Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G004000 Populus trichocarpa HOM05D003918 ORTHO05D004494 2.9e-44 181.4 85 100.0
Sabra09G0001700 Salix brachista HOM05D003918 ORTHO05D004494 2.1e-42 175.3 85 95.3
PGR119G0927 Punica granatum HOM05D003918 ORTHO05D004494 1.3e-41 172.6 89 92.1
CiPaw.13G144800 Carya illinoinensis HOM05D003918 ORTHO05D004494 2.3e-41 171.8 89 92.1
FvH4_3g30520 Fragaria vesca HOM05D003918 ORTHO05D004494 2.3e-41 171.8 86 94.2
FAN11G2739 Fragaria x ananassa HOM05D003918 ORTHO05D004494 2.3e-41 171.8 86 94.2
FAN21G0274 Fragaria x ananassa HOM05D003918 ORTHO05D004494 2.3e-41 171.8 86 94.2
Hma1.2p1_0051F.1_g029570 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 2.3e-41 171.8 89 92.1
QL01p014884 Quercus lobata HOM05D003918 ORTHO05D004494 2.3e-41 171.8 80 97.5
AL4G22250 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 3.0e-41 171.4 80 97.5
Lj1A213T32 Lonicera japonica HOM05D003918 ORTHO05D004494 3.0e-41 171.4 80 97.5
AT2G27960 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 3.9e-41 171.0 80 96.2
HPP92_026243 Vanilla planifolia HOM05D003918 ORTHO05D004494 3.9e-41 171.0 83 94.0
Haze_23526 Corylus avellana HOM05D001217 ORTHO05D001097 5.1e-41 170.6 86 94.2
Rhsim01G0210200 Rhododendron simsii HOM05D003918 ORTHO05D004494 5.1e-41 170.6 81 96.3
RcHm_v2.0_Chr5g0056481 Rosa chinensis HOM05D003918 ORTHO05D004494 5.1e-41 170.6 86 93.0
Sp4g10790 Schrenkiella parvula HOM05D003918 ORTHO05D004494 5.1e-41 170.6 88 93.2
Aa31LG5G8120 Aethionema arabicum HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
CSS0025262 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
CSS0028017 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
Cc01_g10200 Coffea canephora HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
COL.COLO4_19215 Corchorus olitorius HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
Haze_03482 Corylus avellana HOM05D003918 ORTHO05D004494 6.6e-41 170.2 82 93.9
Glyma.11G192100 Glycine max HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
Glyma.12G082300 Glycine max HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
Gohir.A05G085800 Gossypium hirsutum HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
Gohir.D05G087700 Gossypium hirsutum HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
Gorai.009G089700 Gossypium raimondii HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
Lj3g0024072 Lotus japonicus HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
Phvul.011G086900 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
Sc21g0004230 Simmondsia chinensis HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
Thecc.09G297000 Theobroma cacao HOM05D003918 ORTHO05D004494 6.6e-41 170.2 80 96.2
Aqoxy1G01058 Aquilegia oxysepala HOM05D003918 ORTHO05D004494 1.1e-40 169.5 88 89.8
ClCG01G013880 Citrullus lanatus HOM05D003918 ORTHO05D004494 1.1e-40 169.5 80 96.2
Sc21g0004490 Simmondsia chinensis HOM05D003918 ORTHO05D004494 1.1e-40 169.5 89 89.9
Ca_10762_v3 Cicer arietinum L. HOM05D003918 ORTHO05D004494 1.5e-40 169.1 80 95.0
