Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 1.4e-119 433.0 223 100.0
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 3.1e-98 362.1 208 88.0
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 1.4e-82 310.1 222 77.0
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 2.0e-81 306.2 222 73.0
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 1.2e-54 217.2 221 56.1
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 3.9e-48 195.7 219 49.3
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 4.7e-46 188.7 230 48.3
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 6.2e-46 188.3 222 50.5
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 1.8e-45 186.8 228 50.0
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 8.9e-45 184.5 220 46.4
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 1.5e-44 183.7 217 48.4
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 2.6e-44 183.0 225 47.6
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 3.4e-44 182.6 222 46.8
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 4.4e-44 182.2 220 45.9
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 5.8e-44 181.8 224 47.8
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 5.8e-44 181.8 225 47.1
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 1.9e-42 176.8 225 46.2
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 1.9e-42 176.8 227 48.9
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 2.7e-41 172.9 228 47.4
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 4.6e-41 172.2 185 51.9
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 5.1e-40 168.7 228 49.1
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 8.6e-40 167.9 228 46.9
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 8.6e-40 167.9 217 46.5
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 1.5e-39 167.2 207 45.4
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 1.5e-39 167.2 231 46.3
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 1.9e-39 166.8 219 47.0
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 4.3e-39 165.6 208 41.3
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 1.2e-38 164.1 218 44.5
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 2.1e-38 163.3 237 42.2
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 2.1e-38 163.3 224 44.6
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 4.7e-38 162.2 203 43.3
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 8.1e-38 161.4 215 41.9
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.1e-37 161.0 201 49.8
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 1.8e-37 160.2 238 42.0
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 1.8e-37 160.2 220 45.9
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 6.9e-37 158.3 227 43.6
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 8.9e-37 157.9 215 42.3
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.2e-36 157.5 205 49.3
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 1.2e-36 157.5 227 43.2
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 5.8e-36 155.2 235 42.6
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 2.9e-35 152.9 200 42.5
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 3.8e-35 152.5 171 52.0
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.1e-34 151.0 201 43.3
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 1.1e-34 151.0 201 42.8
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 1.4e-34 150.6 207 45.9
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 9.3e-34 147.9 170 47.1
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 3.5e-33 146.0 206 44.2
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 6.0e-33 145.2 201 43.8
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 1.3e-32 144.1 234 39.7
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.7e-32 143.7 206 43.7
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.9e-32 142.5 168 44.6
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 6.6e-32 141.7 234 38.9
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 6.6e-32 141.7 230 37.0
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 8.7e-32 141.4 228 41.2
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 2.5e-31 139.8 201 40.8
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 5.6e-31 138.7 234 39.7
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 7.3e-31 138.3 199 40.2
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 7.3e-31 138.3 200 42.0
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 9.6e-31 137.9 229 41.0
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 1.6e-30 137.1 228 40.4
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 1.6e-30 137.1 241 37.3
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 2.8e-30 136.3 138 52.9
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 8.1e-30 134.8 237 38.0
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 8.1e-30 134.8 239 37.2
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 1.4e-29 134.0 232 37.1
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 1.8e-29 133.7 200 42.5
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 3.1e-29 132.9 221 38.5
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 3.1e-29 132.9 221 38.5
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 4.0e-29 132.5 224 37.9
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 1.2e-28 131.0 244 36.5
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 1.5e-28 130.6 163 46.6
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 2.6e-28 129.8 228 38.6
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 2.6e-28 129.8 198 39.9
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 3.4e-28 129.4 228 36.8
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 4.5e-28 129.0 237 37.6
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 7.6e-28 128.3 213 36.6
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 9.9e-28 127.9 197 41.1
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 9.9e-28 127.9 226 38.9
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 1.7e-27 127.1 230 34.8
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 4.9e-27 125.6 185 38.9
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 4.9e-27 125.6 177 40.7
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 1.4e-26 124.0 202 39.1
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 1.9e-26 123.6 179 42.5
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 2.4e-26 123.2 200 38.5
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 4.2e-26 122.5 202 39.1
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 4.2e-26 122.5 202 39.1
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 4.2e-26 122.5 202 39.1
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 1.3e-24 117.5 174 39.7
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 1.8e-24 117.1 174 37.4
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 3.0e-24 116.3 189 39.2
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 1.5e-23 114.0 240 35.8
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 2.5e-23 113.2 210 32.9
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 3.3e-23 112.8 195 39.5
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 2.1e-22 110.2 226 34.1
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 3.6e-22 109.4 152 43.4
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 2.4e-21 106.7 103 55.3
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 1.3e-19 100.9 215 38.6
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 2.4e-18 96.7 223 32.3
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 7.1e-18 95.1 142 38.7
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 7.9e-17 91.7 104 45.2
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 8.7e-16 88.2 227 29.5
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 4.3e-15 85.9 146 36.3
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 1.3e-14 84.3 113 45.1
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 2.6e-12 76.6 190 33.2
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 3.8e-11 72.8 188 33.0
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 3.8e-11 72.8 184 32.1
Zm00001eb370010 Zea mays HOM05D007216 ORTHO05D049898 1.9e-07 60.5 205 28.3
FAN19G2456 Fragaria x ananassa HOM05D004059 ORTHO05D004591 5.7e-07 58.9 128 32.8
FvH4_1g07710 Fragaria vesca HOM05D004059 ORTHO05D004591 9.6e-07 58.2 124 33.1
Lalb_Chr08g0232291 Lupinus albus HOM05D004059 ORTHO05D004591 8.2e-06 55.1 148 34.5
Os01g0773800 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D049898 8.2e-06 55.1 190 28.9


User provided reference genes

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