Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 3.3e-144 515.0 257 100.0
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 2.9e-132 475.3 257 92.6
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.8e-129 466.1 257 91.1
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 7.2e-123 444.1 257 87.5
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 6.7e-121 437.6 257 84.4
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 8.8e-121 437.2 257 84.4
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 8.8e-121 437.2 257 84.4
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 1.5e-120 436.4 257 84.4
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 1.1e-118 430.3 257 83.7
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 9.1e-118 427.2 254 83.9
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 2.0e-117 426.0 257 82.9
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 2.7e-117 425.6 257 82.5
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 7.7e-117 424.1 259 83.8
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 1.3e-116 423.3 257 82.1
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 1.7e-116 422.9 257 82.1
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 1.7e-116 422.9 257 82.1
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.2e-116 422.5 280 77.1
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 3.8e-116 421.8 259 83.4
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 8.5e-116 420.6 259 81.9
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.9e-115 419.5 259 83.0
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 4.2e-115 418.3 257 80.9
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 4.2e-115 418.3 259 81.5
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 9.4e-115 417.2 251 82.5
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.6e-114 416.4 257 81.7
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.6e-114 416.4 259 81.5
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 1.6e-114 416.4 259 81.5
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 2.1e-114 416.0 257 81.7
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 3.6e-114 415.2 259 81.1
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 8.0e-114 414.1 257 80.5
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 2.3e-113 412.5 258 81.4
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 4.0e-113 411.8 257 81.3
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 6.8e-113 411.0 257 80.5
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 1.2e-112 410.2 258 81.0
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 1.2e-112 410.2 257 81.3
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 1.7e-111 406.4 257 80.9
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 3.7e-111 405.2 254 80.7
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 3.7e-111 405.2 254 80.7
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 3.7e-111 405.2 257 78.6
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 3.7e-111 405.2 258 77.9
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 1.8e-110 402.9 254 79.1
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 1.8e-110 402.9 254 79.1
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 2.4e-110 402.5 257 79.0
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.2e-109 400.2 254 79.1
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 1.6e-109 399.8 265 78.5
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 2.0e-109 399.4 254 79.1
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 2.7e-109 399.1 257 78.6
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 3.5e-109 398.7 256 80.5
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 3.5e-109 398.7 258 78.7
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 1.3e-108 396.7 259 78.4
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 6.5e-108 394.4 265 77.7
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 8.5e-108 394.0 258 78.3
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 1.1e-107 393.7 255 78.0
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 1.9e-107 392.9 252 79.8
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 9.5e-107 390.6 257 78.2
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 4.7e-106 388.3 258 75.6
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 6.1e-106 387.9 258 76.0
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 6.1e-106 387.9 258 76.0
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 2.3e-105 386.0 259 75.3
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 4.0e-105 385.2 259 75.3
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 5.2e-105 384.8 255 76.9
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 1.2e-104 383.6 258 75.2
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 2.0e-104 382.9 260 75.4
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 3.4e-104 382.1 258 74.8
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 9.8e-104 380.6 255 75.3
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 1.7e-103 379.8 259 75.3
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 1.7e-103 379.8 259 75.3
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 1.7e-103 379.8 259 75.3
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 1.7e-103 379.8 259 75.3
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 1.7e-103 379.8 259 75.3
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 4.9e-103 378.3 251 78.1
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 1.1e-102 377.1 255 76.5
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 1.4e-102 376.7 257 77.4
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 2.4e-102 375.9 257 76.3
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 4.5e-101 371.7 257 74.3
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 1.3e-100 370.2 258 75.6
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 2.3e-100 369.4 241 77.6
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 7.3e-99 364.4 257 72.8
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 1.6e-98 363.2 255 72.5
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 1.6e-98 363.2 255 72.5
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 1.6e-98 363.2 255 72.5
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 6.1e-98 361.3 256 73.0
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 1.8e-97 359.8 254 73.6
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 2.9e-95 352.4 254 71.7
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 1.1e-94 350.5 255 71.0
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 5.4e-94 348.2 257 70.4
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 9.2e-94 347.4 254 70.5
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 3.5e-93 345.5 255 70.2
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 3.9e-92 342.0 255 70.6
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 6.6e-92 341.3 256 69.9
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 8.6e-92 340.9 256 69.1
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 2.5e-91 339.3 262 70.2
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 1.2e-90 337.0 254 72.4
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 1.6e-90 336.7 255 69.4
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 5.2e-89 331.6 250 70.0
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 5.2e-89 331.6 250 70.0
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 4.4e-88 328.6 255 69.0
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 6.4e-87 324.7 250 69.2
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 3.2e-86 322.4 219 76.3
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 3.2e-86 322.4 227 74.0
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 7.0e-86 321.2 248 68.5
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 2.6e-72 276.2 196 71.4
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 1.6e-69 266.9 256 56.2
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 1.0e-68 264.2 176 76.1
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 1.7e-68 263.5 254 58.3
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 3.0e-68 262.7 288 50.0
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 2.8e-66 256.1 257 55.6
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 1.2e-56 224.2 300 43.3
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 4.5e-48 195.7 163 58.9
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 5.1e-44 182.2 149 59.7
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 5.6e-43 178.7 165 52.1
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 1.0e-31 141.4 200 46.5
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 2.7e-29 133.3 224 34.4
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 1.1e-27 127.9 168 38.7
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 6.9e-25 118.6 70 81.4
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 9.1e-25 118.2 98 64.3
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 6.5e-23 112.1 168 37.5


User provided reference genes

Program Settings