Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G149800 Populus trichocarpa HOM05D006587 ORTHO05D008487 4.0e-191 671.4 367 100.0
Sabra08G0113900 Salix brachista HOM05D006587 ORTHO05D008487 1.4e-159 566.6 298 94.0
Potri.010G091400 Populus trichocarpa HOM05D006587 ORTHO05D008487 1.9e-148 529.6 365 78.9
Manes.03G181700 Manihot esculenta HOM05D006587 ORTHO05D008487 3.5e-147 525.4 315 83.8
CSS0008441 Camellia sinensis var. sinensis HOM05D006587 ORTHO05D008487 9.9e-142 507.3 316 78.2
Cfa015608 Carpinus fangiana HOM05D006587 ORTHO05D006035 1.3e-141 506.9 308 82.1
GSVIVG01017920001 Vitis vinifera HOM05D006587 ORTHO05D008487 1.7e-141 506.5 368 70.1
Hma1.2p1_0511F.1_g168960 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 1.9e-140 503.1 310 79.4
Thecc.04G226500 Theobroma cacao HOM05D006587 ORTHO05D008487 4.2e-140 501.9 313 79.2
CANSAT78G1956 Cannabis sativa HOM05D006587 ORTHO05D008487 1.6e-139 500.0 314 77.1
PGR004G2885 Punica granatum HOM05D006587 ORTHO05D008487 1.6e-139 500.0 316 78.2
Actinidia23494 Actinidia chinensis HOM05D006587 ORTHO05D008487 2.1e-139 499.6 307 79.5
Prupe.1G154500 Prunus persica HOM05D006587 ORTHO05D008487 2.1e-139 499.6 313 80.8
Atru.chr4.2522 Acer truncatum HOM05D006587 ORTHO05D008487 3.5e-139 498.8 364 72.0
TWI73G1280 Tripterygium wilfordii HOM05D006587 ORTHO05D008487 2.3e-138 496.1 310 79.7
TAR362G0294 Trochodendron aralioides HOM05D006587 ORTHO05D008487 9.6e-137 490.7 316 76.9
Actinidia40165 Actinidia chinensis HOM05D006587 ORTHO05D008487 2.8e-136 489.2 303 79.2
Rhsim04G0204300 Rhododendron simsii HOM05D006587 ORTHO05D008487 2.8e-136 489.2 310 77.7
Ciclev10005176m.g Citrus clementina HOM05D006587 ORTHO05D008487 6.2e-136 488.0 311 78.1
THA.LOC104818820 Tarenaya hassleriana HOM05D006587 ORTHO05D008487 1.1e-135 487.3 316 75.6
MD13G1186800 Malus domestica HOM05D006587 ORTHO05D008487 9.0e-135 484.2 307 79.2
CiPaw.02G094600 Carya illinoinensis HOM05D006587 ORTHO05D008487 2.6e-134 482.6 367 68.4
Gorai.002G024100 Gossypium raimondii HOM05D006587 ORTHO05D008487 2.6e-134 482.6 315 74.6
Cc03_g03390 Coffea canephora HOM05D006587 ORTHO05D008487 3.4e-134 482.3 306 76.1
Gohir.A01G023600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 4.5e-134 481.9 315 74.3
Gohir.D01G021600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 4.5e-134 481.9 315 74.6
Nitab4.5_0000144g0120 Nicotiana tabacum HOM05D006587 ORTHO05D008487 9.9e-134 480.7 365 67.9
TAR633G1367 Trochodendron aralioides HOM05D006587 ORTHO05D008487 9.9e-134 480.7 316 76.3
RcHm_v2.0_Chr4g0417131 Rosa chinensis HOM05D006587 ORTHO05D008487 6.4e-133 478.0 309 78.3
ECA236G2554 Erigeron canadensis HOM05D006587 ORTHO05D008487 1.4e-132 476.9 304 77.0
Eucgr.H03560 Eucalyptus grandis HOM05D006587 ORTHO05D008487 2.4e-132 476.1 313 74.8
