn_8_117320 Lactuca sativa HOM05D006866 ORTHO05D008689 3.4e-56 223.8 136 75.7
PSO675G2302 Papaver somniferum HOM05D006866 ORTHO05D008689 1.7e-55 221.5 183 56.3
PSO541G3299 Papaver somniferum HOM05D006866 ORTHO05D008689 2.9e-55 220.7 166 60.2
CARHR129270 Cardamine hirsuta HOM05D006866 ORTHO05D008689 8.5e-55 219.2 138 71.0
CDE01G0264 Ceratophyllum demersum HOM05D006866 ORTHO05D008689 7.2e-54 216.1 191 55.0
ATR0763G194 Amborella trichopoda HOM05D006866 ORTHO05D008689 1.6e-53 214.9 154 63.0
EL10Ac8g19312 Beta vulgaris HOM05D006866 ORTHO05D008689 2.0e-51 208.0 159 59.7
Lj2A350T60 Lonicera japonica HOM05D006866 ORTHO05D008689 3.3e-51 207.2 208 52.4
Zm00001eb233080 Zea mays HOM05D006866 ORTHO05D008689 3.3e-51 207.2 154 59.7
arahy.Tifrunner.gnm1.ann1.0F554D Arachis hypogaea HOM05D006866 ORTHO05D008689 3.8e-47 193.7 187 50.3
AUR62000579 Chenopodium quinoa HOM05D006866 ORTHO05D008689 3.0e-44 184.1 179 52.0
PGR004G0545 Punica granatum HOM05D006866 ORTHO05D008689 4.8e-42 176.8 159 52.8
Sabra12G0092900 Salix brachista HOM05D000009 ORTHO05D000008 3.1e-41 174.1 131 66.4
HanXRQChr10g0279011 Helianthus annuus HOM05D006866 ORTHO05D008689 2.3e-36 157.9 131 58.8
Lsat_1_v5_gn_6_52341 Lactuca sativa HOM05D006866 ORTHO05D008689 7.0e-33 146.4 107 66.4
Os02g0170000 Oryza sativa ssp. japonica HOM05D006866 ORTHO05D008689 8.5e-31 139.4 111 59.5
Manes.13G080558 Manihot esculenta HOM05D006866 ORTHO05D008689 2.5e-30 137.9 76 82.9
SMO165G0132 Selaginella moellendorffii HOM05D006866 ORTHO05D008689 1.5e-22 112.1 131 38.2
AagrBONN_evm.TU.Sc2ySwM_368.1444 Anthoceros agrestis HOM05D006866 ORTHO05D008689 9.4e-22 109.4 128 38.3
Mapoly0002s0014 Marchantia polymorpha HOM05D006866 ORTHO05D008689 6.8e-20 103.2 136 36.8
Pp3c6_26210 Physcomitrium patens HOM05D006866 ORTHO05D008689 6.3e-18 96.7 139 36.0
CSS0019706 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 2.4e-17 94.7 55 72.7
Lsat_1_v5_gn_3_50301 Lactuca sativa HOM05D006866 ORTHO05D008689 1.2e-16 92.4 55 76.4
RhsimUnG0235100 Rhododendron simsii HOM05D006866 ORTHO05D008689 4.5e-16 90.5 53 73.6
Pp3c16_5890 Physcomitrium patens HOM05D006866 ORTHO05D008689 7.7e-16 89.7 136 35.3
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 5.0e-15 87.0 72 55.6
Lsat_1_v5_gn_8_128381 Lactuca sativa HOM05D006866 ORTHO05D008689 9.5e-14 82.8 52 75.0
Haze_06053 Corylus avellana HOM05D006866 ORTHO05D008689 1.5e-11 75.5 193 31.6
Cfa008015 Carpinus fangiana HOM05D000082 ORTHO05D008689 3.7e-10 70.9 107 41.1
Ciclev10015335m.g Citrus clementina HOM05D006866 ORTHO05D008689 4.9e-10 70.5 39 79.5
CARHR141110 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.1e-09 69.3 50 56.0
CAN.G1114.2 Capsicum annuum HOM05D006866 ORTHO05D008689 7.0e-09 66.6 41 70.7
CSS0001056 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 9.2e-09 66.2 38 84.2
CSS0048441 Camellia sinensis var. sinensis HOM05D006866 ORTHO05D008689 9.2e-09 66.2 38 84.2
CARHR180830 Cardamine hirsuta HOM05D006866 ORTHO05D008689 1.0e-07 62.8 46 56.5
Haze_06062 Corylus avellana HOM05D006866 ORTHO05D008689 3.3e-06 57.8 35 77.1


User provided reference genes

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