Eucgr.J00392 Eucalyptus grandis HOM05D003918 ORTHO05D004494 1.5e-40 169.1 80 95.0
Manes.04G012300 Manihot esculenta HOM05D003918 ORTHO05D004494 1.5e-40 169.1 80 95.0
Manes.11G152900 Manihot esculenta HOM05D003918 ORTHO05D004494 1.5e-40 169.1 80 95.0
Medtr4g057040 Medicago truncatula HOM05D003918 ORTHO05D004494 1.5e-40 169.1 80 95.0
Nn2g13876 Nelumbo nucifera HOM05D003918 ORTHO05D004494 1.5e-40 169.1 81 95.1
Nitab4.5_0000173g0230 Nicotiana tabacum HOM05D003918 ORTHO05D004494 1.5e-40 169.1 80 95.0
Sopen11g026220 Solanum pennellii HOM05D003918 ORTHO05D004494 1.5e-40 169.1 80 95.0
PGSC0003DMG402000458 Solanum tuberosum HOM05D003918 ORTHO05D004494 1.5e-40 169.1 80 95.0
CARHR120670 Cardamine hirsuta HOM05D003918 ORTHO05D004494 1.9e-40 168.7 80 95.0
HanXRQChr11g0346091 Helianthus annuus HOM05D003918 ORTHO05D004494 1.9e-40 168.7 83 92.8
Oeu008363.1 Olea europaea HOM05D003918 ORTHO05D004494 1.9e-40 168.7 80 95.0
SalBow6G1569 Salvia bowleyana HOM05D003918 ORTHO05D004494 1.9e-40 168.7 80 96.2
TAR633G2652 Trochodendron aralioides HOM05D003918 ORTHO05D004494 1.9e-40 168.7 80 95.0
Carub.0004s0872 Capsella rubella HOM05D003918 ORTHO05D004494 2.5e-40 168.3 80 96.2
CiPaw.14G106800 Carya illinoinensis HOM05D003918 ORTHO05D004494 2.5e-40 168.3 80 95.0
CDE09G0194 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 2.5e-40 168.3 83 91.6
Dinv16240 Davidia involucrata HOM05D003918 ORTHO05D004494 2.5e-40 168.3 80 95.0
ECA248G3596 Erigeron canadensis HOM05D003918 ORTHO05D004494 2.5e-40 168.3 81 93.8
FAN25G0673 Fragaria x ananassa HOM05D003918 ORTHO05D004494 2.5e-40 168.3 86 93.0
Gohir.A07G105200 Gossypium hirsutum HOM05D003918 ORTHO05D004494 2.5e-40 168.3 80 95.0
Gohir.D07G109300 Gossypium hirsutum HOM05D003918 ORTHO05D004494 2.5e-40 168.3 80 95.0
Gorai.001G117400 Gossypium raimondii HOM05D003918 ORTHO05D004494 2.5e-40 168.3 80 95.0
TWI79G0503 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 2.5e-40 168.3 80 95.0
TWI79G0939 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 2.5e-40 168.3 80 95.0
Actinidia07191 Actinidia chinensis HOM05D001217 ORTHO05D004494 3.3e-40 167.9 80 95.0
CSS0003214 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 3.3e-40 167.9 80 95.0
CSS0049251 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 3.3e-40 167.9 80 95.0
CAN.G546.56 Capsicum annuum HOM05D003918 ORTHO05D004494 3.3e-40 167.9 80 93.8
AUR62041324 Chenopodium quinoa HOM05D003918 ORTHO05D004494 3.3e-40 167.9 88 89.8
Ciclev10029696m.g Citrus clementina HOM05D003918 ORTHO05D004494 3.3e-40 167.9 89 88.8
Duzib168G2331 Durio zibethinus HOM05D003918 ORTHO05D004494 3.3e-40 167.9 89 89.9
Thhalv10017487m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 3.3e-40 167.9 88 92.0
Hund00834 Selenicereus undatus HOM05D003918 ORTHO05D004494 3.3e-40 167.9 80 95.0
TWI31G0950 Tripterygium wilfordii HOM05D003918 ORTHO05D004494 3.3e-40 167.9 80 96.2
TAR623G0966 Trochodendron aralioides HOM05D003918 ORTHO05D004494 3.3e-40 167.9 80 96.2
BcaB03g11846 Brassica carinata HOM05D003918 ORTHO05D004494 5.6e-40 167.2 89 93.3
