Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G170900 Populus trichocarpa HOM05D008048 ORTHO05D010199 4.6e-158 561.2 291 100.0
Sabra08G0130700 Salix brachista HOM05D008048 ORTHO05D010199 1.2e-150 536.6 291 94.8
Potri.010G067000 Populus trichocarpa HOM05D008048 ORTHO05D010199 1.2e-142 510.0 291 89.7
Sabra10G0040500 Salix brachista HOM05D008048 ORTHO05D010199 6.6e-141 504.2 291 89.3
Manes.15G044600 Manihot esculenta HOM05D008048 ORTHO05D010199 1.6e-110 403.3 291 71.8
Cfa014771 Carpinus fangiana HOM05D008048 ORTHO05D010199 2.1e-94 349.7 291 64.9
Haze_11446 Corylus avellana HOM05D008048 ORTHO05D010199 1.0e-93 347.4 291 64.6
COL.COLO4_15948 Corchorus olitorius HOM05D008048 ORTHO05D010199 1.2e-89 334.0 291 61.5
MELO3C023035.2 Cucumis melo HOM05D008048 ORTHO05D010199 1.0e-88 330.9 291 59.1
Sed0019169 Sechium edule HOM05D008048 ORTHO05D010199 1.0e-88 330.9 291 58.8
Prupe.1G046300 Prunus persica HOM05D008048 ORTHO05D010199 1.1e-87 327.4 291 61.5
Hma1.2p1_0385F.1_g141480 Hydrangea macrophylla HOM05D008048 ORTHO05D010199 1.2e-86 323.9 291 59.5
CsaV3_2G012520 Cucumis sativus L. HOM05D008048 ORTHO05D010199 3.6e-86 322.4 291 58.1
TAR362G0870 Trochodendron aralioides HOM05D008048 ORTHO05D010199 1.0e-85 320.9 291 57.0
QL06p020732 Quercus lobata HOM05D008048 ORTHO05D010199 1.8e-85 320.1 290 57.6
Duzib151G0082 Durio zibethinus HOM05D008048 ORTHO05D010199 1.5e-84 317.0 291 61.2
MD13G1219500 Malus domestica HOM05D008048 ORTHO05D010199 1.7e-83 313.5 291 58.4
Nn1g02915 Nelumbo nucifera HOM05D008048 ORTHO05D010199 2.2e-83 313.2 291 57.0
Lalb_Chr19g0128481 Lupinus albus HOM05D008048 ORTHO05D010199 8.3e-83 311.2 294 58.5
Atru.chr4.1935 Acer truncatum HOM05D008048 ORTHO05D010199 1.1e-82 310.8 291 59.5
RcHm_v2.0_Chr4g0394961 Rosa chinensis HOM05D008048 ORTHO05D010199 2.7e-81 306.2 295 58.6
Gorai.002G026300 Gossypium raimondii HOM05D008048 ORTHO05D010199 3.8e-80 302.4 292 57.5
Ciclev10005562m.g Citrus clementina HOM05D008048 ORTHO05D010199 1.9e-79 300.1 291 55.3
TWI73G0695 Tripterygium wilfordii HOM05D008048 ORTHO05D010199 3.2e-79 299.3 298 58.4
AUR62002183 Chenopodium quinoa HOM05D008048 ORTHO05D010199 4.2e-79 298.9 298 54.0
Gohir.A01G025700 Gossypium hirsutum HOM05D008048 ORTHO05D010199 5.5e-79 298.5 292 56.8
Medtr1g045060 Medicago truncatula HOM05D008048 ORTHO05D010199 7.2e-79 298.1 293 55.3
Gohir.D01G023415 Gossypium hirsutum HOM05D008048 ORTHO05D010199 2.1e-78 296.6 292 57.2
