Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 0.0e+00 1183.7 612 100.0
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 0.0e+00 1100.5 612 91.0
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 7.7e-216 754.2 593 64.4
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 8.3e-202 707.6 602 59.8
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 4.6e-200 701.8 660 57.9
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 5.0e-199 698.4 594 59.8
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 6.6e-199 698.0 593 61.7
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 2.8e-197 692.6 597 60.3
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 3.4e-195 685.6 596 59.9
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 8.3e-194 681.0 590 61.0
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 1.1e-193 680.6 598 58.9
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 1.1e-190 670.6 596 59.4
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 1.2e-189 667.2 617 56.9
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 1.9e-185 653.3 585 59.5
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 4.1e-185 652.1 587 55.4
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 2.3e-183 646.4 599 58.4
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 1.1e-182 644.0 581 57.8
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 2.1e-181 639.8 596 56.9
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 1.4e-180 637.1 592 54.6
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 8.9e-180 634.4 591 55.7
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 1.4e-177 627.1 589 55.3
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 7.1e-177 624.8 595 53.6
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 9.3e-177 624.4 594 56.4
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 1.6e-176 623.6 589 55.2
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 4.6e-176 622.1 588 55.4
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 2.5e-174 616.3 605 54.4
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 7.3e-174 614.8 600 55.2
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.1e-173 613.2 596 54.5
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 2.6e-171 606.3 591 53.8
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 3.4e-171 605.9 614 51.6
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 5.8e-171 605.1 643 50.1
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 7.6e-171 604.7 591 53.6
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 1.7e-170 603.6 649 51.6
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 2.9e-170 602.8 584 53.9
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 3.8e-170 602.4 610 51.6
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 4.9e-170 602.1 588 54.8
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 1.4e-169 600.5 610 51.3
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 1.4e-169 600.5 588 54.3
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.9e-169 600.1 594 51.5
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 5.4e-169 598.6 596 53.5
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 3.3e-166 589.3 590 51.7
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 5.6e-166 588.6 576 52.8
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 3.7e-165 585.9 590 50.8
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 6.2e-165 585.1 550 56.0
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 2.4e-164 583.2 565 55.2
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 2.4e-164 583.2 590 51.2
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 4.0e-164 582.4 595 50.4
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 4.9e-162 575.5 653 47.0
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 4.2e-161 572.4 589 53.5
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 2.7e-160 569.7 592 51.7
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 4.6e-160 568.9 592 49.5
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 9.6e-158 561.2 636 47.8
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 1.3e-157 560.8 613 49.1
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 6.9e-156 555.1 587 48.4
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 3.4e-155 552.7 595 51.4
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.9e-150 537.0 602 48.0
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 2.8e-149 533.1 598 48.5
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 4.5e-147 525.8 591 48.6
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 2.2e-146 523.5 594 47.6
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 5.0e-146 522.3 591 49.6
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 1.9e-145 520.4 597 48.7
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 3.2e-145 519.6 594 48.3
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 5.5e-145 518.8 570 49.3
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 4.6e-144 515.8 599 46.2
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 1.6e-141 507.3 594 47.3
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 2.2e-141 506.9 595 48.6
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 1.5e-139 500.7 579 48.7
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 2.0e-139 500.4 524 51.5
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 4.5e-139 499.2 600 44.3
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 1.3e-138 497.7 592 46.6
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 2.1e-136 490.3 475 52.8
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 1.5e-134 484.2 593 46.4
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.3e-133 481.1 524 48.5
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 2.0e-131 473.8 606 44.7
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 3.8e-130 469.5 607 44.3
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 1.9e-129 467.2 609 44.5
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 4.7e-128 462.6 641 42.4
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 1.1e-124 451.4 607 43.2
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 4.1e-124 449.5 493 49.3
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 2.6e-123 446.8 505 49.3
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 7.7e-123 445.3 520 47.3
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 1.0e-119 434.9 598 40.5
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 6.7e-119 432.2 606 42.1
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 2.0e-118 430.6 593 40.3
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.1e-116 424.9 375 58.4
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 1.4e-116 424.5 414 53.1
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.2e-115 421.4 375 57.6
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 2.0e-115 420.6 411 52.8
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 1.5e-113 414.5 598 42.3
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 4.2e-113 412.9 582 42.4
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.7e-112 410.2 375 56.8
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 2.9e-106 390.2 387 52.2
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 4.2e-105 386.3 641 37.3
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 8.9e-103 378.6 375 53.3
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 3.5e-99 366.7 625 37.4
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 1.9e-97 360.9 334 55.4
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.0e-90 338.6 589 37.2
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 3.3e-89 333.6 555 37.5
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 1.0e-82 312.0 460 38.0
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 3.4e-70 270.4 275 53.1
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 3.3e-65 253.8 300 45.3
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.2e-59 235.3 456 36.0
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 2.9e-45 187.6 587 29.1
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 1.9e-41 174.9 168 52.4
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 1.6e-40 171.8 261 36.4
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 2.0e-38 164.9 512 27.5
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 2.2e-37 161.4 633 24.5
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 7.1e-36 156.4 283 37.1
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 1.2e-35 155.6 623 24.9
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 7.4e-33 146.4 558 25.6
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 1.2e-30 139.0 131 53.4
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 2.0e-30 138.3 87 71.3
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 7.4e-25 119.8 165 41.2
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 6.3e-16 90.1 103 49.5
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 9.1e-15 86.3 96 46.9
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 7.7e-14 83.2 128 43.8
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 2.9e-13 81.3 250 26.4
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.0e-10 72.8 63 54.0
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 8.8e-10 69.7 62 53.2
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.0e-09 68.6 68 48.5
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 7.4e-09 66.6 63 50.8
Medtr1g013010 Medicago truncatula HOM05D006351 ORTHO05D007796 2.4e-07 61.6 66 51.5
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 5.3e-07 60.5 51 56.9


User provided reference genes

Program Settings