Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G047500 Populus trichocarpa HOM05D002578 ORTHO05D005154 2.3e-50 201.8 96 100.0
PSO548G0101 Papaver somniferum HOM05D002578 ORTHO05D005154 2.4e-39 165.2 95 80.0
TAR375G1061 Trochodendron aralioides HOM05D002578 ORTHO05D005154 5.4e-39 164.1 95 80.0
Gohir.D11G067600 Gossypium hirsutum HOM05D002578 ORTHO05D005154 2.7e-38 161.8 95 76.8
Hma1.2p1_0298F.1_g117740 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 3.5e-38 161.4 95 78.9
Hma1.2p1_0818F.1_g223306 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 3.5e-38 161.4 95 78.9
ATCG00800 Arabidopsis thaliana HOM05D002578 ORTHO05D005154 5.9e-38 160.6 95 75.8
Thhalv10010706m.g Eutrema salsugineum HOM05D002578 ORTHO05D005154 5.9e-38 160.6 95 74.7
BNapus_Darmor_BZH_scaffold_253p00370 Brassica napus HOM05D002578 ORTHO05D005154 7.8e-38 160.2 95 75.8
C03p38130 Brassica napus HOM05D002578 ORTHO05D005154 7.8e-38 160.2 95 75.8
BolSC29t60532H Brassica oleracea HOM05D002578 ORTHO05D005154 7.8e-38 160.2 95 75.8
BolSC35t60726H Brassica oleracea HOM05D002578 ORTHO05D005154 7.8e-38 160.2 95 75.8
BolSC56t61245H Brassica oleracea HOM05D002578 ORTHO05D005154 7.8e-38 160.2 95 75.8
BraA06t25386Z Brassica rapa HOM05D002578 ORTHO05D005154 7.8e-38 160.2 95 75.8
BraSC103t45443Z Brassica rapa HOM05D002578 ORTHO05D005154 7.8e-38 160.2 95 75.8
BraSC103t45487Z Brassica rapa HOM05D002578 ORTHO05D005154 7.8e-38 160.2 95 75.8
BraSC138t45551Z Brassica rapa HOM05D002578 ORTHO05D005154 7.8e-38 160.2 95 75.8
BraSC59t46568Z Brassica rapa HOM05D002578 ORTHO05D005154 7.8e-38 160.2 95 75.8
Hma1.2p1_0104F.1_g050140 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 7.8e-38 160.2 95 78.9
CARHR282270 Cardamine hirsuta HOM05D002578 ORTHO05D005154 1.0e-37 159.8 95 74.7
Gohir.1Z049834 Gossypium hirsutum HOM05D002578 ORTHO05D005154 1.3e-37 159.5 95 75.8
Gohir.A12G024500 Gossypium hirsutum HOM05D002578 ORTHO05D005154 1.3e-37 159.5 95 75.8
HanXRQChr00c0557g0575711 Helianthus annuus HOM05D002578 ORTHO05D005154 2.3e-37 158.7 95 77.9
PGR111G0034 Punica granatum HOM05D002578 ORTHO05D005154 2.3e-37 158.7 95 76.8
CAN.G424.95 Capsicum annuum HOM05D002578 ORTHO05D005154 8.6e-37 156.8 95 75.8
HanXRQChr16g0526141 Helianthus annuus HOM05D002578 ORTHO05D005154 1.5e-36 156.0 95 76.8
LjContig00318g0021445 Lotus japonicus HOM05D002578 ORTHO05D005154 1.9e-36 155.6 95 74.7
LjContig00319g0008344 Lotus japonicus HOM05D002578 ORTHO05D005154 1.9e-36 155.6 95 74.7
LjContig00319g0015839 Lotus japonicus HOM05D002578 ORTHO05D005154 1.9e-36 155.6 95 74.7
Duzib026G0002 Durio zibethinus HOM05D002578 ORTHO05D005154 2.5e-36 155.2 95 75.8
Duzib086G0007 Durio zibethinus HOM05D002578 ORTHO05D005154 2.5e-36 155.2 95 75.8
Duzib125G0004 Durio zibethinus HOM05D002578 ORTHO05D005154 2.5e-36 155.2 95 75.8
Duzib256G0002 Durio zibethinus HOM05D002578 ORTHO05D005154 2.5e-36 155.2 95 75.8
CSS0047935 Camellia sinensis var. sinensis HOM05D002578 ORTHO05D005154 7.3e-36 153.7 95 74.7
DCAR_032524 Daucus carota HOM05D002578 ORTHO05D005154 1.6e-35 152.5 95 75.8
HanXRQChr14g0432301 Helianthus annuus HOM05D002578 ORTHO05D005154 2.8e-35 151.8 95 74.7
Gorai.010G148900 Gossypium raimondii HOM05D002578 ORTHO05D005154 3.6e-35 151.4 95 72.6
SalBow1G1132 Salvia bowleyana HOM05D002578 ORTHO05D005154 6.1e-35 150.6 95 70.5