BcaC01g00919 Brassica carinata HOM05D003918 ORTHO05D004494 5.6e-40 167.2 88 90.9
CANSAT64G2716 Cannabis sativa HOM05D003918 ORTHO05D004494 5.6e-40 167.2 80 95.0
CAN.G246.3 Capsicum annuum HOM05D003918 ORTHO05D004494 5.6e-40 167.2 80 93.8
HanXRQChr01g0019451 Helianthus annuus HOM05D003918 ORTHO05D004494 5.6e-40 167.2 83 91.6
Lsat_1_v5_gn_1_64981 Lactuca sativa HOM05D003918 ORTHO05D004494 5.6e-40 167.2 83 91.6
Lalb_Chr01g0004631 Lupinus albus HOM05D003918 ORTHO05D004494 5.6e-40 167.2 80 95.0
Peaxi162Scf00983g00019 Petunia axillaris HOM05D003918 ORTHO05D004494 5.6e-40 167.2 80 93.8
Psat0ss2518g0280 Pisum sativum HOM05D003918 ORTHO05D004494 5.6e-40 167.2 80 93.8
Sed0005005 Sechium edule HOM05D003918 ORTHO05D004494 5.6e-40 167.2 79 94.9
vmacro03250 Vaccinium macrocarpon HOM05D003918 ORTHO05D004494 5.6e-40 167.2 80 93.8
GSVIVG01031454001 Vitis vinifera HOM05D003918 ORTHO05D004494 5.6e-40 167.2 80 95.0
Zm00001eb402980 Zea mays HOM05D003918 ORTHO05D004494 5.6e-40 167.2 88 89.8
Prupe.6G113800 Prunus persica HOM05D003918 ORTHO05D004494 7.3e-40 166.8 88 90.9
MELO3C026958.2 Cucumis melo HOM05D003918 ORTHO05D004494 9.6e-40 166.4 80 93.8
Sed0024739 Sechium edule HOM05D003918 ORTHO05D004494 9.6e-40 166.4 88 89.8
EL10Ac9g21015 Beta vulgaris HOM05D003918 ORTHO05D004494 1.3e-39 166.0 88 89.8
ClCG02G021690 Citrullus lanatus HOM05D003918 ORTHO05D004494 1.3e-39 166.0 79 94.9
CsaV3_1G014150 Cucumis sativus L. HOM05D003918 ORTHO05D004494 1.3e-39 166.0 89 88.8
Dinv29385 Davidia involucrata HOM05D003918 ORTHO05D004494 1.6e-39 165.6 80 93.8
THA.LOC104815736 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 1.6e-39 165.6 83 91.6
TAR369G0366 Trochodendron aralioides HOM05D003918 ORTHO05D004494 1.6e-39 165.6 89 87.6
FAN16G1510 Fragaria x ananassa HOM05D003918 ORTHO05D004494 2.1e-39 165.2 92 88.0
MD03G1128000 Malus domestica HOM05D003918 ORTHO05D004494 2.1e-39 165.2 89 88.8
MD11G1149400 Malus domestica HOM05D003918 ORTHO05D004494 2.1e-39 165.2 89 88.8
Oeu040442.1 Olea europaea HOM05D003918 ORTHO05D004494 2.1e-39 165.2 89 86.5
DCAR_018757 Daucus carota HOM05D003918 ORTHO05D004494 2.8e-39 164.9 78 94.9
ECA233G3711 Erigeron canadensis HOM05D003918 ORTHO05D004494 2.8e-39 164.9 80 92.5
Thhalv10017678m.g Eutrema salsugineum HOM05D003918 ORTHO05D004494 2.8e-39 164.9 86 89.5
Oeu007724.1 Olea europaea HOM05D003918 ORTHO05D004494 2.8e-39 164.9 80 93.8
unitig_899.g14962 Utricularia gibba HOM05D003918 ORTHO05D004494 2.8e-39 164.9 80 93.8
Carub.0004s0873 Capsella rubella HOM05D003918 ORTHO05D004494 3.6e-39 164.5 85 90.6
MBI17_g16530_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 3.6e-39 164.5 79 93.7
Oeu000602.1 Olea europaea HOM05D003918 ORTHO05D004494 3.6e-39 164.5 88 87.5
PSO801G0480 Papaver somniferum HOM05D003918 ORTHO05D004494 3.6e-39 164.5 80 91.2
AL4G22230 Arabidopsis lyrata HOM05D003918 ORTHO05D004494 4.8e-39 164.1 81 90.1
AT2G27970 Arabidopsis thaliana HOM05D003918 ORTHO05D004494 4.8e-39 164.1 81 90.1
Rhsim13G0101600 Rhododendron simsii HOM05D003918 ORTHO05D004494 4.8e-39 164.1 80 92.5
