Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 3.1e-107 391.7 190 100.0
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 9.8e-93 343.6 221 78.7
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 1.4e-86 323.2 190 81.1
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 4.4e-85 318.2 190 77.4
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 3.7e-84 315.1 189 78.3
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 1.1e-83 313.5 190 76.8
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 1.1e-83 313.5 190 78.9
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.4e-83 313.2 190 75.3
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 5.4e-83 311.2 186 79.0
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 7.0e-83 310.8 186 80.1
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 6.0e-82 307.8 191 75.9
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 7.8e-82 307.4 190 76.8
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 7.8e-82 307.4 190 76.8
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 1.7e-81 306.2 190 75.3
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 2.3e-81 305.8 191 75.4
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.3e-81 305.8 187 74.3
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.3e-81 305.8 187 74.3
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 3.0e-81 305.4 190 76.3
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 3.0e-81 305.4 190 76.3
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 5.0e-81 304.7 189 74.1
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 6.6e-81 304.3 190 77.4
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 8.6e-81 303.9 190 75.3
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 2.5e-80 302.4 190 77.4
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 2.5e-80 302.4 189 73.0
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 3.3e-80 302.0 205 72.2
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.6e-79 299.7 187 72.7
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 1.6e-79 299.7 190 77.4
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 3.6e-79 298.5 190 71.6
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 1.1e-78 297.0 189 74.6
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 1.4e-78 296.6 192 74.5
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 1.4e-78 296.6 190 74.2
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 3.1e-78 295.4 190 72.6
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 3.1e-78 295.4 190 72.1
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 5.2e-78 294.7 184 72.8
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.2e-78 294.7 184 72.8
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 2.0e-77 292.7 186 74.7
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 2.0e-77 292.7 189 72.5
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 2.6e-77 292.4 186 75.3
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 4.4e-77 291.6 191 72.8
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 4.4e-77 291.6 186 73.7
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 5.8e-77 291.2 187 72.7
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 5.8e-77 291.2 187 72.7
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 7.5e-77 290.8 184 71.7
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 7.5e-77 290.8 189 71.4
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.3e-76 290.0 188 71.3
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.7e-76 289.7 188 72.9
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 1.7e-76 289.7 190 73.7
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 1.7e-76 289.7 187 72.2
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 2.2e-76 289.3 190 74.2
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 2.2e-76 289.3 189 70.9
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 4.9e-76 288.1 190 73.7
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 4.9e-76 288.1 188 70.7
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 6.4e-76 287.7 190 69.5
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 6.4e-76 287.7 190 72.6
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 1.1e-75 287.0 190 71.6
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.4e-75 286.6 186 71.0
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 1.9e-75 286.2 189 70.9
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 7.1e-75 284.3 188 70.7
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 7.1e-75 284.3 188 70.2
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 9.2e-75 283.9 189 70.9
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 1.2e-74 283.5 189 72.5
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 1.2e-74 283.5 190 72.1
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.6e-74 283.1 187 71.7
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 2.3e-73 279.3 189 71.4
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 2.3e-73 279.3 186 71.0
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 2.3e-73 279.3 187 69.5
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 3.0e-73 278.9 190 71.1
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 1.5e-72 276.6 191 70.7
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 5.6e-72 274.6 190 67.9
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 5.6e-72 274.6 190 68.4
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 2.8e-71 272.3 190 67.9
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 2.8e-71 272.3 192 67.7
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 3.6e-71 271.9 190 67.9
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 3.6e-71 271.9 186 68.8
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 4.7e-71 271.6 189 69.3
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 8.1e-71 270.8 188 69.1
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.1e-70 270.4 190 68.4
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.1e-70 270.4 190 66.8
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 1.8e-70 269.6 190 65.8
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 2.3e-70 269.2 190 67.9
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 2.3e-70 269.2 190 65.3
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 2.3e-70 269.2 189 68.8
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 3.1e-70 268.9 228 58.3
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 5.2e-70 268.1 190 64.7
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 8.9e-70 267.3 189 67.7
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 8.9e-70 267.3 184 68.5
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 1.5e-69 266.5 190 64.2
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 1.5e-69 266.5 190 64.2
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 2.6e-69 265.8 191 64.9
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 7.6e-69 264.2 190 65.3
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 1.1e-67 260.4 190 64.7
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 2.4e-67 259.2 184 65.2
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 2.7e-66 255.8 185 64.9
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 7.8e-66 254.2 185 65.4
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.0e-65 253.8 189 67.2
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.5e-64 250.0 186 67.7
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.9e-64 249.6 186 62.9
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.9e-64 249.6 187 64.2
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 9.6e-64 247.3 186 62.4
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 1.2e-63 246.9 190 63.7
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.8e-62 243.0 145 79.3
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 3.1e-62 242.3 188 61.7
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 5.8e-61 238.0 146 74.0
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 6.4e-60 234.6 187 61.0
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.9e-59 233.0 186 63.4
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 7.1e-59 231.1 187 60.4
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 3.5e-58 228.8 183 61.2
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 1.3e-57 226.9 187 59.4
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 3.0e-57 225.7 185 61.6
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 3.0e-57 225.7 185 60.0
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.5e-56 222.6 185 58.9
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 5.6e-56 221.5 180 63.9
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.1e-54 217.2 132 76.5
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 2.4e-54 216.1 186 58.1
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 9.0e-54 214.2 186 57.0
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 8.4e-52 207.6 189 58.2
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 8.4e-52 207.6 186 54.3
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.1e-51 207.2 185 56.2
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 1.1e-51 207.2 188 53.2
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 1.8e-33 146.7 111 59.5
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.9e-32 143.3 84 77.4
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 1.4e-30 137.1 82 78.0
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 2.0e-29 133.3 111 59.5
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.0e-25 119.4 98 60.2
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 8.5e-20 101.3 95 54.7
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.0e-16 90.1 116 45.7
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 5.7e-08 62.0 78 43.6


User provided reference genes

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