Cpa.g.sc0.194 Carica papaya HOM05D002578 ORTHO05D005154 1.8e-34 149.1 95 74.7
Gohir.A08G071000 Gossypium hirsutum HOM05D002578 ORTHO05D005154 1.8e-34 149.1 95 72.6
Sed0023475 Sechium edule HOM05D002578 ORTHO05D005154 5.2e-34 147.5 95 71.6
CAN.G127.12 Capsicum annuum HOM05D002578 ORTHO05D005154 8.9e-34 146.7 95 70.5
Lsat_1_v5_gn_5_50461 Lactuca sativa HOM05D002578 ORTHO05D005154 4.4e-33 144.4 95 69.5
Hund08206 Selenicereus undatus HOM05D002578 ORTHO05D005154 9.8e-33 143.3 100 71.0
Hund29530 Selenicereus undatus HOM05D002578 ORTHO05D005154 9.8e-33 143.3 100 71.0
arahy.Tifrunner.gnm1.ann1.ID3W56 Arachis hypogaea HOM05D002578 ORTHO05D005154 1.3e-32 142.9 95 72.6
arahy.Tifrunner.gnm1.ann1.R0YUWC Arachis hypogaea HOM05D002578 ORTHO05D005154 2.2e-32 142.1 95 72.6
Eucgr.C03015 Eucalyptus grandis HOM05D002578 ORTHO05D005154 2.9e-32 141.7 95 70.5
Nitab4.5_0004430g0040 Nicotiana tabacum HOM05D002578 ORTHO05D005154 2.9e-32 141.7 95 71.6
Potri.017G072340 Populus trichocarpa HOM05D002578 ORTHO05D005154 1.9e-31 139.0 95 76.8
Hund29503 Selenicereus undatus HOM05D002578 ORTHO05D005154 1.9e-31 139.0 99 69.7
Ah.10g027440 Amaranthus hybridus HOM05D002578 ORTHO05D005154 1.2e-30 136.3 86 70.9
HanXRQChr01g0020181 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-30 135.6 84 76.2
HanXRQChr04g0127451 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-30 135.6 84 76.2
HanXRQChr10g0284421 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-30 135.6 84 76.2
HanXRQChr10g0318021 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-30 135.6 84 76.2
HanXRQChr12g0369891 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-30 135.6 84 76.2
HanXRQCPg0580221 Helianthus annuus HOM05D002578 ORTHO05D005154 2.0e-30 135.6 84 76.2
Sc25g0002070 Simmondsia chinensis HOM05D002578 ORTHO05D005154 2.0e-30 135.6 84 75.0
Nitab4.5_0013360g0010 Nicotiana tabacum HOM05D002578 ORTHO05D005154 4.6e-30 134.4 84 73.8
Hund30213 Selenicereus undatus HOM05D002578 ORTHO05D005154 4.6e-30 134.4 87 75.9
Solyc00g500034.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 1.3e-29 132.9 84 71.4
arahy.Tifrunner.gnm1.ann1.I6CLRS Arachis hypogaea HOM05D002578 ORTHO05D005154 3.0e-29 131.7 92 69.6
Medtr4g051410 Medicago truncatula HOM05D002578 ORTHO05D005154 5.0e-29 131.0 95 66.3
Migut.D01327 Erythranthe guttata HOM05D002578 ORTHO05D005154 6.6e-29 130.6 73 84.9
Lsat_1_v5_gn_3_22620 Lactuca sativa HOM05D002578 ORTHO05D005154 8.6e-29 130.2 84 72.6
Peaxi162Scf00299g00118 Petunia axillaris HOM05D002578 ORTHO05D005154 8.6e-29 130.2 84 71.4
Oeu062830.1 Olea europaea HOM05D002578 ORTHO05D005154 1.5e-28 129.4 95 67.4
Lsat_1_v5_gn_3_113300 Lactuca sativa HOM05D002578 ORTHO05D005154 7.3e-28 127.1 84 71.4
Zm00001eb039190 Zea mays HOM05D002578 ORTHO05D005154 1.6e-27 125.9 103 63.1
Zm00001eb097380 Zea mays HOM05D002578 ORTHO05D005154 1.6e-27 125.9 103 63.1
Zm00001eb115040 Zea mays HOM05D002578 ORTHO05D005154 1.6e-27 125.9 103 63.1
Zm00001eb434870 Zea mays HOM05D002578 ORTHO05D005154 1.6e-27 125.9 103 63.1
Zm00001eb435100 Zea mays HOM05D002578 ORTHO05D005154 1.6e-27 125.9 103 63.1
Zm00001eb435640 Zea mays HOM05D002578 ORTHO05D005154 1.6e-27 125.9 103 63.1
Zm00001eb437960 Zea mays HOM05D002578 ORTHO05D005154 1.6e-27 125.9 103 63.1
Zm00001eb439940 Zea mays HOM05D002578 ORTHO05D005154 1.6e-27 125.9 103 63.1
