Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 5.6e-217 757.3 373 100.0
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 4.7e-208 727.6 373 95.7
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 4.0e-199 698.0 370 91.4
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 2.2e-197 692.2 370 90.8
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 7.1e-196 687.2 370 90.3
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.0e-194 683.3 370 90.3
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 6.6e-194 680.6 370 89.7
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 1.6e-192 676.0 370 88.1
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.6e-192 676.0 370 88.1
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 1.6e-192 676.0 371 88.9
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 3.6e-192 674.9 370 88.1
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 3.6e-192 674.9 370 88.4
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 6.2e-192 674.1 370 88.4
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.4e-191 672.9 370 87.6
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 1.4e-191 672.9 370 88.4
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.8e-191 672.5 371 88.4
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.8e-191 672.5 371 88.4
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 5.3e-191 671.0 370 87.6
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 2.0e-190 669.1 377 87.0
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 4.5e-190 667.9 370 87.6
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 1.7e-189 666.0 370 87.0
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 1.7e-189 666.0 371 86.8
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 2.2e-189 665.6 370 86.8
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 3.8e-189 664.8 371 88.4
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.1e-188 663.3 370 86.5
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 1.4e-188 662.9 372 87.1
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 2.4e-188 662.1 370 86.2
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 4.2e-188 661.4 370 86.2
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 4.2e-188 661.4 370 86.2
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 1.2e-187 659.8 370 85.9
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 2.1e-187 659.1 371 86.0
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 2.7e-187 658.7 371 86.3
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 3.5e-187 658.3 370 87.0
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 4.6e-187 657.9 370 86.8
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 6.0e-187 657.5 370 85.4
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 6.0e-187 657.5 370 86.2
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 1.0e-186 656.8 371 85.7
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 3.0e-186 655.2 369 87.0
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 5.1e-186 654.4 361 88.1
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 8.7e-186 653.7 371 87.1
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 1.9e-185 652.5 371 86.8
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.9e-185 652.5 371 86.0
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 1.9e-185 652.5 371 86.0
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 3.3e-185 651.7 371 86.8
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 4.3e-185 651.4 371 85.7
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 9.6e-185 650.2 370 86.2
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 3.6e-184 648.3 370 84.6
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 1.1e-183 646.7 386 82.9
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.8e-183 646.0 372 86.0
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 2.4e-183 645.6 368 85.3
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 3.1e-183 645.2 372 85.5
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 5.3e-183 644.4 366 85.5
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 6.9e-183 644.0 371 84.4
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.2e-182 643.3 371 85.2
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.5e-182 642.9 409 78.0
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 1.5e-182 642.9 371 84.4
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 5.8e-182 641.0 371 84.1
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 5.8e-182 641.0 370 83.8
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 1.3e-181 639.8 371 85.2
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 1.7e-181 639.4 370 84.1
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 2.2e-181 639.0 370 83.5
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 2.9e-181 638.6 370 83.5
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 3.8e-181 638.3 371 83.3
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 4.9e-181 637.9 370 83.5
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 6.4e-181 637.5 358 87.4
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 8.4e-181 637.1 373 83.4
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 2.4e-180 635.6 373 83.4
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 2.4e-180 635.6 370 83.5
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 4.2e-180 634.8 373 83.1
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 5.5e-180 634.4 402 79.9
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 7.1e-180 634.0 370 84.3
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 7.1e-180 634.0 370 83.8
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 9.3e-180 633.6 370 83.2
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 1.2e-179 633.3 366 83.9
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 1.6e-179 632.9 371 81.9
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 2.1e-179 632.5 360 84.7
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 2.1e-179 632.5 360 84.7
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 2.1e-179 632.5 360 84.7
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 2.1e-179 632.5 360 84.7
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 2.1e-179 632.5 360 84.7
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 2.7e-179 632.1 365 83.3
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 3.5e-179 631.7 359 85.2
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 6.0e-179 630.9 373 83.6
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 7.9e-179 630.6 366 83.1
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 1.0e-178 630.2 370 82.4
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 1.3e-178 629.8 370 82.4
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 1.3e-178 629.8 360 84.4
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.9e-178 628.2 384 81.2
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 8.7e-178 627.1 350 87.4
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 8.7e-178 627.1 373 83.1
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 2.5e-177 625.5 370 83.5
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 2.5e-177 625.5 397 78.3
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 4.3e-177 624.8 374 81.8
