Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 3.0e-85 318.9 221 100.0
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 4.4e-68 261.9 219 90.9
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 8.3e-51 204.5 221 80.1
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 5.4e-50 201.8 223 77.6
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 5.9e-49 198.4 227 70.9
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 5.9e-49 198.4 224 76.3
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 7.7e-49 198.0 222 75.2
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 6.1e-46 188.3 224 75.4
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 1.4e-45 187.2 221 71.0
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 4.0e-45 185.7 221 75.1
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 5.2e-45 185.3 221 73.8
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 6.8e-45 184.9 230 61.7
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 1.2e-44 184.1 237 70.5
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 2.0e-44 183.3 225 73.8
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 2.0e-44 183.3 228 73.7
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 3.4e-44 182.6 232 71.6
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 3.4e-44 182.6 221 70.1
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 4.4e-44 182.2 221 70.1
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 5.7e-44 181.8 168 90.5
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 1.3e-43 180.6 227 73.1
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 1.7e-43 180.3 224 73.2
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 2.8e-43 179.5 229 72.5
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 3.7e-43 179.1 213 70.4
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 4.9e-43 178.7 234 70.5
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 4.9e-43 178.7 224 70.5
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 6.3e-43 178.3 233 67.8
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 6.3e-43 178.3 221 69.2
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 1.4e-42 177.2 170 86.5
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 1.8e-42 176.8 229 69.9
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 2.4e-42 176.4 233 70.4
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 3.1e-42 176.0 223 72.2
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 4.1e-42 175.6 209 74.6
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 4.1e-42 175.6 225 71.1
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 4.1e-42 175.6 231 65.4
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 5.4e-42 175.3 205 75.6
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 5.4e-42 175.3 225 72.0
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 5.4e-42 175.3 231 68.4
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 7.0e-42 174.9 228 67.5
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 9.2e-42 174.5 223 71.7
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 1.2e-41 174.1 170 82.4
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 1.6e-41 173.7 226 71.7
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 2.0e-41 173.3 239 69.0
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 2.0e-41 173.3 168 88.1
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 2.7e-41 172.9 224 71.4
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 2.7e-41 172.9 227 70.0
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.5e-41 172.6 223 69.1
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 3.5e-41 172.6 178 83.7
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 4.5e-41 172.2 222 71.6
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 7.7e-41 171.4 201 76.6
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 7.7e-41 171.4 223 69.1
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.7e-40 170.2 223 68.6
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 3.8e-40 169.1 237 62.0
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 1.1e-39 167.5 208 73.6
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 1.1e-39 167.5 222 71.2
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 1.1e-39 167.5 228 59.6
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 1.5e-39 167.2 223 68.6
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 1.5e-39 167.2 168 81.5
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 5.6e-39 165.2 231 69.3
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 5.6e-39 165.2 227 64.8
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 7.3e-39 164.9 230 68.7
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 2.8e-38 162.9 228 71.1
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 1.4e-37 160.6 225 68.9
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 1.4e-37 160.6 182 79.1
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 1.8e-37 160.2 208 71.2
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 8.9e-37 157.9 244 50.8
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 2.0e-36 156.8 219 69.9
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 2.0e-36 156.8 234 67.9
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 4.4e-36 155.6 229 68.1
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 9.8e-36 154.5 169 79.9
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 1.3e-35 154.1 165 79.4
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 4.9e-35 152.1 224 63.8
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 4.9e-35 152.1 176 79.5
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 1.4e-34 150.6 222 63.1
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.5e-33 146.0 206 68.4
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 7.8e-33 144.8 208 67.3
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 7.8e-33 144.8 142 93.7
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 7.8e-33 144.8 170 77.1
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 1.0e-32 144.4 144 91.7
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 1.3e-32 144.1 202 67.3
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 3.0e-32 142.9 171 76.6
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 3.9e-32 142.5 217 68.7
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 8.0e-30 134.8 198 70.2
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 2.3e-29 133.3 209 64.1
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 6.8e-29 131.7 206 63.1
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 6.8e-29 131.7 206 63.1
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 6.8e-29 131.7 206 63.1
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 1.5e-28 130.6 166 72.9
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 5.8e-28 128.6 163 65.6
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 9.8e-28 127.9 226 57.5
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 1.1e-26 124.4 208 62.0
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 5.4e-26 122.1 171 63.2
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 7.0e-26 121.7 231 56.7
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 1.2e-25 120.9 228 57.5
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 1.6e-25 120.6 209 58.9
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 1.6e-25 120.6 231 57.6
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 2.7e-25 119.8 106 63.2
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 8.6e-24 114.8 126 94.4
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 1.9e-23 113.6 147 74.8
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 1.2e-22 110.9 170 67.6
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 1.2e-22 110.9 59 86.4
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 2.8e-22 109.8 115 58.3
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 4.7e-22 109.0 118 55.1
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 1.4e-21 107.5 112 55.4
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 4.0e-21 105.9 53 94.3
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 5.2e-21 105.5 184 65.2
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 6.0e-17 92.0 165 67.3
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 2.3e-16 90.1 55 80.0
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 6.2e-14 82.0 193 60.6
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 2.3e-13 80.1 38 92.1
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 3.1e-13 79.7 97 46.4
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 4.4e-12 75.9 60 65.0
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 4.4e-12 75.9 49 65.3
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 2.2e-11 73.6 38 89.5
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 6.0e-09 65.5 72 51.4
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 7.8e-09 65.1 37 81.1
Cre16.g687300 Chlamydomonas reinhardtii HOM05D006605 ORTHO05D008277 2.3e-08 63.5 59 54.2


User provided reference genes

Program Settings