Zm00001eb439960 Zea mays HOM05D002578 ORTHO05D005154 1.6e-27 125.9 103 63.1
Zm00001eb440780 Zea mays HOM05D002578 ORTHO05D005154 1.6e-27 125.9 103 63.1
arahy.Tifrunner.gnm1.ann1.YJ6L74 Arachis hypogaea HOM05D002578 ORTHO05D005154 2.8e-27 125.2 86 70.9
Hund28761 Selenicereus undatus HOM05D002578 ORTHO05D005154 3.4e-25 118.2 95 63.2
CAN.G134.2 Capsicum annuum HOM05D002578 ORTHO05D005154 1.3e-24 116.3 68 77.9
Gohir.D06G105066 Gossypium hirsutum HOM05D002578 ORTHO05D005154 2.9e-24 115.2 96 58.3
PGSC0003DMG400003499 Solanum tuberosum HOM05D002578 ORTHO05D005154 2.7e-22 108.6 60 80.0
Medtr0002s0790 Medicago truncatula HOM05D002578 ORTHO05D005154 7.8e-22 107.1 118 50.8
Lalb_Chr25g0282891 Lupinus albus HOM05D002578 ORTHO05D005154 3.0e-21 105.1 67 71.6
CAN.G1078.3 Capsicum annuum HOM05D002578 ORTHO05D005154 3.9e-21 104.8 70 68.6
Gorai.001G190500 Gossypium raimondii HOM05D002578 ORTHO05D002698 1.5e-20 102.8 62 75.8
Lsat_1_v5_gn_5_168100 Lactuca sativa HOM05D002578 ORTHO05D005154 1.5e-20 102.8 84 61.9
Psat4g046880 Pisum sativum HOM05D002578 ORTHO05D005154 3.3e-20 101.7 102 52.0
HanXRQChr16g0503681 Helianthus annuus HOM05D002578 ORTHO05D005154 7.3e-20 100.5 89 58.4
Lalb_Chr17g0337521 Lupinus albus HOM05D002578 ORTHO05D005154 1.2e-19 99.8 67 67.2
Medtr8g038470 Medicago truncatula HOM05D002578 ORTHO05D005154 1.6e-19 99.4 73 64.4
Aqoxy5G00925 Aquilegia oxysepala HOM05D002578 ORTHO05D005154 8.1e-19 97.1 64 71.9
Atru.chr11.440 Acer truncatum HOM05D002578 ORTHO05D005154 5.2e-18 94.4 58 77.6
Sed0004436 Sechium edule HOM05D002578 ORTHO05D005154 1.2e-17 93.2 95 51.6
Solyc12g035880.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 7.6e-17 90.5 71 57.7
HanXRQChr11g0321141 Helianthus annuus HOM05D002578 ORTHO05D002698 1.1e-15 86.7 48 81.2
BraSC58t46504Z Brassica rapa HOM05D002578 ORTHO05D005154 1.3e-13 79.7 49 69.4
Lalb_Chr23g0274271 Lupinus albus HOM05D002578 ORTHO05D005154 2.1e-11 72.4 49 67.3
Nn4g25225 Nelumbo nucifera HOM05D002578 ORTHO05D005154 2.1e-11 72.4 48 70.8
SMO086G0021 Selaginella moellendorffii HOM05D002578 ORTHO05D005154 2.1e-11 72.4 99 35.4
Gohir.A09G101600 Gossypium hirsutum HOM05D002578 ORTHO05D005154 6.2e-11 70.9 45 68.9
Gorai.011G034100 Gossypium raimondii HOM05D002578 ORTHO05D005154 6.2e-11 70.9 45 68.9
Gohir.A12G090125 Gossypium hirsutum HOM05D002578 ORTHO05D005154 5.2e-10 67.8 44 68.2
arahy.Tifrunner.gnm1.ann1.HB4K1E Arachis hypogaea HOM05D002578 ORTHO05D005154 1.5e-09 66.2 38 78.9
Sc16g0004460 Simmondsia chinensis HOM05D002578 ORTHO05D005154 2.0e-09 65.9 45 66.7
MELO3C004853.2 Cucumis melo HOM05D002578 ORTHO05D005154 1.7e-08 62.8 95 37.9
AL2G20530 Arabidopsis lyrata HOM05D002578 ORTHO05D005154 2.2e-08 62.4 39 69.2
AL2G21750 Arabidopsis lyrata HOM05D002578 ORTHO05D005154 2.2e-08 62.4 39 69.2
Gorai.012G056700 Gossypium raimondii HOM05D002578 ORTHO05D005154 4.9e-08 61.2 43 62.8
AL1G45070 Arabidopsis lyrata HOM05D002578 ORTHO05D005154 8.4e-08 60.5 39 66.7
Gohir.D04G051050 Gossypium hirsutum HOM05D002578 ORTHO05D005154 3.2e-07 58.5 43 60.5
Nn4g25226 Nelumbo nucifera HOM05D002578 ORTHO05D005154 4.2e-07 58.2 26 92.3
Nn7g37550 Nelumbo nucifera HOM05D002578 ORTHO05D005154 4.2e-07 58.2 26 92.3
Solyc11g039530.2 Solanum lycopersicum HOM05D002578 ORTHO05D005154 6.0e-06 54.3 45 55.6


User provided reference genes

Program Settings