Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G182801 Populus trichocarpa HOM05D000002 ORTHO05D000001 1.9e-65 252.3 124 100.0
TAR491G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.0e-15 84.3 86 48.8
TAR470G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.3e-13 80.1 90 46.7
TAR710G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.9e-12 76.3 85 47.1
TAR451G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.5e-12 75.9 86 43.0
SHI35369 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-12 75.5 79 43.0
Sopen05g019080 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-11 72.0 84 42.9
TAR687G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 6.1e-11 71.2 83 44.6
RcHm_v2.0_Chr2g0143411 Rosa chinensis HOM05D000002 ORTHO05D000001 8.0e-11 70.9 85 43.5
RcHm_v2.0_Chr3g0448581 Rosa chinensis HOM05D000015 ORTHO05D000734 8.0e-11 70.9 85 43.5
Sopen02g015640 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-10 70.5 84 41.7
Sopen01g007390 Solanum pennellii HOM05D000004 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen01g028280 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen02g014940 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen04g006060 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen04g027340 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen05g028580 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen06g003350 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen06g004200 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen06g004530 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen06g011320 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen06g015850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen06g022150 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen06g024630 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen08g004660 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen09g006820 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen09g007410 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen09g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen09g011980 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen09g032750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen10g024120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen11g019960 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen12g004240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen12g019360 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
Sopen12g019380 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-10 70.1 84 41.7
TAR540G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.8e-10 69.7 85 41.2
Sopen10g022510 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-10 69.3 84 41.7
Sopen10g023500 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-10 69.3 84 41.7
Sopen03g009200 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-10 68.9 87 41.4
Sopen11g018860 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-10 68.9 87 41.4
TAR416G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.0e-10 68.9 85 40.0
Sopen03g023600 Solanum pennellii HOM05D000002 ORTHO05D000001 4.0e-10 68.6 84 40.5
Sopen12g025240 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-10 68.2 84 39.3
Sopen04g031680 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-09 67.0 84 39.3
Sopen06g032140 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-09 67.0 83 41.0
Gorai.008G089200 Gossypium raimondii HOM05D000002 ORTHO05D000001 1.5e-09 66.6 101 32.7
Sopen06g016770 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-09 66.6 84 40.5
Sopen08g020030 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-09 66.2 84 40.5
Sopen10g024360 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-09 65.5 84 40.5
Thhalv10000715m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 4.4e-09 65.1 64 48.4
SEGI_30649 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 7.5e-09 64.3 84 34.5
Solyc08g061847.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 7.5e-09 64.3 91 38.5
Thhalv10000703m.g Eutrema salsugineum HOM05D000002 ORTHO05D000001 9.8e-09 63.9 65 44.6
Sopen08g017400 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-08 63.5 87 37.9
MD02G1245300 Malus domestica HOM05D001201 ORTHO05D001100 4.9e-08 61.6 68 41.2
Sopen02g015650 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-08 60.8 84 39.3
Sopen02g015660 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-08 60.8 67 43.3
TPR.G18411 Trifolium pratense HOM05D000002 ORTHO05D000001 8.3e-08 60.8 85 34.1
CiPaw.15G040700 Carya illinoinensis HOM05D000002 ORTHO05D000001 2.4e-07 59.3 99 32.3
MD15G1021000 Malus domestica HOM05D000247 ORTHO05D000288 2.4e-07 59.3 82 37.8
FvH4_4g33602 Fragaria vesca HOM05D000002 ORTHO05D000001 4.5e-06 55.1 94 33.0
FvH4_5g07492 Fragaria vesca HOM05D000002 ORTHO05D000001 4.5e-06 55.1 94 33.0
Lalb_Chr08g0237561 Lupinus albus HOM05D000002 ORTHO05D000001 7.7e-06 54.3 86 30.2
TAR439G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.7e-06 54.3 40 50.0


User provided reference genes

Program Settings