Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 1.4e-153 546.2 262 100.0
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 1.2e-141 506.5 262 93.5
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 1.9e-110 402.9 262 73.7
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 1.7e-103 379.8 262 69.1
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 1.6e-98 363.2 260 68.5
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 3.7e-98 362.1 260 68.5
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 3.7e-98 362.1 260 68.5
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 4.8e-98 361.7 258 69.8
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 6.3e-98 361.3 258 69.8
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 3.4e-96 355.5 258 68.6
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 5.9e-96 354.8 260 65.4
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 3.6e-93 345.5 263 63.9
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 6.1e-93 344.7 263 66.2
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.1e-93 344.7 263 66.2
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.1e-93 344.7 263 66.5
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.0e-92 344.0 263 66.2
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.8e-92 343.2 263 65.8
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 5.7e-91 338.2 263 65.4
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 5.7e-91 338.2 263 65.4
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 5.7e-91 338.2 261 64.8
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 9.7e-91 337.4 263 62.7
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 1.3e-90 337.0 264 64.0
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 6.3e-90 334.7 263 63.9
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 9.1e-89 330.9 263 61.6
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 5.9e-88 328.2 264 58.3
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 5.9e-88 328.2 260 60.4
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 2.9e-87 325.9 263 62.0
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 3.8e-87 325.5 262 58.8
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 3.8e-87 325.5 263 61.6
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 6.5e-87 324.7 264 58.7
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 1.4e-86 323.6 262 59.9
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 2.5e-86 322.8 263 58.2
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 5.5e-86 321.6 263 60.8
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 9.4e-86 320.9 263 61.6
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 9.4e-86 320.9 259 61.0
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 3.6e-85 318.9 262 58.8
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 4.7e-85 318.5 263 60.1
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 1.0e-84 317.4 263 60.5
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 1.4e-84 317.0 259 58.7
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 3.9e-84 315.5 262 62.2
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 3.9e-84 315.5 257 63.4
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 3.3e-83 312.4 266 59.0
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 5.7e-83 311.6 264 60.2
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 5.7e-83 311.6 263 58.6
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 5.7e-83 311.6 263 61.6
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 7.4e-83 311.2 260 59.6
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 7.4e-83 311.2 262 61.5
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 9.7e-83 310.8 257 58.8
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 1.3e-82 310.5 255 61.2
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 1.3e-82 310.5 263 60.1
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 2.2e-82 309.7 263 60.8
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 2.8e-82 309.3 257 63.0
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 3.7e-82 308.9 261 61.3
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 4.8e-82 308.5 260 59.2
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 4.8e-82 308.5 260 59.2
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 4.8e-82 308.5 260 59.2
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 1.1e-81 307.4 262 60.7
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 1.4e-81 307.0 263 57.8
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 3.1e-81 305.8 264 58.0
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 7.0e-81 304.7 258 60.9
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 2.0e-80 303.1 260 57.7
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 5.9e-80 301.6 260 56.9
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 7.7e-80 301.2 221 67.4
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.3e-79 300.4 264 56.8
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 5.0e-79 298.5 264 56.4
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 6.5e-79 298.1 262 57.6
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 3.2e-78 295.8 266 58.6
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 4.2e-78 295.4 263 55.9
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 5.5e-78 295.0 263 55.1
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 9.4e-78 294.3 264 58.3
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 9.4e-78 294.3 265 56.2
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 1.2e-77 293.9 263 55.9
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 2.7e-77 292.7 266 56.4
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 6.1e-77 291.6 263 55.5
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 8.0e-77 291.2 266 56.0
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 1.8e-76 290.0 266 58.6
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 1.1e-75 287.3 263 55.5
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 2.6e-75 286.2 265 56.6
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 4.4e-75 285.4 257 56.8
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 1.3e-74 283.9 271 55.7
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 1.4e-73 280.4 215 64.7
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 1.4e-73 280.4 257 53.3
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 7.7e-72 274.6 260 52.7
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 7.7e-72 274.6 317 48.9
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 1.5e-70 270.4 234 57.7
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 2.3e-68 263.1 257 49.4
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 3.0e-68 262.7 256 50.8
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 6.8e-68 261.5 229 59.8
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 2.6e-67 259.6 223 58.3
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 9.1e-65 251.1 228 56.6
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 9.1e-65 251.1 266 50.4
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 2.9e-63 246.1 190 63.2
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 1.8e-60 236.9 262 48.5
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 2.3e-60 236.5 263 48.3
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 2.3e-60 236.5 222 55.9
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 6.8e-60 235.0 164 68.3
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 2.4e-57 226.5 260 47.3
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 4.5e-56 222.2 253 46.2
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 3.8e-55 219.2 256 47.7
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 8.6e-55 218.0 164 64.0
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 2.3e-47 193.4 153 60.8
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 1.9e-46 190.3 158 56.3
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 1.9e-46 190.3 158 56.3
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 1.9e-46 190.3 158 56.3
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 2.5e-46 189.9 184 55.4
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 3.2e-41 172.9 154 53.2
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 7.8e-40 168.3 253 39.1
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 7.8e-40 168.3 159 50.3
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 6.2e-37 158.7 149 53.7
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 2.2e-34 150.2 279 33.3
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 6.4e-34 148.7 116 57.8
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 3.0e-31 139.8 124 50.0
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 1.5e-30 137.5 232 34.9
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 1.5e-30 137.5 220 36.4
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 1.9e-30 137.1 168 49.4
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 4.3e-30 136.0 109 60.6
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 5.6e-30 135.6 165 49.7
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 3.4e-27 126.3 106 59.4
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 1.4e-25 120.9 106 58.5
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 1.2e-21 107.8 81 63.0
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 6.2e-21 105.5 77 66.2
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 9.9e-19 98.2 84 53.6
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 1.1e-17 94.7 171 35.1
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 1.4e-17 94.4 94 50.0
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 4.6e-16 89.4 81 61.7
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 3.6e-13 79.7 48 75.0
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 6.2e-13 79.0 67 55.2
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 4.0e-12 76.3 157 32.5
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 1.3e-10 71.2 93 44.1
HanXRQChr12g0360941 Helianthus annuus HOM05D005673 ORTHO05D007081 5.6e-06 55.8 44 56.8
MD01G1114600 Malus domestica HOM05D005673 ORTHO05D007081 7.3e-06 55.5 59 52.5


User provided reference genes

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