Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.7e-140 502.7 256 100.0
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 3.8e-124 448.4 256 89.1
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 7.4e-120 434.1 255 85.9
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 3.7e-95 352.1 253 71.1
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 4.2e-91 338.6 253 68.4
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 1.8e-89 333.2 251 70.1
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 2.6e-88 329.3 236 69.9
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 2.8e-87 325.9 235 70.2
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 6.3e-87 324.7 241 70.1
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 1.1e-86 323.9 234 72.6
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 4.1e-86 322.0 236 72.0
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 4.1e-86 322.0 236 72.0
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 5.4e-86 321.6 176 86.4
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.2e-85 320.5 237 69.2
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 2.7e-85 319.3 241 67.2
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 4.5e-85 318.5 239 68.6
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 1.0e-84 317.4 256 65.2
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.0e-84 317.4 174 86.8
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 1.3e-84 317.0 248 66.1
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 2.9e-84 315.8 233 70.4
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 2.9e-84 315.8 235 69.4
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 2.9e-84 315.8 249 66.3
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 5.0e-84 315.1 172 89.0
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 2.5e-83 312.8 164 89.6
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 2.5e-83 312.8 179 84.9
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 9.5e-83 310.8 239 68.6
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 9.5e-83 310.8 179 84.4
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 1.2e-82 310.5 236 69.1
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 1.6e-82 310.1 173 83.2
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 2.1e-82 309.7 179 84.4
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 2.1e-82 309.7 235 70.2
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 2.8e-82 309.3 177 82.5
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 2.8e-82 309.3 284 61.3
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 2.8e-82 309.3 165 87.9
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 3.6e-82 308.9 247 64.4
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 3.6e-82 308.9 252 66.3
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 4.7e-82 308.5 231 66.7
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 6.1e-82 308.1 237 67.1
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 8.0e-82 307.8 236 69.1
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 1.8e-81 306.6 246 66.3
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 4.0e-81 305.4 236 66.9
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 5.2e-81 305.1 174 82.2
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 5.2e-81 305.1 237 66.7
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 3.4e-80 302.4 168 85.1
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 5.8e-80 301.6 238 63.9
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 5.8e-80 301.6 199 74.4
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 1.3e-79 300.4 185 78.4
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 1.3e-79 300.4 185 78.4
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 2.9e-79 299.3 214 69.2
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 3.7e-79 298.9 236 66.5
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 8.3e-79 297.7 250 64.0
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 1.1e-78 297.4 177 78.5
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 3.2e-78 295.8 174 80.5
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 5.4e-78 295.0 247 65.2
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.0e-77 293.1 174 79.9
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 1.3e-76 290.4 189 74.1
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 1.7e-76 290.0 229 65.9
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 2.3e-76 289.7 240 64.6
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 2.3e-76 289.7 176 77.3
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 3.9e-76 288.9 172 77.9
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 5.0e-76 288.5 164 79.3
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 8.6e-76 287.7 238 63.9
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 8.6e-76 287.7 193 75.6
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 1.9e-75 286.6 241 64.7
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 1.9e-75 286.6 241 64.7
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 1.9e-75 286.6 241 64.7
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 1.9e-75 286.6 246 60.6
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 7.3e-75 284.6 194 72.7
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 9.5e-75 284.3 239 62.3
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.6e-74 283.5 179 77.7
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.6e-74 283.5 164 80.5
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 2.8e-74 282.7 236 60.6
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 6.2e-74 281.6 252 59.9
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 6.2e-74 281.6 188 71.3
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 1.8e-73 280.0 171 78.4
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 3.1e-73 279.3 184 74.5
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 4.0e-73 278.9 170 76.5
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 4.0e-73 278.9 220 65.0
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 6.8e-73 278.1 242 63.2
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 6.8e-73 278.1 174 77.6
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 8.9e-73 277.7 244 59.8
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 8.9e-73 277.7 164 77.4
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 8.9e-73 277.7 179 77.1
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 2.0e-72 276.6 165 78.2
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 3.4e-72 275.8 242 61.6
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 4.4e-72 275.4 248 61.7
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 5.4e-70 268.5 172 76.2
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 3.9e-68 262.3 155 80.0
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 7.3e-67 258.1 282 53.2
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 6.8e-65 251.5 178 67.4
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 8.9e-65 251.1 192 66.7
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 1.1e-62 244.2 176 67.0
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 1.9e-62 243.4 168 66.7
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 1.2e-61 240.7 175 65.1
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 7.8e-61 238.0 192 64.6
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 1.0e-60 237.7 173 66.5
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 1.6e-58 230.3 212 59.0
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 4.4e-56 222.2 129 82.2
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 1.0e-52 211.1 231 54.1
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 2.3e-52 209.9 131 73.3
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 1.1e-51 207.6 209 54.5
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 4.7e-50 202.2 126 73.0
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 3.8e-47 192.6 109 79.8
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 4.2e-46 189.1 116 75.0
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 2.7e-45 186.4 113 77.0
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 6.6e-44 181.8 113 73.5
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 1.5e-43 180.6 113 73.5
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 3.1e-41 172.9 111 78.4
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 9.0e-41 171.4 109 71.6
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 2.0e-40 170.2 188 47.9
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 5.8e-40 168.7 178 49.4
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.1e-38 164.5 180 51.7
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 1.4e-38 164.1 153 61.4
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 3.5e-21 106.3 163 36.2
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 4.3e-19 99.4 132 53.0
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 2.6e-16 90.1 57 77.2
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 4.5e-16 89.4 195 30.8
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 6.1e-13 79.0 200 28.5
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 1.8e-12 77.4 182 27.5
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 9.7e-11 71.6 49 69.4
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 3.8e-07 59.7 60 55.0


User provided reference genes

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