Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 3.1e-256 887.9 425 100.0
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.3e-225 786.2 435 87.4
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 3.4e-210 734.9 435 83.0
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 1.3e-198 696.4 427 77.5
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 1.7e-190 669.5 427 74.5
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 2.1e-188 662.5 427 74.2
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 7.6e-186 654.1 426 72.3
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.9e-185 652.1 425 72.7
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.9e-185 652.1 425 72.9
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 3.2e-184 648.7 442 71.3
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 1.2e-183 646.7 442 71.0
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 3.5e-183 645.2 432 69.9
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 3.0e-182 642.1 454 68.7
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 6.6e-182 641.0 426 70.9
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 1.4e-179 633.3 426 70.7
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 4.5e-178 628.2 432 69.2
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 4.5e-178 628.2 427 69.6
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 4.9e-177 624.8 463 71.1
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 4.2e-176 621.7 427 69.6
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 1.3e-174 616.7 427 70.0
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 2.3e-174 615.9 416 70.2
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 1.5e-173 613.2 433 67.2
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 5.6e-173 611.3 425 67.5
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 6.2e-172 607.8 426 67.1
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 1.8e-171 606.3 427 67.4
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 2.4e-171 605.9 442 64.7
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 3.1e-171 605.5 427 67.4
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 5.3e-171 604.7 417 68.6
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 2.0e-170 602.8 427 67.2
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 3.4e-170 602.1 426 67.8
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 5.8e-170 601.3 434 66.4
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 2.2e-169 599.4 485 61.4
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 1.1e-168 597.0 426 66.0
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 1.4e-168 596.7 491 61.3
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 2.4e-168 595.9 425 65.2
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 7.1e-168 594.3 426 65.5
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 7.1e-168 594.3 426 65.5
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 9.3e-168 594.0 426 65.5
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.2e-167 593.6 425 65.2
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 3.5e-167 592.0 428 64.5
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 4.6e-167 591.7 432 65.7
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 1.3e-166 590.1 425 65.2
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 1.3e-166 590.1 435 65.1
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 2.3e-166 589.3 425 64.5
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 3.0e-166 589.0 426 65.0
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 3.0e-166 589.0 426 65.0
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 3.9e-166 588.6 425 64.2
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 1.1e-165 587.0 424 67.0
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 3.3e-165 585.5 428 64.7
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 9.6e-165 583.9 416 65.6
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 6.2e-164 581.3 425 65.4
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 6.2e-164 581.3 429 66.2
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 8.2e-164 580.9 465 61.3
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 6.9e-163 577.8 426 64.8
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 5.8e-162 574.7 434 62.7
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.3e-161 573.5 454 62.3
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.8e-161 572.0 427 62.8
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 1.1e-160 570.5 456 60.1
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 1.4e-160 570.1 426 64.1
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 1.4e-160 570.1 425 61.6
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 3.5e-159 565.5 426 62.9
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 1.1e-157 560.5 374 71.1
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 7.4e-157 557.8 430 62.6
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 6.3e-156 554.7 429 61.5
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 6.9e-155 551.2 416 63.7
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 1.7e-153 546.6 433 60.7
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 7.2e-152 541.2 425 60.5
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 1.6e-151 540.0 434 61.1
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 3.3e-149 532.3 424 59.4
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 9.7e-149 530.8 427 59.3
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 6.3e-148 528.1 424 59.0
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.4e-147 526.9 423 59.1
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 4.5e-146 521.9 446 58.1
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 3.8e-145 518.8 436 58.9
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 1.9e-144 516.5 426 59.4
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 3.6e-143 512.3 349 70.5
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.1e-139 500.7 431 57.3
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 8.5e-137 491.1 426 57.5
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 6.7e-134 481.5 431 55.9
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 4.1e-131 472.2 345 64.1
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 2.2e-129 466.5 386 58.0
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.9e-129 466.1 427 55.0
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.9e-129 466.1 427 55.0
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 3.6e-127 459.1 405 53.6
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.4e-123 447.2 349 62.5
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 7.2e-120 434.9 418 49.5
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 9.4e-120 434.5 336 61.3
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 8.3e-108 394.8 449 42.3
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 2.0e-106 390.2 427 44.5
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 1.3e-105 387.5 421 45.1
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 5.6e-104 382.1 497 41.9
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 2.6e-85 320.1 200 75.5
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 1.4e-83 314.3 252 59.9
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 5.4e-83 312.4 179 79.9
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 9.2e-83 311.6 386 42.2
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 5.2e-78 295.8 218 64.7
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 1.3e-76 291.2 186 71.0
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 3.9e-65 253.1 185 61.6
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 2.1e-63 247.3 186 59.7
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 1.1e-59 235.0 153 77.1
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 3.2e-59 233.4 153 76.5
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 5.4e-59 232.6 153 75.8
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 7.1e-59 232.3 153 76.5
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.2e-53 214.9 160 61.2
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 7.6e-53 212.2 135 79.3
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 5.5e-51 206.1 147 59.2
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.6e-45 187.2 124 70.2
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 6.5e-44 182.6 106 77.4
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.0e-41 175.3 126 65.1
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 6.7e-41 172.6 152 52.6
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 2.2e-39 167.5 91 86.8
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 4.8e-39 166.4 132 59.8
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 3.1e-38 163.7 117 65.0
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 1.7e-36 157.9 102 71.6
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 6.9e-30 136.0 76 80.3
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 1.5e-29 134.8 84 72.6
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 2.6e-29 134.0 88 70.5
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.9e-28 130.6 108 53.7
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 5.5e-27 126.3 90 64.4
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 2.0e-24 117.9 116 54.3
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 4.8e-23 113.2 81 55.6
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 5.3e-22 109.8 88 55.7
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 1.0e-20 105.5 61 73.8
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 2.9e-20 104.0 59 74.6
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 4.4e-16 90.1 172 31.4
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 1.4e-14 85.1 83 49.4
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.6e-13 81.6 75 54.7
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 2.2e-12 77.8 56 67.9
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 8.5e-12 75.9 53 64.2
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 8.8e-09 65.9 105 39.0
BcaC05g25566 Brassica carinata HOM05D005601 ORTHO05D007265 2.6e-08 64.3 105 38.1
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 3.4e-08 63.9 105 38.1
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 1.3e-07 62.0 42 64.3
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.7e-07 61.6 37 64.9
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 2.2e-07 61.2 42 61.9
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 6.3e-07 59.7 42 61.9


User provided reference genes

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