Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G277100 Populus trichocarpa HOM05D005859 ORTHO05D007576 3.6e-143 511.5 253 100.0
Sabra06G0214800 Salix brachista HOM05D005859 ORTHO05D007576 1.7e-140 502.7 253 98.0
Potri.018G003900 Populus trichocarpa HOM05D005859 ORTHO05D007576 4.7e-135 484.6 253 94.1
Sabra18G0009500 Salix brachista HOM05D005859 ORTHO05D007576 1.6e-130 469.5 253 92.1
Sabra18G0001700 Salix brachista HOM05D005859 ORTHO05D007576 3.5e-130 468.4 253 91.7
Atru.chr7.2673 Acer truncatum HOM05D005859 ORTHO05D007576 1.7e-129 466.1 251 89.6
Prupe.1G454800 Prunus persica HOM05D005859 ORTHO05D007576 5.1e-129 464.5 253 89.3
Ciclev10009277m.g Citrus clementina HOM05D005859 ORTHO05D007576 9.6e-128 460.3 251 88.0
RcHm_v2.0_Chr6g0305541 Rosa chinensis HOM05D005859 ORTHO05D007576 9.6e-128 460.3 253 87.7
Duzib151G0554 Durio zibethinus HOM05D005859 ORTHO05D007576 1.2e-127 459.9 251 87.6
MD08G1121000 Malus domestica HOM05D005859 ORTHO05D007576 1.6e-127 459.5 253 87.7
COL.COLO4_34684 Corchorus olitorius HOM05D005859 ORTHO05D007576 2.8e-127 458.8 251 87.3
Thecc.04G293600 Theobroma cacao HOM05D005859 ORTHO05D007576 3.6e-127 458.4 251 87.6
Haze_21816 Corylus avellana HOM05D005859 ORTHO05D007576 4.7e-127 458.0 253 87.7
Phvul.009G104500 Phaseolus vulgaris HOM05D005859 ORTHO05D007576 6.2e-127 457.6 251 89.2
QL12p026076 Quercus lobata HOM05D005859 ORTHO05D007576 6.2e-127 457.6 251 88.0
Manes.08G049200 Manihot esculenta HOM05D005859 ORTHO05D007576 8.1e-127 457.2 251 88.8
CANSAT64G2965 Cannabis sativa HOM05D005859 ORTHO05D007576 1.1e-126 456.8 253 87.4
VMungo1309G0784 Vigna mungo HOM05D005859 ORTHO05D007576 1.1e-126 456.8 251 88.4
FvH4_2g36340 Fragaria vesca HOM05D005859 ORTHO05D007576 1.4e-126 456.4 253 87.4
FAN15G0047 Fragaria x ananassa HOM05D005859 ORTHO05D007576 1.4e-126 456.4 253 87.4
Glyma.04G078700 Glycine max HOM05D005859 ORTHO05D007576 1.4e-126 456.4 251 88.8
Duzib151G0446 Durio zibethinus HOM05D005859 ORTHO05D007576 2.4e-126 455.7 251 87.3
FAN20G1422 Fragaria x ananassa HOM05D005859 ORTHO05D007576 2.4e-126 455.7 253 87.0
Cfa013324 Carpinus fangiana HOM05D005859 ORTHO05D007576 6.9e-126 454.1 251 87.3
Gohir.D09G062800 Gossypium hirsutum HOM05D005859 ORTHO05D007576 1.2e-125 453.4 251 86.9
MELO3C011163.2 Cucumis melo HOM05D005859 ORTHO05D007576 2.0e-125 452.6 249 88.4
Cpa.g.sc10.203 Carica papaya HOM05D005859 ORTHO05D007576 3.4e-125 451.8 253 88.1
Dinv07263 Davidia involucrata HOM05D005859 ORTHO05D007576 3.4e-125 451.8 253 86.6
CiPaw.07G208600 Carya illinoinensis HOM05D005859 ORTHO05D007576 4.4e-125 451.4 253 86.6
Lj1g0020437 Lotus japonicus HOM05D005859 ORTHO05D007576 5.8e-125 451.1 251 87.3
Gorai.006G077600 Gossypium raimondii HOM05D005859 ORTHO05D007576 9.9e-125 450.3 251 86.5
Glyma.06G080300 Glycine max HOM05D005859 ORTHO05D007576 1.3e-124 449.9 251 87.3
Actinidia22411 Actinidia chinensis HOM05D005859 ORTHO05D007576 1.7e-124 449.5 253 86.2
ClCG08G012440 Citrullus lanatus HOM05D005859 ORTHO05D007576 1.7e-124 449.5 249 87.6