Peaxi162Scf00033g00292 Petunia axillaris HOM05D008048 ORTHO05D010199 1.0e-77 294.3 289 52.6
MSTRG.4161 Avicennia marina HOM05D008048 ORTHO05D010199 1.8e-77 293.5 292 55.1
MD16G1225000 Malus domestica HOM05D008048 ORTHO05D010199 2.3e-77 293.1 291 56.0
Aqoxy5G00167 Aquilegia oxysepala HOM05D008048 ORTHO05D010199 2.0e-76 290.0 293 54.3
Sc25g0003600 Simmondsia chinensis HOM05D008048 ORTHO05D010199 2.0e-76 290.0 292 54.1
FAN17G0666 Fragaria x ananassa HOM05D008048 ORTHO05D010199 2.6e-76 289.7 296 57.4
PGSC0003DMG400017154 Solanum tuberosum HOM05D008048 ORTHO05D010199 4.8e-75 285.4 289 51.6
VMungo0720G0410 Vigna mungo HOM05D008048 ORTHO05D010199 1.1e-74 284.3 293 53.2
Ah.04g155360 Amaranthus hybridus HOM05D008048 ORTHO05D010199 1.4e-74 283.9 291 51.9
FvH4_4g04390 Fragaria vesca HOM05D008048 ORTHO05D010199 3.1e-74 282.7 279 58.1
Psat6g106440 Pisum sativum HOM05D008048 ORTHO05D010199 5.4e-74 282.0 284 53.9
Dinv29814 Davidia involucrata HOM05D008048 ORTHO05D010199 7.0e-74 281.6 255 58.8
Migut.G00487 Erythranthe guttata HOM05D008048 ORTHO05D010199 2.0e-73 280.0 292 54.1
Lsat_1_v5_gn_6_68700 Lactuca sativa HOM05D008048 ORTHO05D010199 2.7e-73 279.6 293 52.6
PGR004G1266 Punica granatum HOM05D008048 ORTHO05D010199 4.5e-73 278.9 296 55.7
CAN.G220.87 Capsicum annuum HOM05D008048 ORTHO05D010199 1.0e-72 277.7 289 50.5
TPR.G28751 Trifolium pratense HOM05D008048 ORTHO05D010199 1.0e-72 277.7 275 54.9
Phvul.007G271100 Phaseolus vulgaris HOM05D008048 ORTHO05D010199 1.3e-72 277.3 293 53.6
Sopen09g033500 Solanum pennellii HOM05D008048 ORTHO05D010199 1.3e-72 277.3 289 50.2
FAN22G2321 Fragaria x ananassa HOM05D008048 ORTHO05D010199 8.6e-72 274.6 296 54.7
MBI07_g18713_MAGBIO Magnolia biondii HOM05D008048 ORTHO05D010199 1.9e-71 273.5 291 52.9
Actinidia20832 Actinidia chinensis HOM05D008048 ORTHO05D010199 2.0e-68 263.5 264 55.3
Thecc.04G262100 Theobroma cacao HOM05D008048 ORTHO05D010199 4.9e-67 258.8 226 60.6
Lj6g0004811 Lotus japonicus HOM05D008048 ORTHO05D010199 7.0e-66 255.0 292 50.3
Nitab4.5_0002709g0050 Nicotiana tabacum HOM05D008048 ORTHO05D010199 7.0e-66 255.0 402 40.3
SalBow3G4414 Salvia bowleyana HOM05D008048 ORTHO05D010199 1.3e-64 250.8 294 50.3
Rhsim04G0173500 Rhododendron simsii HOM05D008048 ORTHO05D010199 1.5e-63 247.3 244 53.7
CiPaw.02G108000 Carya illinoinensis HOM05D008048 ORTHO05D010199 5.2e-61 238.8 291 51.5
Oeu002289.1 Olea europaea HOM05D008048 ORTHO05D010199 2.2e-59 233.4 292 46.6
Glyma.20G086000 Glycine max HOM05D008048 ORTHO05D010199 8.3e-59 231.5 269 50.9
