Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 0.0e+00 1271.9 636 100.0
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 0.0e+00 1158.3 643 90.8
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 3.9e-295 1017.7 631 78.4
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 2.4e-292 1008.4 634 77.9
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 2.6e-291 1005.0 636 77.2
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 7.6e-291 1003.4 636 76.7
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 4.9e-290 1000.7 634 77.8
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 1.1e-289 999.6 613 79.4
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 3.5e-288 994.6 634 77.9
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 1.3e-285 986.1 680 72.9
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 1.6e-285 985.7 636 76.4
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 2.1e-285 985.3 636 75.5
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.1e-284 983.0 636 75.5
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 3.1e-284 981.5 636 75.5
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 1.6e-280 969.1 637 75.0
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 3.0e-279 964.9 615 76.7
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 5.1e-279 964.1 636 74.4
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 8.2e-277 956.8 636 72.6
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 1.4e-276 956.1 636 73.9
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 5.3e-276 954.1 639 74.8
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 7.7e-275 950.3 636 73.6
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 8.5e-274 946.8 636 73.6
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 3.2e-273 944.9 636 74.2
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 9.4e-273 943.3 636 73.3
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 2.7e-272 941.8 636 73.6
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.8e-271 939.1 636 73.7
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 1.8e-271 939.1 636 72.3
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 2.0e-270 935.6 636 71.9
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 4.3e-270 934.5 636 73.0
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 4.3e-270 934.5 631 73.4
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 4.3e-270 934.5 632 72.3
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 5.7e-270 934.1 631 72.3
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.3e-269 932.9 636 73.6
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.4e-268 929.5 636 73.0
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 1.4e-268 929.5 629 72.8
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 2.4e-268 928.7 637 71.6
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 1.2e-267 926.4 636 72.2
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 5.9e-267 924.1 636 70.8
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 2.2e-266 922.2 639 71.8
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 5.0e-266 921.0 631 71.8
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 8.5e-266 920.2 631 72.1
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 4.2e-265 917.9 631 71.6
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 7.2e-265 917.1 631 70.5
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 7.2e-265 917.1 636 70.8
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 3.6e-264 914.8 631 71.2
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 1.0e-263 913.3 639 70.1
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.3e-263 912.1 631 70.0
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 2.0e-262 909.1 631 70.0
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 3.3e-262 908.3 631 69.9
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 7.4e-262 907.1 578 76.3
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 7.4e-262 907.1 630 71.6
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 2.4e-260 902.1 662 69.0
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 1.2e-259 899.8 641 71.1
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.7e-258 896.0 601 73.5
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 2.2e-258 895.6 612 71.1
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 3.8e-258 894.8 614 72.1
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 2.5e-257 892.1 636 67.6
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 4.2e-257 891.3 612 71.9
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 3.7e-253 878.2 630 69.4
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 1.8e-252 875.9 635 69.0
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 7.0e-252 874.0 669 66.8
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 1.2e-251 873.2 639 67.3
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 2.9e-250 868.6 632 67.7
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 2.9e-250 868.6 632 65.0
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 5.0e-250 867.8 631 68.6
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 8.5e-250 867.1 630 67.3
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 5.5e-249 864.4 613 70.0
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 5.5e-249 864.4 633 67.1
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 9.4e-249 863.6 634 68.8
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 6.1e-248 860.9 632 64.7
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.4e-247 859.8 631 68.9
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 1.2e-246 856.7 640 67.3
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 7.0e-244 847.4 590 70.5
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 3.5e-243 845.1 627 67.5
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 2.5e-241 839.0 638 65.8
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 7.2e-241 837.4 635 65.8
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 2.7e-240 835.5 577 69.8
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 1.5e-238 829.7 636 64.9
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 1.7e-237 826.2 637 65.0
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 4.9e-237 824.7 637 65.1
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 1.3e-234 816.6 632 64.1
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 2.3e-234 815.8 638 64.3
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 2.3e-234 815.8 638 64.3
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 5.0e-234 814.7 630 64.8
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 8.6e-234 813.9 631 65.9
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 8.0e-232 807.4 595 66.6
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 1.3e-229 800.0 566 69.3
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 2.1e-224 782.7 637 62.0
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 7.1e-212 741.1 606 60.2
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 2.3e-210 736.1 630 58.7
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 2.1e-203 713.0 450 77.8
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 9.6e-193 677.6 490 69.4
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 3.3e-185 652.5 636 52.0
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 8.1e-184 647.9 495 64.6
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 3.8e-181 639.0 416 74.3
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 9.3e-180 634.4 449 69.0
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 1.4e-172 610.5 646 49.5
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 3.3e-169 599.4 403 74.2
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 9.7e-161 571.2 418 68.7
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 5.7e-153 545.4 610 47.9
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.1e-148 531.2 399 65.7
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.5e-145 520.8 634 45.0
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 5.5e-132 475.7 441 60.3
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 1.6e-126 457.6 612 44.6
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 1.4e-106 391.3 778 33.3
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 2.1e-94 350.9 279 65.6
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 1.1e-47 195.7 186 55.9
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 2.5e-47 194.5 163 61.3
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 7.4e-44 183.0 214 47.7
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 5.0e-40 170.2 177 52.0
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 6.5e-40 169.9 152 55.3
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 2.0e-33 148.3 82 84.1
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 2.3e-21 108.2 87 66.7
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 3.1e-18 97.8 81 63.0
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 8.5e-16 89.7 98 49.0
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 3.7e-11 74.3 39 84.6
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 5.5e-07 60.5 37 75.7
COL.COLO4_22600 Corchorus olitorius HOM05D002762 ORTHO05D155964 4.7e-06 57.4 54 53.7


User provided reference genes

Program Settings