Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 3.4e-152 541.6 265 100.0
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 1.4e-129 466.5 265 87.9
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 6.1e-117 424.5 266 80.1
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 8.8e-108 394.0 266 75.9
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 1.8e-105 386.3 265 74.7
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 4.5e-104 381.7 267 74.9
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 7.2e-102 374.4 269 73.2
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 2.7e-101 372.5 262 73.7
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 8.8e-100 367.5 269 72.1
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 3.4e-99 365.5 269 72.1
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 7.5e-99 364.4 276 71.0
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 7.5e-99 364.4 266 72.2
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 9.8e-99 364.0 269 72.1
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 9.8e-99 364.0 264 72.3
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.7e-98 363.2 266 71.4
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 1.7e-98 363.2 267 72.3
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 2.8e-98 362.5 266 71.1
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 4.8e-98 361.7 211 82.0
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 8.3e-98 360.9 266 71.1
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 8.3e-98 360.9 266 72.2
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 1.4e-97 360.1 268 67.5
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 1.4e-97 360.1 288 68.8
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 7.0e-97 357.8 264 71.2
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 9.1e-97 357.5 265 70.9
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 1.2e-96 357.1 217 82.0
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 1.2e-96 357.1 267 72.7
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 2.7e-96 355.9 265 69.4
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 4.5e-96 355.1 265 69.4
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 1.3e-95 353.6 277 66.8
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 1.7e-95 353.2 268 68.7
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 3.8e-95 352.1 265 66.0
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 6.6e-95 351.3 264 69.7
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 1.9e-94 349.7 262 68.7
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 3.3e-94 349.0 265 68.7
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 1.2e-93 347.1 275 65.8
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 3.6e-93 345.5 250 70.8
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 1.0e-92 344.0 270 69.3
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 6.8e-92 341.3 259 66.0
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 6.8e-92 341.3 261 68.6
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 6.8e-92 341.3 261 68.6
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 8.9e-92 340.9 267 70.0
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 2.6e-91 339.3 260 68.8
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 4.4e-91 338.6 259 66.4
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 4.4e-91 338.6 220 74.5
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 9.8e-91 337.4 259 66.8
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 1.3e-90 337.0 273 67.8
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 1.7e-90 336.7 264 68.2
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.8e-90 335.9 208 78.8
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.8e-90 335.9 208 78.8
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 2.8e-90 335.9 255 68.2
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 8.3e-90 334.3 259 70.3
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.1e-89 334.0 260 68.1
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 2.4e-89 332.8 256 68.0
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 2.7e-88 329.3 241 69.7
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 3.5e-88 328.9 266 66.2
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 5.9e-88 328.2 255 67.1
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 5.9e-88 328.2 245 69.4
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 1.0e-87 327.4 261 66.7
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 1.7e-87 326.6 261 66.7
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 5.0e-87 325.1 263 67.3
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 8.6e-87 324.3 193 80.3
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 8.6e-87 324.3 244 68.4
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 1.9e-86 323.2 242 68.6
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 2.5e-86 322.8 263 66.2
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 4.3e-86 322.0 263 66.2
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 5.6e-86 321.6 268 67.2
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 7.3e-86 321.2 260 66.2
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 6.1e-85 318.2 208 77.4
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 8.9e-84 314.3 265 63.8
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 1.2e-83 313.9 205 75.6
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 5.8e-83 311.6 223 70.0
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 1.7e-82 310.1 344 53.5
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 4.1e-81 305.4 263 63.1
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 7.0e-81 304.7 216 70.4
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 2.0e-80 303.1 176 83.0
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 1.3e-79 300.4 205 71.2
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 4.3e-78 295.4 259 62.9
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 7.3e-78 294.7 242 65.7
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 9.5e-78 294.3 176 79.5
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 2.1e-77 293.1 208 67.8
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 6.2e-77 291.6 291 57.4
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 2.3e-76 289.7 255 61.2
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 2.2e-74 283.1 197 71.1
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 1.2e-72 277.3 263 59.7
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 2.3e-71 273.1 205 67.8
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 1.7e-66 256.9 161 74.5
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 4.6e-64 248.8 192 66.7
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 1.0e-63 247.7 215 58.1
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 5.6e-62 241.9 241 55.6
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 1.2e-59 234.2 205 62.4
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 2.0e-59 233.4 223 57.4
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 2.6e-59 233.0 210 55.2
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 2.2e-58 229.9 159 67.9
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 4.2e-57 225.7 157 66.2
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 1.3e-55 220.7 162 64.8
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 6.6e-55 218.4 255 53.3
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 8.7e-55 218.0 167 61.1
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 2.5e-54 216.5 135 75.6
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.2e-51 207.6 172 65.7
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.4e-49 200.7 156 66.7
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 4.2e-49 199.1 208 55.8
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 2.7e-48 196.4 161 63.4
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 5.6e-46 188.7 112 83.9
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 5.6e-46 188.7 217 54.4
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 4.8e-45 185.7 110 80.0
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 4.0e-44 182.6 114 78.1
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 2.9e-42 176.4 204 50.0
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 3.8e-42 176.0 194 50.0
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 4.2e-41 172.6 114 74.6
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 5.1e-39 165.6 137 67.2
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 8.7e-39 164.9 108 75.9
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 8.7e-39 164.9 108 75.9
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 1.1e-38 164.5 107 77.6
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 6.9e-36 155.2 81 85.2
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 4.5e-35 152.5 82 84.1
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 7.6e-35 151.8 94 76.6
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.3e-34 151.0 94 77.7
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 7.6e-27 125.2 167 47.3
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.3e-21 107.8 61 80.3
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 4.5e-19 99.4 183 37.2
Cc02_g27540 Coffea canephora HOM05D006647 ORTHO05D153686 2.3e-07 60.5 89 43.8


User provided reference genes

Program Settings