PGSC0003DMG400018822 Solanum tuberosum HOM05D003918 ORTHO05D004494 4.8e-39 164.1 80 93.8
BraA08t33664Z Brassica rapa HOM05D003918 ORTHO05D004494 6.2e-39 163.7 89 87.6
Lsat_1_v5_gn_6_43541 Lactuca sativa HOM05D003918 ORTHO05D004494 6.2e-39 163.7 80 92.5
A08p17020 Brassica napus HOM05D003918 ORTHO05D004494 8.1e-39 163.3 89 87.6
THA.LOC104826394 Tarenaya hassleriana HOM05D003918 ORTHO05D004494 8.1e-39 163.3 80 91.2
DCAR_015501 Daucus carota HOM05D003918 ORTHO05D004494 1.4e-38 162.5 78 94.9
PSO339G4781 Papaver somniferum HOM05D003918 ORTHO05D004494 1.4e-38 162.5 80 91.2
Ah.01g016010 Amaranthus hybridus HOM05D003918 ORTHO05D004494 1.8e-38 162.2 89 88.8
C03p85930 Brassica napus HOM05D003918 ORTHO05D004494 1.8e-38 162.2 91 85.7
Cpa.g.sc47.8 Carica papaya HOM05D003918 ORTHO05D004494 1.8e-38 162.2 80 91.2
Oeu007309.2 Olea europaea HOM05D003918 ORTHO05D004494 1.8e-38 162.2 80 91.2
Os03g0146300 Oryza sativa ssp. japonica HOM05D003918 ORTHO05D004494 2.4e-38 161.8 75 97.3
Potri.004G217500 Populus trichocarpa HOM05D003918 ORTHO05D004494 3.1e-38 161.4 85 90.6
CARHR120680 Cardamine hirsuta HOM05D003918 ORTHO05D004494 4.0e-38 161.0 81 88.9
Migut.D02301 Erythranthe guttata HOM05D003918 ORTHO05D004494 5.3e-38 160.6 80 91.2
PSO339G2710 Papaver somniferum HOM05D003918 ORTHO05D004494 6.9e-38 160.2 76 93.4
SEGI_17224 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 6.9e-38 160.2 78 92.3
Nitab4.5_0003880g0020 Nicotiana tabacum HOM05D003918 ORTHO05D004494 9.0e-38 159.8 78 92.3
Eucgr.B03920 Eucalyptus grandis HOM05D003918 ORTHO05D004494 3.4e-37 157.9 77 92.2
Lalb_Chr03g0027731 Lupinus albus HOM05D003918 ORTHO05D004494 3.4e-37 157.9 80 90.0
Lalb_Chr19g0136871 Lupinus albus HOM05D003918 ORTHO05D004494 4.5e-37 157.5 75 96.0
ATR0043G026 Amborella trichopoda HOM05D003918 ORTHO05D004494 7.6e-37 156.8 80 86.2
MELO3C004864.2 Cucumis melo HOM05D003918 ORTHO05D004494 7.6e-37 156.8 90 83.3
Hma1.2p1_0772F.1_g215980 Hydrangea macrophylla HOM05D003918 ORTHO05D004494 7.6e-37 156.8 96 79.2
PGR102G3373 Punica granatum HOM05D003918 ORTHO05D004494 7.6e-37 156.8 76 93.4
SEGI_19027 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 1.7e-36 155.6 78 87.2
Glyma.12G083700 Glycine max HOM05D003918 ORTHO05D004494 1.1e-35 152.9 81 90.1
BcaB06g28178 Brassica carinata HOM05D003918 ORTHO05D004494 1.4e-35 152.5 74 90.5
Zm00001eb003750 Zea mays HOM05D003918 ORTHO05D004494 1.9e-35 152.1 83 80.7
SalBow3G4245 Salvia bowleyana HOM05D003918 ORTHO05D004494 4.2e-35 151.0 77 89.6
SMO116G0276 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 4.2e-35 151.0 80 82.5
Pp3c14_11680 Physcomitrium patens HOM05D003918 ORTHO05D004494 5.4e-35 150.6 78 85.9
Pp3c2_6200 Physcomitrium patens HOM05D003918 ORTHO05D004494 5.4e-35 150.6 78 85.9
Mapoly0001s0011 Marchantia polymorpha HOM05D003918 ORTHO05D004494 7.1e-35 150.2 80 83.8
BcaC02g08219 Brassica carinata HOM05D003918 ORTHO05D004494 2.1e-34 148.7 74 87.8
A04p21230 Brassica napus HOM05D003918 ORTHO05D004494 2.1e-34 148.7 74 87.8
C04p57080 Brassica napus HOM05D003918 ORTHO05D004494 2.1e-34 148.7 74 87.8