FAN12G2172 Fragaria x ananassa HOM05D006587 ORTHO05D006391 4.2e-132 475.3 306 76.8
MD16G1187700 Malus domestica HOM05D006587 ORTHO05D008487 4.2e-132 475.3 363 69.7
Thhalv10013731m.g Eutrema salsugineum HOM05D006587 ORTHO05D008487 5.4e-132 474.9 307 76.5
FAN07G2036 Fragaria x ananassa HOM05D006587 ORTHO05D008487 7.1e-132 474.6 369 67.5
MSTRG.24750 Avicennia marina HOM05D006587 ORTHO05D008487 9.3e-132 474.2 315 74.9
Sc19g0004360 Simmondsia chinensis HOM05D006587 ORTHO05D008487 1.2e-131 473.8 317 73.8
Lsat_1_v5_gn_9_80941 Lactuca sativa HOM05D006587 ORTHO05D008487 2.1e-131 473.0 301 77.7
ClCG05G005300 Citrullus lanatus HOM05D006587 ORTHO05D008487 7.9e-131 471.1 317 75.1
Migut.N00169 Erythranthe guttata HOM05D006587 ORTHO05D008487 7.9e-131 471.1 320 73.1
BcaC04g18580 Brassica carinata HOM05D006587 ORTHO05D008487 1.3e-130 470.3 315 74.3
CAN.G69.11 Capsicum annuum HOM05D006587 ORTHO05D008487 1.3e-130 470.3 365 69.0
Solyc01g079710.3 Solanum lycopersicum HOM05D006587 ORTHO05D008487 1.3e-130 470.3 365 65.5
BolC9t58560H Brassica oleracea HOM05D006587 ORTHO05D008487 1.8e-130 469.9 310 75.2
C09p56970 Brassica napus HOM05D006587 ORTHO05D008487 3.0e-130 469.2 312 74.7
Sopen01g031480 Solanum pennellii HOM05D006587 ORTHO05D008487 3.0e-130 469.2 364 65.1
MELO3C006549.2 Cucumis melo HOM05D006587 ORTHO05D008487 5.1e-130 468.4 313 75.4
Carub.0006s1763 Capsella rubella HOM05D006587 ORTHO05D008487 6.7e-130 468.0 305 75.4
AL6G30780 Arabidopsis lyrata HOM05D006587 ORTHO05D008487 1.5e-129 466.8 305 75.1
CsaV3_3G013530 Cucumis sativus L. HOM05D006587 ORTHO05D008487 1.9e-129 466.5 313 75.1
HanXRQChr13g0400281 Helianthus annuus HOM05D006587 ORTHO05D008487 1.9e-129 466.5 304 75.3
AT5G19300 Arabidopsis thaliana HOM05D006587 ORTHO05D008487 3.3e-129 465.7 305 75.7
Haze_00934 Corylus avellana HOM05D006587 ORTHO05D008487 4.3e-129 465.3 308 76.0
TPR.G5533 Trifolium pratense HOM05D006587 ORTHO05D008487 4.3e-129 465.3 309 75.4
BcaB08g36587 Brassica carinata HOM05D006587 ORTHO05D008487 7.4e-129 464.5 303 75.9
BraA10t44108Z Brassica rapa HOM05D006587 ORTHO05D008487 1.3e-128 463.8 306 75.2
DCAR_002398 Daucus carota HOM05D006587 ORTHO05D008487 1.3e-128 463.8 318 71.4
Lalb_Chr06g0164781 Lupinus albus HOM05D006587 ORTHO05D008487 1.3e-128 463.8 304 76.0
CARHR193670 Cardamine hirsuta HOM05D006587 ORTHO05D008487 2.8e-128 462.6 303 75.9
Sp6g25120 Schrenkiella parvula HOM05D006587 ORTHO05D008487 3.7e-128 462.2 309 74.4
VMungo0720G0184 Vigna mungo HOM05D006587 ORTHO05D008487 6.2e-128 461.5 305 75.7
A10p20380 Brassica napus HOM05D006587 ORTHO05D008487 4.0e-127 458.8 306 74.5
Glyma.20G143100 Glycine max HOM05D006587 ORTHO05D008487 4.0e-127 458.8 305 75.4
Sed0010167 Sechium edule HOM05D006587 ORTHO05D008487 6.9e-127 458.0 317 73.2
PSO302G0285 Papaver somniferum HOM05D006587 ORTHO05D008487 9.0e-127 457.6 306 72.9
