Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 5.4e-141 504.2 238 100.0
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 2.2e-134 482.3 236 94.9
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 6.7e-107 391.0 235 74.5
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 6.1e-100 367.9 234 70.9
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 2.0e-98 362.8 235 70.2
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 1.3e-97 360.1 235 70.2
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 4.8e-97 358.2 235 68.1
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 8.2e-97 357.5 236 69.1
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 1.1e-96 357.1 237 68.8
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 2.4e-96 355.9 235 69.4
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 1.2e-95 353.6 234 67.9
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 7.7e-95 350.9 235 68.9
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 7.7e-95 350.9 235 68.5
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 7.7e-95 350.9 234 68.8
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.3e-94 350.1 233 66.5
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 2.2e-94 349.4 233 66.5
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.1e-93 347.1 243 66.7
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 3.2e-93 345.5 234 67.1
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 1.2e-92 343.6 243 66.3
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 1.0e-91 340.5 232 66.8
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 5.2e-91 338.2 246 64.6
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 1.7e-89 333.2 234 63.7
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 2.2e-89 332.8 234 65.4
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 8.2e-89 330.9 233 63.9
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 8.2e-89 330.9 234 62.0
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 3.1e-88 328.9 235 65.5
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 5.3e-88 328.2 231 65.4
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 7.0e-88 327.8 234 62.8
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 7.0e-88 327.8 234 61.5
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 1.2e-87 327.0 234 63.2
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 2.6e-87 325.9 234 63.7
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 3.5e-87 325.5 241 60.6
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 5.9e-87 324.7 238 60.9
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 5.9e-87 324.7 238 60.9
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 1.7e-86 323.2 240 60.8
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 1.7e-86 323.2 240 60.8
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 1.7e-86 323.2 234 61.1
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 6.5e-86 321.2 235 62.6
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 8.5e-86 320.9 238 60.1
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 1.5e-85 320.1 234 63.2
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 7.2e-85 317.8 238 59.7
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 1.0e-83 313.9 238 59.7
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 1.8e-83 313.2 230 62.2
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 8.8e-83 310.8 233 60.5
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 5.7e-82 308.1 234 58.1
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 1.1e-80 303.9 230 60.4
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 9.1e-80 300.8 235 61.3
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 2.7e-79 299.3 243 58.4
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 4.5e-79 298.5 235 57.4
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 2.9e-78 295.8 236 60.2
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 5.5e-77 291.6 234 57.3
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 2.3e-75 286.2 224 53.6
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 3.0e-75 285.8 210 61.4
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 2.6e-74 282.7 234 58.1
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 3.4e-74 282.3 216 59.7
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 3.7e-73 278.9 233 54.1
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 6.3e-73 278.1 236 55.1
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 1.4e-72 276.9 234 54.3
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 5.4e-72 275.0 215 57.2
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 2.8e-68 262.7 229 50.2
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 3.0e-67 259.2 206 58.7
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 2.0e-66 256.5 266 50.4
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 1.7e-65 253.4 218 56.0
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 2.4e-64 249.6 229 48.9
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 3.8e-62 242.3 216 51.9
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 2.5e-53 213.0 228 47.8
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 9.5e-53 211.1 229 42.8
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 4.7e-52 208.8 232 41.4
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 1.3e-49 200.7 168 56.5
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 3.7e-49 199.1 230 39.6
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 6.4e-49 198.4 259 40.9
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 2.7e-47 193.0 146 59.6
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 8.6e-46 188.0 169 50.9
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 1.2e-42 177.6 168 51.8
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 1.5e-37 160.6 124 60.5
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 4.7e-36 155.6 108 66.7
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 9.3e-24 114.8 67 71.6
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 2.7e-23 113.2 260 29.6
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 5.6e-21 105.5 176 35.2
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 1.8e-19 100.5 82 59.8
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 1.0e-14 84.7 63 60.3
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 1.9e-08 63.9 93 38.7
MBI01_g18879_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 3.2e-08 63.2 61 49.2
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 2.1e-07 60.5 45 66.7


User provided reference genes

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