Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 2.2e-82 308.9 158 100.0
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 1.2e-35 153.7 163 55.8
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 2.0e-35 152.9 163 57.1
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 1.0e-34 150.6 163 54.6
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 3.8e-34 148.7 163 55.2
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 3.8e-34 148.7 163 54.0
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 8.6e-34 147.5 163 55.2
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 1.1e-33 147.1 163 54.6
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 3.3e-33 145.6 160 53.8
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 4.3e-33 145.2 163 53.4
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 4.3e-33 145.2 165 53.3
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 5.6e-33 144.8 163 54.6
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 7.3e-33 144.4 163 53.4
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 3.6e-32 142.1 163 52.1
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 3.6e-32 142.1 163 53.4
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 6.1e-32 141.4 164 53.0
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 8.0e-32 141.0 163 52.8
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 1.0e-31 140.6 163 52.1
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 1.0e-31 140.6 163 51.5
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 1.0e-31 140.6 163 52.8
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 1.4e-31 140.2 163 53.4
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 1.4e-31 140.2 163 53.4
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 1.4e-31 140.2 160 53.8
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 1.8e-31 139.8 163 52.1
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 2.3e-31 139.4 159 52.8
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 2.3e-31 139.4 107 72.0
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 3.0e-31 139.0 163 52.8
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 3.0e-31 139.0 163 51.5
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 3.0e-31 139.0 164 50.6
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 3.0e-31 139.0 163 50.3
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 3.0e-31 139.0 159 53.5
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 5.2e-31 138.3 163 50.9
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 5.2e-31 138.3 163 50.9
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 6.8e-31 137.9 162 51.9
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 6.8e-31 137.9 163 51.5
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 8.9e-31 137.5 163 52.1
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 1.2e-30 137.1 164 50.0
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 1.5e-30 136.7 163 50.9
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.5e-30 136.7 164 51.2
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 1.5e-30 136.7 163 50.9
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 2.0e-30 136.3 164 50.6
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 2.0e-30 136.3 173 49.1
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 2.6e-30 136.0 172 48.8
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 3.4e-30 135.6 160 50.0
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 3.4e-30 135.6 163 50.9
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 3.4e-30 135.6 163 49.7
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 4.4e-30 135.2 163 51.5
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 4.4e-30 135.2 163 51.5
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 9.8e-30 134.0 150 53.3
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 9.8e-30 134.0 160 50.6
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 9.8e-30 134.0 160 49.4
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 1.3e-29 133.7 157 52.9
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 1.3e-29 133.7 163 50.3
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 1.7e-29 133.3 163 50.3
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 1.7e-29 133.3 163 49.7
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 2.2e-29 132.9 163 49.7
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 2.2e-29 132.9 163 50.3
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 2.9e-29 132.5 163 49.1
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 4.9e-29 131.7 160 49.4
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 8.3e-29 131.0 148 50.0
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 1.1e-28 130.6 163 49.7
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 3.2e-28 129.0 109 63.3
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 3.2e-28 129.0 163 47.2
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 3.2e-28 129.0 179 47.5
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 4.1e-28 128.6 137 54.0
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 5.4e-28 128.3 160 48.1
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 5.4e-28 128.3 160 48.1
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 7.0e-28 127.9 163 47.9
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 9.2e-28 127.5 159 47.8
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 1.6e-27 126.7 163 48.5
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 4.6e-27 125.2 203 41.9
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 5.9e-27 124.8 152 50.0
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 5.9e-27 124.8 163 48.5
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 5.9e-27 124.8 163 48.5
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 5.9e-27 124.8 163 49.1
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 1.0e-26 124.0 163 46.6
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 1.0e-26 124.0 164 46.3
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 2.3e-26 122.9 157 49.0
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 2.3e-26 122.9 148 48.6
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 3.0e-26 122.5 156 46.2
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 3.9e-26 122.1 109 61.5
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 5.0e-26 121.7 159 47.8
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 6.6e-26 121.3 150 49.3
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 1.9e-25 119.8 152 48.0
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 4.3e-25 118.6 155 45.8
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 4.3e-25 118.6 155 45.8
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 4.3e-25 118.6 155 45.8
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 4.3e-25 118.6 155 45.8
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 4.3e-25 118.6 155 45.8
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 2.1e-24 116.3 167 46.7
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 1.8e-23 113.2 117 57.3
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 8.9e-23 110.9 147 47.6
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 1.2e-22 110.5 97 60.8
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 3.4e-22 109.0 132 45.5
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 3.4e-22 109.0 94 61.7
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 9.8e-22 107.5 94 61.7
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 9.8e-22 107.5 94 61.7
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 2.2e-21 106.3 94 60.6
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 1.1e-20 104.0 93 61.3
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.9e-20 103.2 78 66.7
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 2.4e-20 102.8 80 66.2
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 7.0e-20 101.3 136 44.9
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 9.2e-20 100.9 132 43.9
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.6e-19 100.1 136 44.1
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.6e-19 100.1 136 44.1
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 1.5e-17 93.6 94 55.3
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 1.9e-17 93.2 163 35.6
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 2.3e-15 86.3 150 36.7
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 8.3e-13 77.8 106 45.3
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 1.6e-11 73.6 137 32.8
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 7.3e-09 64.7 94 38.3


User provided reference genes

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