TWI63G1176 Tripterygium wilfordii HOM05D005859 ORTHO05D007576 1.7e-124 449.5 251 85.7
Ca_15630_v3 Cicer arietinum L. HOM05D005859 ORTHO05D007576 2.9e-124 448.7 251 86.9
CsaV3_2G031130 Cucumis sativus L. HOM05D005859 ORTHO05D007576 3.8e-124 448.4 249 87.1
Sed0013908 Sechium edule HOM05D005859 ORTHO05D007576 6.4e-124 447.6 249 87.1
Gohir.A09G063900 Gossypium hirsutum HOM05D005859 ORTHO05D007576 3.2e-123 445.3 248 86.3
Medtr3g109360 Medicago truncatula HOM05D005859 ORTHO05D007576 3.2e-123 445.3 251 86.5
CSS0019957 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 4.2e-123 444.9 253 85.8
Ah.07g199340 Amaranthus hybridus HOM05D005859 ORTHO05D007576 5.4e-123 444.5 253 84.2
Sc10g0009100 Simmondsia chinensis HOM05D005859 ORTHO05D007576 5.4e-123 444.5 249 85.1
TPR.G1368 Trifolium pratense HOM05D005859 ORTHO05D007576 5.4e-123 444.5 251 86.1
Eucgr.A02021 Eucalyptus grandis HOM05D005859 ORTHO05D007576 2.1e-122 442.6 253 83.8
Rhsim02G0125100 Rhododendron simsii HOM05D005859 ORTHO05D007576 7.8e-122 440.7 251 85.3
Sed0022456 Sechium edule HOM05D005859 ORTHO05D007576 7.8e-122 440.7 249 85.9
Rhsim05G0088100 Rhododendron simsii HOM05D005859 ORTHO05D007576 1.3e-121 439.9 253 84.6
Psat5g022960 Pisum sativum HOM05D005859 ORTHO05D007576 1.7e-121 439.5 249 83.9
PGR042G0112 Punica granatum HOM05D005859 ORTHO05D007576 3.9e-121 438.3 251 82.9
AUR62007184 Chenopodium quinoa HOM05D005859 ORTHO05D007576 6.6e-121 437.6 251 83.7
CSS0037116 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 8.7e-121 437.2 251 84.9
THA.LOC104814931 Tarenaya hassleriana HOM05D005859 ORTHO05D007576 1.9e-120 436.0 249 84.3
Lalb_Chr11g0064301 Lupinus albus HOM05D005859 ORTHO05D007576 2.5e-120 435.6 251 85.3
CSS0002423 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 5.6e-120 434.5 251 84.5
ECA238G0328 Erigeron canadensis HOM05D005859 ORTHO05D007576 1.1e-118 430.3 250 82.8
TAR625G0738 Trochodendron aralioides HOM05D005859 ORTHO05D007576 1.1e-118 430.3 263 80.6
Nn2g12765 Nelumbo nucifera HOM05D005859 ORTHO05D007576 4.0e-118 428.3 258 80.2
EL10Ac5g12246 Beta vulgaris HOM05D005859 ORTHO05D007576 1.5e-117 426.4 247 83.0
DCAR_010833 Daucus carota HOM05D005859 ORTHO05D007576 1.5e-117 426.4 250 84.0
Oeu056039.1 Olea europaea HOM05D005859 ORTHO05D007576 5.8e-117 424.5 252 81.3
MSTRG.12122 Avicennia marina HOM05D005859 ORTHO05D007576 7.6e-117 424.1 251 83.7
Lsat_1_v5_gn_5_41801 Lactuca sativa HOM05D005859 ORTHO05D007576 4.9e-116 421.4 247 83.0
Cc09_g05860 Coffea canephora HOM05D005859 ORTHO05D007576 1.1e-115 420.2 245 83.3
Nitab4.5_0003379g0070 Nicotiana tabacum HOM05D005859 ORTHO05D007576 1.9e-115 419.5 250 82.8
Nitab4.5_0006282g0050 Nicotiana tabacum HOM05D005859 ORTHO05D007576 2.4e-115 419.1 250 83.2
A06p35610 Brassica napus HOM05D005859 ORTHO05D007576 7.1e-115 417.5 250 80.8
BolC7t44822H Brassica oleracea HOM05D005859 ORTHO05D008158 9.3e-115 417.2 250 80.8
CAN.G149.19 Capsicum annuum HOM05D005859 ORTHO05D007576 9.3e-115 417.2 243 83.5