SGA_v2.0_scaffold67G22704 Striga asiatica HOM05D008048 ORTHO05D010199 3.2e-58 229.6 227 55.1
Lj6P622T54 Lonicera japonica HOM05D008048 ORTHO05D010199 2.8e-46 189.9 158 62.0
Cpa.g.sc44.13 Carica papaya HOM05D008048 ORTHO05D010199 5.8e-44 182.2 183 49.2
GSVIVG01027901001 Vitis vinifera HOM05D008048 ORTHO05D010199 5.4e-42 175.6 162 58.0
DCAR_027338 Daucus carota HOM05D008048 ORTHO05D010199 1.5e-39 167.5 188 45.2
ATR0736G121 Amborella trichopoda HOM05D008048 ORTHO05D010199 2.4e-37 160.2 174 51.7
CAN.G220.88 Capsicum annuum HOM05D008048 ORTHO05D010199 1.7e-35 154.1 189 46.0
FAN12G0723 Fragaria x ananassa HOM05D008048 ORTHO05D010199 4.2e-34 149.4 151 55.6
FAN12G2845 Fragaria x ananassa HOM05D008048 ORTHO05D010199 4.2e-34 149.4 151 55.6
Solyc09g090560.2 Solanum lycopersicum HOM05D008048 ORTHO05D010199 2.4e-29 133.7 152 48.0
EL10Ac3g04955 Beta vulgaris HOM05D008048 ORTHO05D010199 3.1e-29 133.3 112 58.9
FAN12G1007 Fragaria x ananassa HOM05D008048 ORTHO05D010199 2.1e-25 120.6 109 61.5
FAN12G3146 Fragaria x ananassa HOM05D008048 ORTHO05D010199 2.1e-25 120.6 109 61.5
Ca_11923_v3 Cicer arietinum L. HOM05D008048 ORTHO05D010199 4.3e-23 112.8 109 52.3
Gohir.A11G062100 Gossypium hirsutum HOM05D007245 ORTHO05D009049 5.6e-23 112.5 297 31.0
Mapoly0103s0043 Marchantia polymorpha HOM05D007245 ORTHO05D009049 1.3e-22 111.3 268 32.8
Thecc.04G050800 Theobroma cacao HOM05D007245 ORTHO05D009049 1.6e-22 110.9 274 31.8
Gorai.007G071400 Gossypium raimondii HOM05D007245 ORTHO05D009049 2.1e-22 110.5 274 31.0
Gohir.D11G065900 Gossypium hirsutum HOM05D007245 ORTHO05D009049 4.8e-22 109.4 274 31.0
Duzib147G1224 Durio zibethinus HOM05D007245 ORTHO05D009049 6.9e-21 105.5 274 31.8
Hma1.2p1_0421F.1_g149920 Hydrangea macrophylla HOM05D007245 ORTHO05D009049 1.2e-20 104.8 272 32.7
SEGI_38415 Sequoiadendron giganteum HOM05D007245 ORTHO05D009049 2.0e-20 104.0 274 29.6
PGSC0003DMG400030518 Solanum tuberosum HOM05D007245 ORTHO05D009049 2.6e-20 103.6 296 28.4
CAN.G1489.19 Capsicum annuum HOM05D007245 ORTHO05D009049 3.8e-19 99.8 296 27.0
Dinv33262 Davidia involucrata HOM05D007245 ORTHO05D009049 3.8e-19 99.8 274 30.3
Sopen05g004430 Solanum pennellii HOM05D007245 ORTHO05D009049 3.8e-19 99.8 290 27.9
Manes.11G073800 Manihot esculenta HOM05D007245 ORTHO05D009049 4.9e-19 99.4 272 30.1
Nn3g16217 Nelumbo nucifera HOM05D007245 ORTHO05D009049 4.9e-19 99.4 276 29.3
Duzib187G0347 Durio zibethinus HOM05D007245 ORTHO05D009049 6.4e-19 99.0 274 30.7
