Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 2.7e-266 921.4 458 100.0
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 1.7e-244 849.0 460 88.5
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 5.2e-233 810.8 453 87.9
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.5e-232 809.3 446 86.3
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.3e-231 806.2 462 83.8
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.3e-231 806.2 453 85.7
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 6.4e-231 803.9 450 85.6
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.1e-230 803.1 459 84.7
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 1.9e-230 802.4 458 83.6
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 5.4e-230 800.8 453 84.1
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 2.1e-229 798.9 453 83.7
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 2.1e-229 798.9 433 86.6
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 1.3e-228 796.2 462 82.9
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 5.1e-228 794.3 453 83.7
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 6.6e-228 793.9 447 86.6
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 1.5e-227 792.7 424 88.2
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 2.5e-227 792.0 424 87.0
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 3.3e-227 791.6 456 82.7
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 4.3e-227 791.2 459 83.0
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 5.6e-227 790.8 461 84.2
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.6e-226 789.3 424 87.5
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 3.6e-226 788.1 434 85.7
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 3.6e-226 788.1 433 85.7
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 4.7e-226 787.7 435 85.7
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 6.2e-226 787.3 424 88.4
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 1.1e-225 786.6 449 83.3
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 1.4e-225 786.2 424 86.6
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.4e-225 786.2 429 85.5
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 3.1e-225 785.0 423 86.8
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 3.1e-225 785.0 424 87.0
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 4.0e-225 784.6 422 86.3
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 6.8e-225 783.9 457 82.3
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 8.9e-225 783.5 448 82.6
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 1.5e-224 782.7 424 86.6
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 1.5e-224 782.7 424 87.7
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 2.0e-224 782.3 455 81.3
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 2.6e-224 781.9 424 87.7
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 3.4e-224 781.6 453 81.9
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 3.4e-224 781.6 451 82.5
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 4.4e-224 781.2 456 81.4
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 9.9e-224 780.0 424 86.8
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 2.9e-223 778.5 427 85.2
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.8e-223 778.1 424 87.7
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 3.8e-223 778.1 433 84.5
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 4.9e-223 777.7 452 83.0
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 6.4e-223 777.3 451 81.8
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 6.4e-223 777.3 425 87.5
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 1.9e-222 775.8 442 83.9
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.4e-222 775.4 557 74.0
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 7.1e-222 773.9 424 85.1
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 1.2e-221 773.1 457 80.5
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 2.7e-221 771.9 424 84.7
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 3.5e-221 771.5 476 78.8
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 3.5e-221 771.5 453 81.5
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.6e-221 771.2 424 87.3
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 7.8e-221 770.4 458 80.3
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 2.3e-220 768.8 414 87.2
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 5.1e-220 767.7 464 80.0
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 8.6e-220 766.9 428 84.6
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.1e-219 766.5 463 79.3
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 1.5e-219 766.1 462 79.0
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 7.3e-219 763.8 466 80.3
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 9.6e-219 763.5 424 84.4
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.2e-218 763.1 424 84.4
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.2e-218 763.1 424 84.4
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.6e-218 762.7 424 84.2
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 2.8e-218 761.9 464 78.7
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 6.2e-218 760.8 424 84.0
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 1.4e-217 759.6 453 79.9
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.8e-217 759.2 424 84.0
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 8.9e-217 756.9 413 85.2
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 1.6e-213 746.1 424 82.1
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 2.7e-213 745.3 480 79.0
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 2.7e-213 745.3 422 82.0
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 4.6e-213 744.6 424 84.2
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 2.3e-212 742.3 475 74.7
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 6.9e-209 730.7 424 80.0
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 7.6e-208 727.2 401 85.0
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 1.7e-207 726.1 486 74.1
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.2e-207 725.7 420 80.0
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 4.9e-207 724.5 401 85.0
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 1.1e-206 723.4 431 78.0
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 6.0e-205 717.6 421 78.1
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 3.0e-204 715.3 419 79.0
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 3.9e-204 714.9 422 79.9
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 1.5e-203 713.0 417 80.1
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 1.1e-201 706.8 441 78.5
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.4e-201 706.4 472 75.4
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 3.0e-196 688.7 392 86.0
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 9.6e-195 683.7 382 84.8
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.1e-193 678.7 421 76.2
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.0e-191 673.7 454 72.7
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 8.7e-188 660.6 396 79.5
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.5e-187 659.8 387 81.7
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 4.3e-187 658.3 420 72.4
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 4.2e-182 641.7 356 85.1
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 9.3e-182 640.6 423 72.3
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.4e-172 610.1 430 70.7
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 4.4e-171 605.1 420 66.4
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 1.1e-169 600.5 377 78.2
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 3.4e-168 595.5 423 66.4
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 1.8e-156 556.6 486 61.7
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 2.1e-141 506.5 276 85.9
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 4.7e-141 505.4 270 89.3
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 6.1e-141 505.0 271 87.8
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 4.4e-139 498.8 373 63.5
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 5.7e-131 471.9 433 56.4
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 1.1e-116 424.5 222 90.1
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 6.7e-63 245.7 147 76.2
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 2.5e-62 243.8 190 65.3
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 3.4e-59 233.4 147 72.8
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 8.8e-39 165.6 87 82.8
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 3.1e-28 130.6 79 74.7
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 2.3e-26 124.4 79 74.7
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 3.7e-21 107.1 57 86.0
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 3.6e-16 90.5 49 87.8
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.0e-10 72.4 49 67.3
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.0e-10 72.4 46 71.7
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.6e-10 69.7 42 71.4
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 6.2e-08 63.2 40 77.5


User provided reference genes

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