Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 1.7e-164 582.8 341 100.0
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 4.4e-144 515.0 341 90.3
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 2.1e-85 320.1 360 63.9
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 1.8e-84 317.0 349 57.3
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 5.7e-83 312.0 346 64.2
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 9.0e-81 304.7 338 54.4
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 6.5e-79 298.5 348 60.6
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 5.5e-78 295.4 301 60.8
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 9.4e-78 294.7 347 62.0
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 2.0e-75 287.0 271 62.0
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 3.7e-74 282.7 276 58.3
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 1.1e-73 281.2 315 57.5
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 2.0e-72 276.9 355 58.9
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 2.0e-72 276.9 355 58.9
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 1.3e-71 274.2 353 56.7
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 1.6e-69 267.3 277 59.9
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 2.1e-69 266.9 357 58.0
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 2.1e-69 266.9 272 61.8
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 3.6e-69 266.2 346 52.3
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 4.7e-69 265.8 331 53.5
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.3e-68 263.5 323 52.9
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.3e-68 263.5 322 52.5
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 3.9e-68 262.7 350 50.6
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 5.2e-68 262.3 283 58.0
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 6.7e-68 261.9 283 57.2
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 6.7e-68 261.9 352 51.4
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 8.8e-68 261.5 267 55.8
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 1.1e-67 261.2 336 52.4
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.0e-67 260.4 348 49.7
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 2.6e-67 260.0 273 56.4
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 2.6e-67 260.0 273 57.1
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 3.3e-67 259.6 337 54.0
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 7.4e-67 258.5 280 54.6
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 1.3e-66 257.7 352 55.1
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 1.3e-66 257.7 272 58.5
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 1.7e-66 257.3 268 59.7
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 1.7e-66 257.3 356 52.0
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 2.8e-66 256.5 274 55.8
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 8.2e-66 255.0 283 59.4
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 1.1e-65 254.6 357 50.1
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 1.8e-65 253.8 323 52.0
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 4.1e-65 252.7 375 53.6
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 5.3e-65 252.3 345 50.4
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 7.0e-65 251.9 276 58.0
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 9.1e-65 251.5 261 54.4
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 1.6e-64 250.8 271 53.1
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 2.6e-64 250.0 297 55.9
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 3.5e-64 249.6 269 58.7
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.7e-63 247.3 273 58.2
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 2.2e-63 246.9 266 54.9
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 2.9e-63 246.5 282 57.4
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 6.5e-63 245.4 294 51.7
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 1.9e-62 243.8 358 47.2
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 1.9e-62 243.8 276 58.3
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 3.2e-62 243.0 297 49.5
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 3.2e-62 243.0 310 57.1
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 4.2e-62 242.7 358 54.5
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 4.2e-62 242.7 388 51.0
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 5.5e-62 242.3 306 48.0
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 1.2e-61 241.1 354 51.4
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 1.6e-61 240.7 323 49.2
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 2.7e-61 240.0 350 50.6
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 4.7e-61 239.2 275 52.7
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 1.0e-60 238.0 287 54.0
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 3.0e-60 236.5 264 58.0
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 3.0e-60 236.5 382 46.6
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 6.7e-60 235.3 319 54.2
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 2.0e-59 233.8 342 51.8
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 2.6e-59 233.4 256 51.6
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 3.3e-59 233.0 264 57.2
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 3.3e-59 233.0 343 53.6
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 5.7e-59 232.3 263 55.9
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 7.5e-59 231.9 361 52.4
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 7.5e-59 231.9 263 55.5
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 9.7e-59 231.5 265 57.0
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 9.7e-59 231.5 258 58.1
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 1.7e-58 230.7 267 56.2
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 4.8e-58 229.2 343 46.9
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 8.2e-58 228.4 342 48.2
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 1.1e-57 228.0 335 48.1
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 1.8e-57 227.3 357 49.6
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 9.1e-57 224.9 335 48.1
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 1.2e-56 224.6 350 51.1
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 2.0e-56 223.8 301 58.1
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 5.9e-56 222.2 350 50.0
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 1.0e-55 221.5 356 51.4
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 2.5e-54 216.9 335 45.1
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 1.2e-53 214.5 228 51.3
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 1.2e-53 214.5 276 49.3
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 2.1e-53 213.8 274 50.0
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 2.1e-53 213.8 257 51.4
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 4.7e-53 212.6 301 48.5
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 1.0e-52 211.5 345 45.5
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.8e-52 210.7 255 52.9
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 1.3e-50 204.5 276 45.7
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 7.0e-49 198.7 334 53.3
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 4.5e-48 196.1 154 68.2
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 9.5e-46 188.3 312 46.5
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 1.2e-43 181.4 165 60.6
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 5.4e-41 172.6 236 50.8
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 9.2e-41 171.8 150 65.3
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 2.8e-37 160.2 126 69.0
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 2.0e-27 127.5 325 34.5
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 4.4e-27 126.3 276 35.5
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 5.8e-27 125.9 272 37.1
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 4.1e-25 119.8 275 38.9
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 1.5e-22 111.3 114 52.6
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 8.6e-15 85.5 236 34.7
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 4.3e-14 83.2 55 70.9
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 6.2e-13 79.3 140 52.9
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 8.9e-12 75.5 45 73.3
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 2.0e-11 74.3 183 34.4
C09p65600 Brassica napus HOM05D000552 ORTHO05D003270 8.4e-10 68.9 169 46.2
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 1.1e-09 68.6 89 40.4
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 9.2e-09 65.5 143 32.9
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 1.7e-07 61.2 85 44.7


User provided reference genes

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