Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 1.4e-142 509.6 255 100.0
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 1.3e-135 486.5 255 95.3
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 1.1e-118 430.3 253 86.2
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 7.7e-117 424.1 255 83.5
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.4e-115 419.9 253 82.2
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 4.6e-114 414.8 259 79.9
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 6.1e-114 414.5 255 81.6
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 6.1e-114 414.5 255 80.0
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 7.9e-114 414.1 255 81.6
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 1.8e-113 412.9 255 81.2
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 1.1e-110 403.7 253 79.8
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 4.1e-110 401.7 255 80.4
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 5.3e-110 401.4 255 80.4
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 2.6e-109 399.1 252 78.2
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 2.6e-109 399.1 253 80.6
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 2.6e-109 399.1 253 80.6
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 3.4e-109 398.7 255 78.4
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 5.9e-109 397.9 255 78.8
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 2.2e-108 396.0 255 80.0
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.2e-106 390.2 253 78.3
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 1.6e-106 389.8 257 77.8
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 1.0e-105 387.1 256 76.2
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 1.0e-105 387.1 254 78.3
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 1.8e-105 386.3 261 76.2
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 3.9e-105 385.2 256 77.7
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 3.9e-105 385.2 255 76.5
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 5.1e-105 384.8 256 74.6
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 1.5e-104 383.3 253 75.9
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 2.0e-104 382.9 253 76.7
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 2.6e-104 382.5 256 75.8
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 2.6e-104 382.5 256 75.8
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 3.3e-104 382.1 256 74.2
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 3.3e-104 382.1 256 74.6
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 3.3e-104 382.1 256 77.0
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 4.4e-104 381.7 255 75.7
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 9.7e-104 380.6 255 74.1
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 9.7e-104 380.6 256 74.2
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 1.3e-103 380.2 255 75.3
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 1.7e-103 379.8 256 74.2
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 4.8e-103 378.3 256 73.4
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 8.2e-103 377.5 253 75.5
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 1.1e-102 377.1 252 75.4
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 1.1e-102 377.1 254 73.2
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 1.1e-102 377.1 252 74.6
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 1.8e-102 376.3 252 75.4
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 2.4e-102 375.9 254 73.6
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 3.1e-102 375.6 256 74.6
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.2e-101 373.6 252 73.4
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 1.5e-101 373.2 252 75.0
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 1.5e-101 373.2 258 74.0
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 2.6e-101 372.5 252 72.6
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.6e-101 372.5 253 75.1
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 3.5e-101 372.1 253 73.9
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 3.5e-101 372.1 253 75.1
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 1.3e-100 370.2 252 75.0
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 5.0e-100 368.2 252 73.8
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 5.0e-100 368.2 252 73.8
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 8.5e-100 367.5 255 73.3
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 8.5e-100 367.5 273 71.4
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 3.2e-99 365.5 253 73.9
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 3.2e-99 365.5 253 73.1
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 4.2e-99 365.2 239 75.3
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 9.4e-99 364.0 258 72.5
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 1.2e-98 363.6 255 73.7
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 1.2e-98 363.6 253 71.5
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 3.6e-98 362.1 271 69.7
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 4.7e-98 361.7 252 73.8
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 6.1e-98 361.3 252 72.2
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 8.0e-98 360.9 254 72.0
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 3.0e-97 359.0 267 68.9
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 6.7e-97 357.8 251 71.3
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 6.7e-97 357.8 307 64.5
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 1.5e-96 356.7 252 69.4
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 2.0e-96 356.3 254 72.4
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 2.0e-96 356.3 252 69.8
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 2.0e-96 356.3 252 69.8
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 4.4e-96 355.1 252 71.8
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 5.7e-96 354.8 253 72.3
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 5.7e-96 354.8 257 70.4
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 5.7e-96 354.8 275 66.5
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 2.8e-95 352.4 263 68.8
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 2.8e-95 352.4 256 71.1
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 2.8e-95 352.4 251 70.1
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 3.7e-95 352.1 247 70.9
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 8.2e-95 350.9 254 70.1
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 1.8e-94 349.7 239 73.6
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 2.6e-93 345.9 239 73.6
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 1.7e-92 343.2 261 69.0
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 2.2e-92 342.8 261 68.2
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 2.9e-92 342.4 234 72.2
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 3.8e-92 342.0 238 73.1
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 8.5e-92 340.9 252 69.0
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 9.4e-91 337.4 256 65.2
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 1.2e-88 330.5 240 72.5
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 1.1e-86 323.9 252 63.5
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 1.4e-86 323.6 252 64.3
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 5.3e-86 321.6 254 66.5
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 2.1e-82 309.7 253 62.1
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 3.4e-80 302.4 200 75.5
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 3.4e-80 302.4 207 71.5
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 9.8e-80 300.8 255 62.7
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 4.8e-79 298.5 205 75.1
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 5.4e-78 295.0 255 60.4
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 1.2e-77 293.9 177 81.9
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 1.0e-76 290.8 257 61.5
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 6.6e-76 288.1 252 57.9
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 2.5e-75 286.2 257 58.4
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 6.1e-74 281.6 164 81.7
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 1.0e-73 280.8 236 64.4
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 8.6e-68 261.2 186 72.0
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 3.3e-67 259.2 244 57.0
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 5.6e-67 258.5 184 71.7
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 2.8e-66 256.1 208 63.5
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 1.4e-62 243.8 251 54.6
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 9.2e-62 241.1 256 55.1
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 2.0e-61 240.0 219 59.8
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 4.3e-59 232.3 254 50.8
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 3.6e-58 229.2 135 80.0
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 1.1e-54 217.6 220 53.6
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 1.5e-51 207.2 114 86.0
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 5.8e-48 195.3 141 73.0
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.4e-46 189.9 101 86.1
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 3.2e-46 189.5 141 71.6
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 8.9e-41 171.4 261 41.8
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 3.4e-40 169.5 148 59.5
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 3.0e-28 129.8 137 51.8
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 2.5e-27 126.7 67 83.6
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.3e-26 124.4 89 69.7
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 8.4e-23 111.7 57 84.2
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 8.7e-20 101.7 77 71.4
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 1.1e-19 101.3 72 65.3
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 7.4e-19 98.6 77 70.1
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 8.1e-18 95.1 75 70.7
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.4e-17 94.4 77 66.2
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 1.0e-15 88.2 73 60.3
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 1.8e-09 67.4 43 72.1
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 1.8e-09 67.4 58 63.8
PRCOL_00006457 Prasinoderma coloniale HOM05D005643 ORTHO05D006819 4.1e-09 66.2 143 37.1
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 4.1e-09 66.2 67 56.7
MBI07_g43742_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 4.2e-06 56.2 73 53.4


User provided reference genes

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