SalBow5G0644 Salvia bowleyana HOM05D006587 ORTHO05D008487 4.5e-126 455.3 359 67.4
Medtr1g105065 Medicago truncatula HOM05D006587 ORTHO05D008487 9.9e-126 454.1 319 73.0
PSO170G4636 Papaver somniferum HOM05D006587 ORTHO05D008487 1.7e-125 453.4 306 72.5
PGSC0003DMG400008999 Solanum tuberosum HOM05D006587 ORTHO05D008487 2.9e-125 452.6 399 60.2
Ca_10966_v3 Cicer arietinum L. HOM05D006587 ORTHO05D008487 3.8e-125 452.2 308 72.7
Lj5g0006939 Lotus japonicus HOM05D006587 ORTHO05D008487 8.4e-125 451.1 308 73.7
Phvul.007G053900 Phaseolus vulgaris HOM05D006587 ORTHO05D008487 9.3e-124 447.6 309 72.8
Aa31LG11G10390 Aethionema arabicum HOM05D006587 ORTHO05D008487 2.1e-123 446.4 319 72.4
Psat6g209880 Pisum sativum HOM05D006587 ORTHO05D008487 2.1e-123 446.4 310 73.5
FAN22G2243 Fragaria x ananassa HOM05D000104 ORTHO05D006391 7.9e-123 444.5 292 75.7
FAN17G1856 Fragaria x ananassa HOM05D000104 ORTHO05D006391 1.3e-122 443.7 373 65.1
Hma1.2p1_0511F.1_g168950 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 6.7e-122 441.4 288 75.0
Ah.13g074000 Amaranthus hybridus HOM05D006587 ORTHO05D008487 8.7e-122 441.0 306 70.9
Dinv44504 Davidia involucrata HOM05D006587 ORTHO05D008487 3.3e-121 439.1 248 84.3
arahy.Tifrunner.gnm1.ann1.G9UJER Arachis hypogaea HOM05D006587 ORTHO05D008487 4.3e-121 438.7 306 72.9
arahy.Tifrunner.gnm1.ann1.HZWC9V Arachis hypogaea HOM05D006587 ORTHO05D008487 5.6e-121 438.3 306 73.5
MBI17_g12493_MAGBIO Magnolia biondii HOM05D006587 ORTHO05D008487 7.4e-121 438.0 282 73.8
EL10As3g23313 Beta vulgaris HOM05D006587 ORTHO05D008487 2.1e-120 436.4 363 63.9
HPP92_010726 Vanilla planifolia HOM05D006587 ORTHO05D008487 6.2e-120 434.9 308 69.5
Dinv38415 Davidia involucrata HOM05D006587 ORTHO05D008487 2.6e-118 429.5 265 80.8
Peaxi162Scf01336g00122 Petunia axillaris HOM05D006587 ORTHO05D008487 3.4e-118 429.1 306 70.6
SalBow5G2730 Salvia bowleyana HOM05D006587 ORTHO05D008487 4.9e-117 425.2 343 66.2
Os04g0244500 Oryza sativa ssp. japonica HOM05D006587 ORTHO05D008487 1.1e-116 424.1 301 70.4
Aqoxy2G03329 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 4.2e-116 422.2 317 65.9
Sabra10G0051900 Salix brachista HOM05D006587 ORTHO05D008487 2.1e-115 419.9 300 71.7
SGA_v2.0_scaffold10G05110 Striga asiatica HOM05D006587 ORTHO05D008487 3.7e-112 409.1 319 66.5
Nitab4.5_0000180g0030 Nicotiana tabacum HOM05D006587 ORTHO05D008487 2.9e-109 399.4 365 59.5
Cpa.g.sc147.29 Carica papaya HOM05D006587 ORTHO05D008487 3.9e-106 389.0 238 81.5
QL06p003535 Quercus lobata HOM05D006587 ORTHO05D008487 7.4e-105 384.8 246 76.8
Lj3A741G38 Lonicera japonica HOM05D006587 ORTHO05D008487 9.7e-105 384.4 291 67.7
AUR62043415 Chenopodium quinoa HOM05D006587 ORTHO05D008487 4.5e-102 375.6 265 67.5
ATR0626G244 Amborella trichopoda HOM05D006587 ORTHO05D008487 1.5e-94 350.5 259 68.0