C07p42930 Brassica napus HOM05D005859 ORTHO05D008158 1.6e-114 416.4 250 80.8
Thhalv10004821m.g Eutrema salsugineum HOM05D005859 ORTHO05D007576 3.5e-114 415.2 249 79.1
CARHR188610 Cardamine hirsuta HOM05D005859 ORTHO05D007576 4.6e-114 414.8 249 79.1
Migut.A01131 Erythranthe guttata HOM05D005859 ORTHO05D007576 6.0e-114 414.5 253 81.0
AL6G36490 Arabidopsis lyrata HOM05D005859 ORTHO05D007576 1.0e-113 413.7 250 80.0
AT5G24840 Arabidopsis thaliana HOM05D005859 ORTHO05D007576 1.0e-113 413.7 250 80.8
Aqoxy7G02813 Aquilegia oxysepala HOM05D005859 ORTHO05D007576 1.3e-113 413.3 267 77.5
SalBow1G3786 Salvia bowleyana HOM05D005859 ORTHO05D007576 1.8e-113 412.9 253 81.0
Aa31LG11G4050 Aethionema arabicum HOM05D005859 ORTHO05D007576 3.9e-113 411.8 247 81.4
Sp2g22610 Schrenkiella parvula HOM05D005859 ORTHO05D007576 5.1e-113 411.4 249 79.1
PGSC0003DMG400010428 Solanum tuberosum HOM05D005859 ORTHO05D007576 5.1e-113 411.4 243 82.7
Carub.0006s2269 Capsella rubella HOM05D005859 ORTHO05D007576 1.1e-112 410.2 242 81.4
CSS0022235 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 4.3e-112 408.3 253 79.1
Solyc02g068650.2 Solanum lycopersicum HOM05D005859 ORTHO05D007576 1.6e-111 406.4 242 82.2
Sopen02g017820 Solanum pennellii HOM05D005859 ORTHO05D007576 1.1e-110 403.7 243 81.5
SGA_v2.0_scaffold104G30176 Striga asiatica HOM05D005859 ORTHO05D007576 1.4e-110 403.3 245 79.6
BcaB04g19801 Brassica carinata HOM05D005859 ORTHO05D007576 5.3e-110 401.4 249 77.5
PSO063G7086 Papaver somniferum HOM05D005859 ORTHO05D007576 5.3e-110 401.4 263 75.7
HPP92_010546 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.2e-109 400.2 244 78.7
MBI07_g41262_MAGBIO Magnolia biondii HOM05D005859 ORTHO05D007576 2.2e-108 396.0 248 77.4
Peaxi162Scf00149g00014 Petunia axillaris HOM05D005859 ORTHO05D007576 8.4e-108 394.0 247 79.8
BcaC04g23549 Brassica carinata HOM05D005859 ORTHO05D007576 1.4e-107 393.3 250 76.4
MD15G1100000 Malus domestica HOM05D005859 ORTHO05D007576 4.6e-106 388.3 241 80.9
HPP92_010527 Vanilla planifolia HOM05D005859 ORTHO05D007576 4.6e-106 388.3 239 78.2
Zm00001eb208790 Zea mays HOM05D005859 ORTHO05D007576 6.7e-105 384.4 239 77.4
unitig_21.g20313 Utricularia gibba HOM05D005859 ORTHO05D007576 7.4e-104 380.9 240 77.5
AUR62018819 Chenopodium quinoa HOM05D005859 ORTHO05D007576 5.1e-97 358.2 251 71.7
ATR0697G154 Amborella trichopoda HOM05D005859 ORTHO05D007576 1.5e-96 356.7 243 72.4
SEGI_16955 Sequoiadendron giganteum HOM05D005859 ORTHO05D007576 1.9e-96 356.3 271 64.6
CSS0005155 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 5.3e-94 348.2 254 71.3
Pp3c24_9600 Physcomitrium patens HOM05D005859 ORTHO05D007576 5.3e-94 348.2 249 67.5
CSS0033509 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 1.5e-93 346.7 201 81.6
Mapoly0026s0057 Marchantia polymorpha HOM05D005859 ORTHO05D007576 1.7e-92 343.2 269 63.6
SMO358G0125 Selaginella moellendorffii HOM05D005859 ORTHO05D007576 1.9e-91 339.7 238 68.5
AagrBONN_evm.TU.Sc2ySwM_344.1368 Anthoceros agrestis HOM05D005859 ORTHO05D007576 1.8e-89 333.2 257 64.2
