Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 3.0e-168 595.1 303 100.0
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 4.9e-155 551.2 303 92.7
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 2.8e-150 535.4 302 88.1
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 7.6e-148 527.3 303 85.1
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 2.5e-146 522.3 303 86.8
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 2.5e-146 522.3 303 86.8
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 1.3e-144 516.5 302 85.8
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 2.5e-143 512.3 305 84.9
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 1.3e-142 510.0 302 84.4
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 4.8e-142 508.1 300 84.7
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 5.3e-141 504.6 303 81.2
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 9.0e-141 503.8 301 83.7
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 9.0e-141 503.8 303 81.8
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 1.2e-140 503.4 275 94.2
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 2.0e-140 502.7 301 82.1
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.4e-140 501.9 303 80.9
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 3.4e-140 501.9 303 80.9
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 1.7e-139 499.6 303 81.8
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.7e-139 499.6 301 83.1
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 2.2e-139 499.2 302 82.5
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 3.8e-139 498.4 303 82.2
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 6.5e-139 497.7 301 82.4
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 2.5e-138 495.7 301 82.7
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 2.5e-138 495.7 301 82.7
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 2.5e-138 495.7 303 81.5
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 3.2e-138 495.4 303 83.2
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 4.2e-138 495.0 303 82.2
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 5.5e-138 494.6 303 80.5
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 7.2e-138 494.2 303 83.2
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 7.2e-138 494.2 303 83.2
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 2.1e-137 492.7 301 81.1
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.6e-137 491.9 303 81.5
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 3.6e-137 491.9 303 80.9
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 4.6e-137 491.5 303 81.2
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 6.1e-137 491.1 299 80.9
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 1.0e-136 490.3 301 81.1
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 1.8e-136 489.6 300 81.0
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 1.8e-136 489.6 303 81.2
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 2.3e-136 489.2 303 80.9
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 3.0e-136 488.8 303 79.9
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 3.9e-136 488.4 301 81.4
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 3.9e-136 488.4 300 81.0
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.1e-135 486.9 303 80.2
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 2.5e-135 485.7 303 79.2
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 9.7e-135 483.8 301 79.4
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.3e-134 483.4 301 80.4
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.3e-134 483.4 303 79.5
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 2.2e-134 482.6 301 80.1
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.7e-134 481.9 303 79.2
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 3.7e-134 481.9 301 78.7
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 6.3e-134 481.1 303 80.2
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 1.1e-133 480.3 299 78.6
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 1.4e-133 479.9 303 78.2
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 3.1e-133 478.8 301 77.7
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 3.1e-133 478.8 301 78.7
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 1.5e-132 476.5 303 77.9
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 7.7e-132 474.2 303 77.9
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 6.5e-131 471.1 301 77.4
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.2e-130 468.4 295 77.3
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 2.1e-129 466.1 301 76.7
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 2.7e-129 465.7 303 75.2
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 5.1e-128 461.5 293 79.5
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 4.4e-127 458.4 305 77.7
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 1.7e-126 456.4 301 73.8
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 1.8e-125 453.0 306 75.2
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 3.1e-125 452.2 302 73.5
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 4.1e-125 451.8 306 75.2
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 5.3e-125 451.4 305 74.1
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 2.6e-124 449.1 303 73.9
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 4.5e-124 448.4 287 78.7
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 7.7e-124 447.6 303 73.3
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 8.5e-123 444.1 305 74.1
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 4.2e-122 441.8 300 72.7
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 7.2e-122 441.0 300 71.3
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 9.4e-122 440.7 300 72.3
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 2.1e-121 439.5 300 72.0
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 2.1e-121 439.5 300 72.7
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 2.1e-121 439.5 300 72.7
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 2.7e-121 439.1 300 72.0
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 3.6e-121 438.7 300 72.0
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 4.7e-121 438.3 300 70.7
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 3.0e-120 435.6 300 71.7
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 5.2e-120 434.9 304 71.7
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 8.8e-120 434.1 300 71.7
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 1.1e-119 433.7 300 72.0
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 2.0e-119 433.0 311 71.1
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 5.7e-119 431.4 300 71.0
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 9.7e-119 430.6 300 70.0
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 2.2e-118 429.5 300 69.7
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 2.2e-118 429.5 300 69.7
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 2.2e-118 429.5 300 69.7
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 3.7e-118 428.7 300 71.3
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 1.1e-117 427.2 304 71.7
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.2e-116 423.7 300 70.3
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.5e-114 416.0 303 70.3
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 5.5e-114 414.8 249 81.1
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 8.8e-112 407.5 249 79.5
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 2.7e-105 386.0 299 66.2
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.2e-102 376.3 300 64.3
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 1.4e-101 373.6 227 80.6
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.4e-101 372.9 230 80.4
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 3.1e-101 372.5 259 73.4
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 1.6e-100 370.2 235 77.9
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 2.7e-100 369.4 215 83.7
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.6e-97 360.1 225 76.9
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 6.1e-97 358.2 221 78.7
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 8.0e-97 357.8 305 59.0
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 2.7e-92 342.8 249 66.7
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 3.5e-92 342.4 255 66.3
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 7.8e-92 341.3 222 78.8
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 8.3e-86 321.2 277 58.1
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 3.9e-83 312.4 303 57.8
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 3.7e-78 295.8 339 48.4
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 4.7e-73 278.9 173 76.3
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 1.9e-58 230.3 316 42.4
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 4.6e-52 209.1 165 66.7
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 9.6e-50 201.4 163 62.0
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 4.2e-45 186.0 303 40.9
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 2.0e-39 167.2 345 35.1
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 2.4e-37 160.2 177 48.6
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 1.3e-35 154.5 105 74.3
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 1.0e-30 138.3 89 73.0
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.0e-30 138.3 88 72.7
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 3.9e-27 126.3 91 69.2
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 3.7e-25 119.8 86 73.3
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 5.0e-22 109.4 351 29.6
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 6.5e-22 109.0 72 68.1
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 6.5e-22 109.0 148 47.3
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 1.7e-17 94.4 64 76.6
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 9.1e-16 88.6 60 61.7
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 2.9e-14 83.6 46 82.6


User provided reference genes

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