unitig_899.g15640 Utricularia gibba HOM05D006587 ORTHO05D008487 1.6e-91 340.5 318 59.7
SMO364G0578 Selaginella moellendorffii HOM05D006587 ORTHO05D008487 3.7e-88 329.3 306 56.5
Mapoly0049s0075 Marchantia polymorpha HOM05D006587 ORTHO05D008487 1.7e-85 320.5 304 51.0
Duzib151G0305 Durio zibethinus HOM05D006587 ORTHO05D008487 2.9e-85 319.7 309 58.6
Pp3c7_20660 Physcomitrium patens HOM05D006587 ORTHO05D008487 1.1e-84 317.8 304 53.6
Aqoxy2G03328 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 3.8e-77 292.7 310 55.8
AUR62038173 Chenopodium quinoa HOM05D006587 ORTHO05D008487 2.6e-73 280.0 282 52.5
CSS0044999 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 5.7e-73 278.9 247 59.5
PRCOL_00002662 Prasinoderma coloniale HOM05D006587 ORTHO05D008487 2.8e-72 276.6 325 46.8
CSS0022730 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 5.4e-71 272.3 271 54.6
Zm00001eb373340 Zea mays HOM05D006587 ORTHO05D008487 1.5e-68 264.2 209 66.5
FvH4_4g14960 Fragaria vesca HOM05D006587 ORTHO05D008487 1.0e-61 241.5 170 72.9
CDE05G0907 Ceratophyllum demersum HOM05D006587 ORTHO05D008487 1.1e-60 238.0 173 69.4
Oeu040660.1 Olea europaea HOM05D006587 ORTHO05D008487 1.9e-52 210.7 146 74.0
Cfa024389 Carpinus fangiana HOM05D006587 ORTHO05D008487 1.4e-50 204.5 364 36.8
COL.COLO4_06205 Corchorus olitorius HOM05D006587 ORTHO05D008487 2.6e-49 200.3 199 56.3
Lalb_Chr02g0144661 Lupinus albus HOM05D006587 ORTHO05D008487 2.1e-43 180.6 182 56.0
Glyma.10G250600 Glycine max HOM05D006587 ORTHO05D008487 8.1e-43 178.7 124 73.4
Cre16.g670617 Chlamydomonas reinhardtii HOM05D006587 ORTHO05D008487 1.4e-42 177.9 344 34.3
AagrBONN_evm.TU.Sc2ySwM_340.504 Anthoceros agrestis HOM05D006587 ORTHO05D008487 1.8e-42 177.6 187 53.5
QL06p003531 Quercus lobata HOM05D006587 ORTHO05D008487 1.3e-29 134.8 73 86.3
Lalb_Chr02g0144651 Lupinus albus HOM05D006587 ORTHO05D008487 1.2e-14 85.1 61 63.9
Lsat_1_v5_gn_9_31900 Lactuca sativa HOM05D006587 ORTHO05D011576 2.5e-12 77.4 45 75.6
TAR362G0446 Trochodendron aralioides HOM05D006587 ORTHO05D008487 1.3e-11 75.1 51 78.4
AUR62038172 Chenopodium quinoa HOM05D006503 ORTHO05D008116 1.6e-11 74.7 103 41.7
Gorai.004G106600 Gossypium raimondii HOM05D006587 ORTHO05D008487 1.1e-10 72.0 51 74.5
SEGI_15408 Sequoiadendron giganteum HOM05D006587 ORTHO05D008487 1.8e-10 71.2 45 66.7
PSO151G0052 Papaver somniferum HOM05D004736 ORTHO05D030424 3.1e-10 70.5 74 51.4
arahy.Tifrunner.gnm1.ann1.Y836FI Arachis hypogaea HOM05D000158 ORTHO05D000197 5.8e-09 66.2 39 74.4
Gorai.012G092500 Gossypium raimondii HOM05D006587 ORTHO05D008487 8.4e-08 62.4 47 68.1
SEGI_20820 Sequoiadendron giganteum HOM05D006587 ORTHO05D008487 1.4e-07 61.6 38 81.6


User provided reference genes

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