Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 3.2e-121 438.3 209 100.0
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 1.4e-111 406.4 209 92.8
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 8.2e-109 397.1 209 91.4
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 2.4e-108 395.6 209 91.4
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 2.2e-106 389.0 209 89.0
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 8.5e-106 387.1 209 88.5
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 2.5e-105 385.6 209 87.1
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 3.2e-105 385.2 209 88.0
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 5.5e-105 384.4 209 88.0
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 9.4e-105 383.6 209 86.6
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 9.4e-105 383.6 209 86.6
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 9.4e-105 383.6 209 86.1
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 1.6e-104 382.9 209 88.0
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 2.7e-104 382.1 209 88.5
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 4.7e-104 381.3 209 88.0
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 4.7e-104 381.3 288 68.8
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 1.4e-103 379.8 209 86.6
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 3.0e-103 378.6 209 87.1
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 5.2e-103 377.9 209 86.1
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 6.7e-103 377.5 209 85.2
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 8.8e-103 377.1 209 85.6
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 8.8e-103 377.1 209 86.1
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 1.1e-102 376.7 209 85.6
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 1.1e-102 376.7 209 86.1
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.0e-102 375.9 209 89.0
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 2.6e-102 375.6 209 86.1
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 3.3e-102 375.2 209 85.2
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 3.3e-102 375.2 209 85.6
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 5.7e-102 374.4 209 85.2
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 85.2
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 9.7e-102 373.6 209 85.2
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 9.7e-102 373.6 209 85.2
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 9.7e-102 373.6 209 85.2
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 83.3
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 84.2
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 2.2e-101 372.5 209 85.2
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 2.8e-101 372.1 209 84.7
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 83.3
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 85.6
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 6.3e-101 370.9 209 84.7
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 8.2e-101 370.5 209 85.2
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 1.4e-100 369.8 209 84.7
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 1.4e-100 369.8 209 84.7
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 84.2
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 84.7
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 5.3e-100 367.9 209 82.8
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 9.1e-100 367.1 209 84.2
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 9.1e-100 367.1 209 85.2
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 1.6e-99 366.3 209 82.8
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 1.6e-99 366.3 209 83.3
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 83.7
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 4.5e-99 364.8 209 83.3
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 4.5e-99 364.8 209 81.8
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 4.5e-99 364.8 209 81.8
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.0e-98 363.6 209 83.7
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 1.3e-98 363.2 209 83.7
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 1.3e-98 363.2 209 84.2
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 2.9e-98 362.1 209 81.3
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.9e-98 362.1 209 83.7
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 83.3
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 83.7
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 83.3
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 83.3
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 5.0e-98 361.3 209 83.3
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 5.0e-98 361.3 225 78.7
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 6.5e-98 360.9 209 82.8
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 6.5e-98 360.9 208 81.2
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 8.5e-98 360.5 209 83.7
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 1.1e-97 360.1 209 83.3
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 3.2e-97 358.6 210 82.9
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 4.2e-97 358.2 209 82.3
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 4.2e-97 358.2 209 82.8
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 7.2e-97 357.5 209 82.8
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 7.2e-97 357.5 209 82.3
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 9.4e-97 357.1 209 81.8
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 3.6e-96 355.1 209 81.8
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 8.0e-96 354.0 208 80.8
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 2.3e-95 352.4 190 88.4
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 3.0e-95 352.1 209 81.3
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 4.0e-95 351.7 221 79.2
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 5.2e-95 351.3 209 79.9
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.3e-93 346.7 230 76.5
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 2.8e-93 345.5 243 71.2
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 3.7e-93 345.1 209 78.5
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.1e-92 343.6 230 75.7
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 3.1e-92 342.0 209 78.0
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 3.1e-92 342.0 187 86.6
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 7.0e-92 340.9 240 72.9
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 1.2e-91 340.1 193 83.9
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 2.7e-91 339.0 185 87.0
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 5.9e-91 337.8 209 76.6
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 7.7e-91 337.4 190 83.2
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 1.5e-89 333.2 209 78.5
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 5.5e-89 331.3 189 81.0
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 5.5e-89 331.3 191 83.8
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 2.7e-88 328.9 187 85.0
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 3.6e-88 328.6 187 84.5
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 8.0e-88 327.4 208 71.6
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 1.8e-87 326.2 209 75.1
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 2.2e-85 319.3 206 73.3
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 4.1e-84 315.1 209 71.3
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 1.0e-82 310.5 206 70.9
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.2e-78 297.0 211 71.6
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 1.2e-78 297.0 197 74.6
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 5.7e-78 294.7 205 66.8
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 2.5e-73 279.3 165 80.0
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 8.0e-72 274.2 165 80.0
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 4.9e-69 265.0 151 82.8
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 7.8e-67 257.7 204 61.8
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 3.0e-66 255.8 209 65.1
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 1.6e-64 250.0 179 68.2
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 2.8e-64 249.2 208 59.6
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 3.4e-62 242.3 210 56.2
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 5.8e-62 241.5 167 69.5
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 6.6e-58 228.0 135 80.0
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 1.8e-55 219.9 206 53.9
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 4.3e-49 198.7 152 65.1
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 2.4e-47 193.0 206 48.1
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 3.6e-40 169.1 149 61.1
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 6.2e-40 168.3 207 40.1
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 2.4e-36 156.4 84 88.1
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 8.7e-34 147.9 84 83.3
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 1.9e-33 146.7 143 58.0
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 9.6e-33 144.4 136 49.3
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 2.8e-32 142.9 135 51.1
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 7.9e-27 124.8 227 33.9
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.9e-25 120.2 74 77.0
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 2.8e-16 89.7 43 93.0
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 3.7e-16 89.4 76 60.5


User provided reference genes

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