Pp3c8_3270 Physcomitrium patens HOM05D007245 ORTHO05D009049 6.4e-19 99.0 292 30.1
CiPaw.03G000500 Carya illinoinensis HOM05D007245 ORTHO05D009049 1.1e-18 98.2 248 33.1
TAR629G1424 Trochodendron aralioides HOM05D007245 ORTHO05D009049 1.1e-18 98.2 274 29.9
CARHR199540 Cardamine hirsuta HOM05D007245 ORTHO05D009049 1.9e-18 97.4 270 28.9
Dinv25610 Davidia involucrata HOM05D007245 ORTHO05D009049 3.2e-18 96.7 273 30.8
Haze_14957 Corylus avellana HOM05D007245 ORTHO05D009049 5.4e-18 95.9 280 29.3
AL6G24530 Arabidopsis lyrata HOM05D007245 ORTHO05D009049 7.1e-18 95.5 268 28.7
AT5G13890 Arabidopsis thaliana HOM05D007245 ORTHO05D009049 1.2e-17 94.7 268 28.7
Carub.0006s1208 Capsella rubella HOM05D007245 ORTHO05D009049 3.5e-17 93.2 266 27.8
Cpa.g.sc70.41 Carica papaya HOM05D007245 ORTHO05D009049 3.5e-17 93.2 264 30.3
Thhalv10014197m.g Eutrema salsugineum HOM05D007245 ORTHO05D009049 4.6e-17 92.8 263 28.5
TAR374G0050 Trochodendron aralioides HOM05D000179 ORTHO05D009049 4.6e-17 92.8 291 28.2
Cc09_g07550 Coffea canephora HOM05D007245 ORTHO05D009049 6.0e-17 92.4 261 32.6
Atru.chr6.2722 Acer truncatum HOM05D007245 ORTHO05D009049 7.9e-17 92.0 272 29.8
MBI11_g03703_MAGBIO Magnolia biondii HOM05D007245 ORTHO05D009049 1.0e-16 91.7 273 31.5
Oeu050155.1 Olea europaea HOM05D007245 ORTHO05D009049 1.8e-16 90.9 300 26.7
Sp6g30110 Schrenkiella parvula HOM05D007245 ORTHO05D009049 1.8e-16 90.9 262 27.9
THA.LOC104822428 Tarenaya hassleriana HOM05D007245 ORTHO05D009049 1.8e-16 90.9 278 28.4
BcaC04g24245 Brassica carinata HOM05D007245 ORTHO05D009049 3.9e-16 89.7 265 30.9
SGA_v2.0_scaffold47G17641 Striga asiatica HOM05D007245 ORTHO05D009049 3.9e-16 89.7 279 29.4
BcaC04g19069 Brassica carinata HOM05D007245 ORTHO05D009049 5.1e-16 89.4 261 30.3
C09p63210 Brassica napus HOM05D007245 ORTHO05D009049 8.7e-16 88.6 261 30.3
BolC9t59157H Brassica oleracea HOM05D007245 ORTHO05D009049 8.7e-16 88.6 261 30.3
CSS0002235 Camellia sinensis var. sinensis HOM05D007245 ORTHO05D009049 1.1e-15 88.2 278 28.4
Glyma.19G106200 Glycine max HOM05D007245 ORTHO05D009049 1.5e-15 87.8 264 30.7
PSO478G0086 Papaver somniferum HOM05D007245 ORTHO05D009049 1.5e-15 87.8 275 28.4
SHI23073 Sapria himalayana HOM05D000105 ORTHO05D000023 1.5e-15 87.8 289 29.1
CSS0018621 Camellia sinensis var. sinensis HOM05D007245 ORTHO05D009049 1.9e-15 87.4 282 27.3
PSO017G6414 Papaver somniferum HOM05D007245 ORTHO05D009049 2.5e-15 87.0 277 28.5
Sed0008898 Sechium edule HOM05D007245 ORTHO05D009049 2.5e-15 87.0 268 26.1