CBR_g63067 Chara braunii HOM05D005859 ORTHO05D007576 3.0e-89 332.4 267 61.0
HanXRQChr14g0440281 Helianthus annuus HOM05D005859 ORTHO05D007576 5.1e-89 331.6 191 83.2
GSVIVG01035552001 Vitis vinifera HOM05D005859 ORTHO05D007576 2.6e-85 319.3 243 71.2
CSS0049229 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 9.4e-83 310.8 253 64.8
HPP92_010585 Vanilla planifolia HOM05D005859 ORTHO05D007576 3.0e-81 305.8 186 80.1
CSS0043283 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 5.1e-81 305.1 248 64.5
CDE05G2856 Ceratophyllum demersum HOM05D005859 ORTHO05D007576 1.3e-79 300.4 193 76.2
Cre07.g314550 Chlamydomonas reinhardtii HOM05D005859 ORTHO05D007576 3.7e-79 298.9 256 57.0
HanXRQChr07g0193381 Helianthus annuus HOM05D005859 ORTHO05D007576 2.9e-76 289.3 157 88.5
HanXRQChr09g0275211 Helianthus annuus HOM05D005859 ORTHO05D007576 9.4e-75 284.3 157 86.0
Lj2P347T15 Lonicera japonica HOM05D005859 ORTHO05D007576 1.6e-74 283.5 158 87.3
MCO01G481 Micromonas commoda HOM05D005859 ORTHO05D007576 6.3e-71 271.6 234 55.1
PRCOL_00003713 Prasinoderma coloniale HOM05D005859 ORTHO05D007576 1.0e-65 254.2 234 55.6
Dinv07265 Davidia involucrata HOM05D005859 ORTHO05D007576 3.1e-62 242.7 135 87.4
HPP92_010304 Vanilla planifolia HOM05D005859 ORTHO05D007576 2.5e-59 233.0 194 62.4
Haze_26141 Corylus avellana HOM05D005859 ORTHO05D007576 7.2e-59 231.5 233 48.9
CSS0012487 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 4.0e-57 225.7 248 51.2
BolC9t53628H Brassica oleracea HOM05D005859 ORTHO05D007576 2.9e-52 209.5 119 80.7
HPP92_010638 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.5e-51 207.2 120 80.0
CSS0016583 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 4.5e-45 185.7 120 75.0
HPP92_010538 Vanilla planifolia HOM05D005859 ORTHO05D007576 1.0e-44 184.5 105 81.0
CSS0020153 Camellia sinensis var. sinensis HOM05D005859 ORTHO05D007576 3.0e-41 172.9 96 85.4
BraA06t26486Z Brassica rapa HOM05D000880 ORTHO05D008158 4.0e-33 146.0 82 87.8
C09p07080 Brassica napus HOM05D000880 ORTHO05D008158 2.0e-32 143.7 85 82.4
Os06g0236900 Oryza sativa ssp. japonica HOM05D005859 ORTHO05D007576 1.7e-31 140.6 80 80.0
BolC9t53624H Brassica oleracea HOM05D000880 ORTHO05D008158 3.6e-18 96.3 56 83.9
A09p06390 Brassica napus HOM05D000880 ORTHO05D008158 2.4e-14 83.6 53 79.2
HPP92_010586 Vanilla planifolia HOM05D005859 ORTHO05D007576 9.2e-14 81.6 51 72.5
A09p06400 Brassica napus HOM05D005859 ORTHO05D007576 2.7e-13 80.1 48 75.0
ATR1096G015 Amborella trichopoda HOM05D005859 ORTHO05D007576 1.1e-11 74.7 54 61.1
AagrBONN_evm.TU.Sc2ySwM_117.3790 Anthoceros agrestis HOM05D005695 ORTHO05D007810 1.8e-09 67.4 178 27.0
Eucgr.D01073 Eucalyptus grandis HOM05D005695 ORTHO05D007810 2.4e-09 67.0 210 27.6
Pp3c18_9830 Physcomitrium patens HOM05D005695 ORTHO05D007810 9.0e-09 65.1 186 26.9
PSO782G5257 Papaver somniferum HOM05D005695 ORTHO05D007810 1.5e-08 64.3 215 27.9
HPP92_023786 Vanilla planifolia HOM05D005695 ORTHO05D007810 1.5e-08 64.3 182 30.8
