Gene: Duzib026G0002
General Information
Structural Information
- Species Durio zibethinus
- Gene Identifier Duzib026G0002
- Transcript Identifier Duzib026G0002.01
- Gene Type Coding gene
- Location NW_019168335.1 : 15685-18672 : negative
Gene Family Information
- ID HOM05D002578
- #Genes/#Species 264/71
- Phylogenetic origin
- ID ORTHO05D005154
- #Genes/#Species 163/55
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name LOC111289179
- name XM_022880030.1
- pid XP_022735765.1
- id gene-LOC111289179
Descriptions
- product 30S ribosomal protein S3, chloroplastic-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0019843 | IEA | InterPro | rRNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00800 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015934 | IEA | InterPro | large ribosomal subunit | |
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | ATCG00800 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00800 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | ATCG00800 |
| GO:0000312 | ISO | PLAZA Integrative Orthology | plastid small ribosomal subunit | ATCG00800 |
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | ATCG00800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036419 | Ribosomal protein S3, C-terminal domain superfamily |
| IPR000114 | Ribosomal protein L16 |
| IPR005745 | Ribosomal protein L14P, bacterial-type |
| IPR036853 | Ribosomal protein L14 superfamily |
| IPR009019 | K homology domain superfamily, prokaryotic type |
| IPR005704 | Ribosomal protein S3, bacterial-type |
| IPR016180 | Ribosomal protein L10e/L16 |
| IPR036920 | Ribosomal protein L10e/L16 superfamily |
| IPR001351 | Ribosomal protein S3, C-terminal |
| IPR000218 | Ribosomal protein L14P |
| IPR015946 | K homology domain-like, alpha/beta |
| Mapman id | Description |
|---|---|
| 17.7.2.1.12 | Protein biosynthesis.organelle machinery.plastidial ribosome.large ribosomal subunit proteome.component psRPL14 |
| 17.7.2.2.3 | Protein biosynthesis.organelle machinery.plastidial ribosome.small ribosomal subunit proteome.component psRPS3 |