Aa31LG11G15470 Aethionema arabicum HOM05D007245 ORTHO05D009049 3.3e-15 86.7 264 30.3
BraA10t44512Z Brassica rapa HOM05D007245 ORTHO05D009049 3.3e-15 86.7 264 28.0
A10p24470 Brassica napus HOM05D007245 ORTHO05D009049 4.3e-15 86.3 264 28.0
Sed0013025 Sechium edule HOM05D007245 ORTHO05D009049 4.3e-15 86.3 278 26.3
MSTRG.15573 Avicennia marina HOM05D007245 ORTHO05D009049 5.6e-15 85.9 274 28.1
QL02p068579 Quercus lobata HOM05D007245 ORTHO05D009049 5.6e-15 85.9 266 29.3
SalBow7G3959 Salvia bowleyana HOM05D007245 ORTHO05D009049 5.6e-15 85.9 279 27.6
Nitab4.5_0005411g0120 Nicotiana tabacum HOM05D007245 ORTHO05D009049 9.6e-15 85.1 278 27.3
RcHm_v2.0_Chr2g0176701 Rosa chinensis HOM05D007245 ORTHO05D009049 9.6e-15 85.1 302 28.1
Lj7P619T29 Lonicera japonica HOM05D007245 ORTHO05D009049 1.3e-14 84.7 305 25.2
HanXRQChr09g0245251 Helianthus annuus HOM05D007245 ORTHO05D009049 1.6e-14 84.3 259 28.2
Aqoxy2G01225 Aquilegia oxysepala HOM05D007245 ORTHO05D009049 2.8e-14 83.6 308 25.0
Lalb_Chr24g0402921 Lupinus albus HOM05D007245 ORTHO05D009049 2.8e-14 83.6 272 28.3
TWI32G1326 Tripterygium wilfordii HOM05D007245 ORTHO05D009049 2.8e-14 83.6 186 31.2
Actinidia37711 Actinidia chinensis HOM05D007245 ORTHO05D009049 3.7e-14 83.2 255 29.4
MELO3C014761.2 Cucumis melo HOM05D007245 ORTHO05D009049 4.8e-14 82.8 286 25.2
Nitab4.5_0005095g0010 Nicotiana tabacum HOM05D007245 ORTHO05D009049 8.1e-14 82.0 221 28.1
CsaV3_3G020030 Cucumis sativus L. HOM05D007245 ORTHO05D009049 1.1e-13 81.6 286 24.8
Lsat_1_v5_gn_2_60460 Lactuca sativa HOM05D007245 ORTHO05D009049 1.1e-13 81.6 278 26.6
PGR142G1730 Punica granatum HOM05D007245 ORTHO05D009049 1.4e-13 81.3 287 28.9
unitig_0.g2407 Utricularia gibba HOM05D007245 ORTHO05D009049 1.4e-13 81.3 196 32.1
Peaxi162Scf00950g00032 Petunia axillaris HOM05D007245 ORTHO05D009049 1.8e-13 80.9 264 29.2
Potri.002G237200 Populus trichocarpa HOM05D007245 ORTHO05D009049 1.8e-13 80.9 266 27.8
ClCG05G012490 Citrullus lanatus HOM05D007245 ORTHO05D009049 2.4e-13 80.5 286 24.5
ATR0582G351 Amborella trichopoda HOM05D007245 ORTHO05D009049 3.1e-13 80.1 300 27.7
FvH4_6g31080 Fragaria vesca HOM05D007245 ORTHO05D009049 3.1e-13 80.1 281 26.7
Ciclev10016068m.g Citrus clementina HOM05D007245 ORTHO05D009049 4.0e-13 79.7 275 28.7
Migut.K01486 Erythranthe guttata HOM05D007245 ORTHO05D009049 4.0e-13 79.7 253 26.9
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 5.3e-13 79.3 141 39.0
FAN05G2831 Fragaria x ananassa HOM05D007245 ORTHO05D009049 9.0e-13 78.6 281 25.6