MCO05G350 Micromonas commoda HOM05D005695 ORTHO05D007810 2.6e-08 63.5 192 26.0
Mapoly0006s0284 Marchantia polymorpha HOM05D005695 ORTHO05D007810 3.4e-08 63.2 231 23.4
CBR_g38752 Chara braunii HOM05D005695 ORTHO05D007810 4.4e-08 62.8 235 25.1
Nn7g37385 Nelumbo nucifera HOM05D005695 ORTHO05D007810 4.4e-08 62.8 182 29.7
SEGI_31772 Sequoiadendron giganteum HOM05D005695 ORTHO05D007810 4.4e-08 62.8 171 30.4
SMO351G0486 Selaginella moellendorffii HOM05D005695 ORTHO05D007810 7.6e-08 62.0 185 29.2
PSO063G4708 Papaver somniferum HOM05D005695 ORTHO05D007810 1.3e-07 61.2 215 27.0
ATR0568G060 Amborella trichopoda HOM05D005695 ORTHO05D007810 2.2e-07 60.5 194 28.9
Glyma.07G122300 Glycine max HOM05D005695 ORTHO05D007810 2.9e-07 60.1 175 29.7
Zm00001eb004570 Zea mays HOM05D005695 ORTHO05D007810 2.9e-07 60.1 239 26.4
Aqoxy3G02210 Aquilegia oxysepala HOM05D005695 ORTHO05D007810 4.9e-07 59.3 183 31.7
ClCG05G002480 Citrullus lanatus HOM05D005695 ORTHO05D007810 4.9e-07 59.3 176 29.5
Ciclev10032172m.g Citrus clementina HOM05D005695 ORTHO05D007810 4.9e-07 59.3 173 31.8
Cc05_g03930 Coffea canephora HOM05D005695 ORTHO05D007810 8.4e-07 58.5 161 30.4
CsaV3_3G009910 Cucumis sativus L. HOM05D005695 ORTHO05D007810 8.4e-07 58.5 176 29.5
TAR715G0002 Trochodendron aralioides HOM05D005695 ORTHO05D007810 8.4e-07 58.5 172 29.1
Sc23g0004120 Simmondsia chinensis HOM05D005695 ORTHO05D007810 1.1e-06 58.2 171 30.4
Glyma.03G100600 Glycine max HOM05D005695 ORTHO05D007810 1.4e-06 57.8 175 29.1
unitig_22.g5902 Utricularia gibba HOM05D005695 ORTHO05D007810 1.4e-06 57.8 131 30.5
Cre04.g213500 Chlamydomonas reinhardtii HOM05D005695 ORTHO05D007810 1.9e-06 57.4 133 30.1
Hma1.2p1_0128F.1_g060080 Hydrangea macrophylla HOM05D005695 ORTHO05D007810 1.9e-06 57.4 149 30.2
CANSAT54G1451 Cannabis sativa HOM05D005695 ORTHO05D007810 3.2e-06 56.6 171 28.7
COL.COLO4_21416 Corchorus olitorius HOM05D005695 ORTHO05D007810 3.2e-06 56.6 203 27.1
Lj3g0016519 Lotus japonicus HOM05D005695 ORTHO05D007810 3.2e-06 56.6 236 26.3
Pp3c19_7240 Physcomitrium patens HOM05D005695 ORTHO05D007810 3.2e-06 56.6 238 24.8
CiPaw.02G047100 Carya illinoinensis HOM05D005695 ORTHO05D007810 4.2e-06 56.2 179 30.7
Os01g0535900 Oryza sativa ssp. japonica HOM05D005695 ORTHO05D007810 4.2e-06 56.2 182 29.7
Potri.013G070800 Populus trichocarpa HOM05D005695 ORTHO05D007810 4.2e-06 56.2 200 28.0
Gohir.A11G224224 Gossypium hirsutum HOM05D005695 ORTHO05D007810 5.4e-06 55.8 177 27.7
Gorai.007G250100 Gossypium raimondii HOM05D005695 ORTHO05D007810 5.4e-06 55.8 177 28.2
HanXRQChr04g0117691 Helianthus annuus HOM05D005695 ORTHO05D007810 7.1e-06 55.5 181 28.2
PGR083G0136 Punica granatum HOM05D005695 ORTHO05D007810 9.3e-06 55.1 124 32.3
Solyc01g081460.3 Solanum lycopersicum HOM05D005695 ORTHO05D007810 9.3e-06 55.1 152 28.3
TPR.G17373 Trifolium pratense HOM05D005695 ORTHO05D007810 9.3e-06 55.1 133 30.1


User provided reference genes

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