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 4.3e-177 624.8 366 83.6
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 1.3e-176 623.2 356 84.6
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.6e-176 622.9 371 81.9
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 2.8e-176 622.1 369 80.5
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 3.7e-176 621.7 373 82.3
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 3.1e-175 618.6 367 81.5
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 6.9e-175 617.5 370 81.6
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 1.2e-174 616.7 370 78.6
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 7.6e-174 614.0 370 80.0
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.0e-173 613.6 371 81.7
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 1.4e-172 609.8 351 84.3
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 1.2e-171 606.7 370 79.2
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 1.8e-170 602.8 371 79.8
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 1.1e-169 600.1 372 81.2
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.1e-168 595.9 370 81.6
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 2.8e-168 595.5 370 79.5
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 2.8e-168 595.5 370 79.2
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 3.7e-168 595.1 375 79.2
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 2.4e-167 592.4 371 79.0
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 2.4e-167 592.4 351 82.3
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 2.4e-167 592.4 433 71.1
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 1.5e-166 589.7 365 79.7
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 2.6e-166 589.0 369 79.1
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 7.6e-166 587.4 368 79.6
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 1.0e-165 587.0 360 79.2
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 3.8e-165 585.1 368 80.2
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 3.8e-165 585.1 370 78.6
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 4.2e-164 581.6 370 76.2
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 9.3e-164 580.5 371 77.9
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 2.1e-163 579.3 368 75.0
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 3.0e-162 575.5 368 74.7
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 3.9e-162 575.1 371 76.0
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 6.7e-162 574.3 353 80.2
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 8.7e-162 573.9 371 76.0
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 1.5e-161 573.2 360 79.2
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 2.4e-159 565.8 351 80.1
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 2.4e-159 565.8 366 76.5
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 2.0e-158 562.8 366 75.4
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 4.5e-158 561.6 366 74.9
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 7.7e-158 560.8 371 74.9
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.3e-157 560.1 368 74.5
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 6.1e-155 551.2 362 74.6
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 1.4e-154 550.1 373 75.9
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 2.6e-153 545.8 397 72.0
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 3.2e-148 528.9 370 68.1
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 3.6e-147 525.4 370 67.8
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 7.9e-147 524.2 370 67.0
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 7.9e-147 524.2 376 66.8
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 3.3e-145 518.8 372 65.9
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 6.3e-144 514.6 362 69.1
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 6.5e-141 504.6 357 70.9
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 1.1e-140 503.8 370 66.5
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 1.8e-138 496.5 325 75.1
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 3.0e-138 495.7 371 65.8
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 2.4e-135 486.1 288 81.9
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.2e-134 483.8 357 71.1
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 2.7e-134 482.6 283 81.6
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 3.5e-134 482.3 280 84.3
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 5.9e-134 481.5 277 84.8
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 6.5e-133 478.0 281 84.3
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 6.5e-133 478.0 279 83.9
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 5.5e-132 474.9 363 64.2
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 9.4e-132 474.2 358 65.9
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 1.4e-127 460.3 278 81.7
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 1.8e-127 459.9 327 70.9
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 2.6e-121 439.5 387 56.6
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 2.4e-119 433.0 366 56.8
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 1.6e-118 430.3 275 78.5
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 3.8e-117 425.6 239 85.4
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 5.2e-114 415.2 393 55.0
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 8.9e-114 414.5 275 73.8
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 2.9e-112 409.5 275 72.0
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 2.1e-107 393.3 369 53.1
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 4.9e-96 355.5 198 86.4
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 1.2e-89 334.3 273 64.8
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 1.3e-88 330.9 222 74.3
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.1e-87 327.8 197 79.7
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 8.7e-85 318.2 177 87.0
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 5.6e-76 288.9 171 85.4
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 2.2e-56 223.8 268 51.5
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 9.7e-52 208.4 378 33.1
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 2.3e-45 187.2 442 29.0
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 2.8e-43 180.3 113 81.4
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 4.1e-42 176.4 119 70.6
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 1.2e-41 174.9 147 62.6
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 1.0e-40 171.8 403 27.0
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 1.0e-40 171.8 119 68.9
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 1.7e-35 154.5 297 31.0
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 5.0e-32 142.9 115 60.0
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 2.3e-29 134.0 84 75.0
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 6.6e-08 62.8 49 67.3
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 8.6e-08 62.4 67 52.2


User provided reference genes

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