Oeu045577.1 Olea europaea HOM05D007245 ORTHO05D009049 9.0e-13 78.6 300 26.3
MD17G1004200 Malus domestica HOM05D007245 ORTHO05D009049 1.5e-12 77.8 284 25.7
Ah.03g136550 Amaranthus hybridus HOM05D001378 ORTHO05D001249 2.6e-12 77.0 253 29.6
RcHm_v2.0_Chr2g0137761 Rosa chinensis HOM05D007245 ORTHO05D009049 3.4e-12 76.6 283 25.1
SMO329G0038 Selaginella moellendorffii HOM05D007245 ORTHO05D009049 3.4e-12 76.6 254 26.4
ECA238G1127 Erigeron canadensis HOM05D007245 ORTHO05D009049 7.6e-12 75.5 250 26.8
Pp3c4_3800 Physcomitrium patens HOM05D007245 ORTHO05D009049 7.6e-12 75.5 193 30.1
vmacro18400 Vaccinium macrocarpon HOM05D007245 ORTHO05D009049 7.6e-12 75.5 307 26.1
Prupe.7G011800 Prunus persica HOM05D007245 ORTHO05D009049 1.0e-11 75.1 282 25.9
CANSAT64G0979 Cannabis sativa HOM05D007245 ORTHO05D009049 1.7e-11 74.3 278 25.9
Phvul.001G099200 Phaseolus vulgaris HOM05D007245 ORTHO05D009049 2.2e-11 73.9 276 29.3
Sabra02G0180800 Salix brachista HOM05D007245 ORTHO05D009049 2.9e-11 73.6 131 35.1
TAR365G0106 Trochodendron aralioides HOM05D008048 ORTHO05D010199 2.9e-11 73.6 110 39.1
MD09G1001100 Malus domestica HOM05D007245 ORTHO05D009049 4.9e-11 72.8 283 25.4
DCAR_000961 Daucus carota HOM05D007245 ORTHO05D009049 6.5e-11 72.4 266 25.6
CDE06G2711 Ceratophyllum demersum HOM05D007245 ORTHO05D009049 7.1e-10 68.9 295 26.1
AagrBONN_evm.TU.Sc2ySwM_369.440 Anthoceros agrestis HOM05D007245 ORTHO05D009049 9.3e-10 68.6 282 27.0
Psat3g091920 Pisum sativum HOM05D007245 ORTHO05D009049 3.5e-09 66.6 123 31.7
Rhsim08G0037800 Rhododendron simsii HOM05D007245 ORTHO05D009049 4.6e-09 66.2 276 26.1
SGA_v2.0_scaffold34G13684 Striga asiatica HOM05D007245 ORTHO05D009049 6.0e-09 65.9 302 25.8
Medtr7g084610 Medicago truncatula HOM05D007245 ORTHO05D009049 2.3e-08 63.9 250 29.2
Ca_08230_v3 Cicer arietinum L. HOM05D007245 ORTHO05D009049 3.0e-08 63.5 110 32.7
Manes.04G095000 Manihot esculenta HOM05D007245 ORTHO05D009049 8.7e-08 62.0 293 25.6
Sc03g0005330 Simmondsia chinensis HOM05D007245 ORTHO05D009049 1.1e-07 61.6 269 24.9
Lj1g0022763 Lotus japonicus HOM05D007245 ORTHO05D009049 1.5e-07 61.2 264 26.1
TPR.G31664 Trifolium pratense HOM05D007245 ORTHO05D009049 2.5e-07 60.5 268 25.7
CDE02G4767 Ceratophyllum demersum HOM05D007245 ORTHO05D009049 7.4e-07 58.9 291 24.7
VMungo1383G3535 Vigna mungo HOM05D007245 ORTHO05D009049 7.4e-07 58.9 273 27.5


User provided reference genes

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