BolC4t27242H Brassica oleracea HOM05D003918 ORTHO05D004494 2.1e-34 148.7 74 87.8
Phvul.011G088400 Phaseolus vulgaris HOM05D003918 ORTHO05D004494 4.6e-34 147.5 80 81.2
CDE02G4651 Ceratophyllum demersum HOM05D003918 ORTHO05D004494 1.3e-31 139.4 83 83.1
Cre03.g180350 Chlamydomonas reinhardtii HOM05D003918 ORTHO05D004494 3.7e-31 137.9 70 84.3
PRCOL_00005401 Prasinoderma coloniale HOM05D003918 ORTHO05D004494 4.8e-31 137.5 75 78.7
MCO11G605 Micromonas commoda HOM05D003918 ORTHO05D004494 4.5e-29 131.0 68 82.4
MBI16_g13165_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 9.9e-29 129.8 91 67.0
CsaV3_6G014430 Cucumis sativus L. HOM05D003918 ORTHO05D004494 3.8e-28 127.9 63 92.1
SMO367G0337 Selaginella moellendorffii HOM05D003918 ORTHO05D004494 6.4e-28 127.1 69 76.8
SEGI_02290 Sequoiadendron giganteum HOM05D003918 ORTHO05D004494 2.4e-27 125.2 63 88.9
Zm00001eb012500 Zea mays HOM05D003918 ORTHO05D004494 3.2e-27 124.8 63 90.5
CBR_g2791 Chara braunii HOM05D003918 ORTHO05D004494 3.5e-26 121.3 60 88.3
MBI11_g44590_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 4.3e-24 114.4 63 81.0
BcaB02g10127 Brassica carinata HOM05D003918 ORTHO05D004494 1.2e-21 106.3 77 63.6
Actinidia24153 Actinidia chinensis HOM05D003918 ORTHO05D004494 1.0e-20 103.2 55 87.3
TPR.G31695 Trifolium pratense HOM05D003918 ORTHO05D004494 2.2e-20 102.1 48 95.8
Actinidia03687 Actinidia chinensis HOM05D003918 ORTHO05D004494 2.5e-16 88.6 44 88.6
ATR0760G002 Amborella trichopoda HOM05D003918 ORTHO05D004494 4.3e-16 87.8 52 80.8
Thecc.08G095400 Theobroma cacao HOM05D003918 ORTHO05D004494 6.3e-15 84.0 58 69.0
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis HOM05D005424 ORTHO05D006726 9.0e-14 80.1 46 76.1
Nn2g10486 Nelumbo nucifera HOM05D003918 ORTHO05D004494 9.0e-14 80.1 38 89.5
Zm00001eb191010 Zea mays HOM05D003918 ORTHO05D004494 9.0e-14 80.1 87 50.6
CSS0021242 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 2.6e-13 78.6 67 61.2
Nn6g35195 Nelumbo nucifera HOM05D003918 ORTHO05D004494 3.4e-13 78.2 37 94.6
CSS0049200 Camellia sinensis var. sinensis HOM05D003918 ORTHO05D004494 5.9e-13 77.4 39 87.2
Migut.N02540 Erythranthe guttata HOM05D003918 ORTHO05D004494 5.9e-13 77.4 47 78.7
BcaC05g28675 Brassica carinata HOM05D003918 ORTHO05D004494 1.3e-12 76.3 39 79.5
BolC5t33525H Brassica oleracea HOM05D003918 ORTHO05D004494 1.3e-12 76.3 39 79.5
SGA_v2.0_scaffold50G18575 Striga asiatica HOM05D003918 ORTHO05D004494 1.3e-12 76.3 53 69.8
Ah.03g143830 Amaranthus hybridus HOM05D003918 ORTHO05D004494 9.4e-11 70.1 38 86.8
Gohir.A02G090001 Gossypium hirsutum HOM05D003918 ORTHO05D004494 6.1e-10 67.4 38 81.6
Nn1g02037 Nelumbo nucifera HOM05D003918 ORTHO05D004494 1.8e-09 65.9 51 58.8
Nn4g23314 Nelumbo nucifera HOM05D003918 ORTHO05D004494 8.8e-09 63.5 29 89.7
Ah.09g226860 Amaranthus hybridus HOM05D003918 ORTHO05D004494 1.3e-07 59.7 38 78.9
MBI10_g35299_MAGBIO Magnolia biondii HOM05D003918 ORTHO05D004494 5.3e-06 54.3 29 79.3


User provided reference genes

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