Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 0.0e+00 1129.4 561 100.0
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 5.5e-277 957.2 587 83.8
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 1.6e-212 743.0 564 67.0
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 5.3e-203 711.4 567 65.3
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 8.7e-198 694.1 519 68.6
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 6.3e-196 688.0 563 63.8
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 8.2e-196 687.6 553 63.8
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 8.2e-196 687.6 552 64.1
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 2.5e-192 676.0 577 61.7
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 1.2e-191 673.7 575 61.9
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 6.1e-191 671.4 561 62.6
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 1.8e-190 669.8 571 63.0
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 3.0e-190 669.1 559 62.4
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 1.3e-188 663.7 561 62.0
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 5.9e-186 654.8 529 63.9
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.3e-185 653.7 531 62.9
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 2.9e-185 652.5 535 63.9
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 7.2e-184 647.9 522 64.9
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 1.6e-183 646.7 536 61.8
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 6.1e-183 644.8 552 62.7
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 3.9e-182 642.1 632 56.5
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 2.2e-180 636.3 544 60.8
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 6.3e-180 634.8 549 60.7
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 1.4e-179 633.6 529 61.6
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 2.9e-177 625.9 529 60.3
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 3.6e-175 619.0 540 59.8
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 1.8e-174 616.7 530 60.8
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 5.2e-174 615.1 632 55.1
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 1.5e-173 613.6 533 60.2
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 7.4e-173 611.3 549 58.5
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 1.7e-172 610.1 564 57.1
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 2.8e-172 609.4 576 56.8
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 2.4e-171 606.3 527 59.0
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 1.6e-170 603.6 540 58.3
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 2.0e-170 603.2 525 60.2
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 2.0e-170 603.2 525 59.6
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 7.7e-170 601.3 540 58.5
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 2.2e-169 599.7 600 54.3
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 6.5e-169 598.2 532 59.0
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 6.5e-169 598.2 569 56.1
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 8.5e-169 597.8 543 57.8
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 1.9e-168 596.7 550 55.6
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 4.2e-168 595.5 526 59.1
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 2.1e-167 593.2 541 57.7
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.6e-167 592.4 590 55.9
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 1.4e-166 590.5 547 58.0
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 1.4e-166 590.5 554 57.6
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 8.8e-166 587.8 529 58.0
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 2.0e-165 586.6 557 58.0
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 2.6e-165 586.3 564 57.1
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 4.4e-165 585.5 542 56.5
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 2.0e-162 576.6 554 54.5
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 7.7e-162 574.7 543 56.2
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 1.0e-161 574.3 499 60.1
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 8.5e-161 571.2 421 68.6
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 1.5e-160 570.5 538 54.3
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 9.4e-160 567.8 524 56.9
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 3.6e-159 565.8 513 59.5
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 2.0e-157 560.1 528 57.8
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 1.3e-156 557.4 541 54.3
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 1.4e-155 553.9 527 55.6
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 2.4e-155 553.1 535 55.0
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 4.1e-155 552.4 535 55.0
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 3.5e-154 549.3 532 55.5
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 7.7e-154 548.1 527 54.6
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 7.7e-154 548.1 467 63.2
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 1.9e-152 543.5 536 53.5
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 5.5e-152 542.0 487 59.1
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 3.6e-151 539.3 529 54.4
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 3.6e-151 539.3 554 54.0
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 6.1e-151 538.5 529 54.1
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 8.0e-151 538.1 539 53.1
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 1.0e-150 537.7 529 55.4
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 5.2e-150 535.4 463 59.4
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 6.8e-150 535.0 527 54.1
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 4.4e-149 532.3 553 54.4
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 1.3e-148 530.8 532 53.9
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 3.7e-148 529.3 539 53.1
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 3.7e-148 529.3 539 53.1
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 6.3e-148 528.5 528 53.4
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 6.3e-148 528.5 534 52.4
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 8.3e-148 528.1 540 54.8
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 7.7e-146 521.5 527 52.4
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 6.6e-145 518.5 523 53.5
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 1.6e-143 513.8 519 52.8
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 2.6e-141 506.5 529 52.7
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 4.4e-141 505.8 550 50.7
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 9.8e-141 504.6 549 50.1
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.0e-138 496.9 563 50.6
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 7.8e-138 495.0 534 51.3
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 6.8e-134 481.9 555 49.7
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 2.9e-132 476.5 554 48.2
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 7.0e-131 471.9 339 71.1
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 9.2e-131 471.5 392 64.5
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 3.5e-122 443.0 391 58.3
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 2.0e-117 427.2 254 79.1
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 3.9e-113 412.9 546 42.3
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 2.0e-109 400.6 266 72.2
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 2.3e-105 387.1 536 41.0
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 7.3e-104 382.1 556 40.5
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 6.9e-102 375.6 316 62.0
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 3.4e-101 373.2 445 48.8
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 3.1e-94 350.1 414 48.1
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 1.4e-91 341.3 225 72.0
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 4.6e-82 309.7 240 62.1
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 5.1e-81 306.2 281 53.7
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 1.5e-69 268.1 458 36.9
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 2.2e-68 264.2 246 58.5
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 5.3e-62 243.0 252 55.2
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 1.4e-57 228.4 170 65.9
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 5.9e-53 213.0 249 43.8
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 1.0e-52 212.2 492 29.7
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 2.4e-46 191.0 217 50.7
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 1.6e-37 161.8 189 45.5
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 4.5e-37 160.2 217 43.3
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.6e-34 151.8 125 57.6
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 1.8e-33 148.3 106 71.7
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 3.1e-30 137.5 203 40.4
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 9.2e-30 136.0 251 38.6
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.0e-28 132.5 122 54.9
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 5.6e-27 126.7 162 44.4
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 5.8e-24 116.7 312 28.2
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 1.6e-21 108.6 134 43.3
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 3.0e-20 104.4 163 42.3
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 5.0e-20 103.6 147 45.6
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 1.4e-17 95.5 158 38.0
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 2.3e-17 94.7 48 91.7
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.4e-14 84.7 65 58.5
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 2.0e-13 81.6 39 89.7
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 8.6e-12 76.3 65 55.4
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 8.9e-09 66.2 111 36.9
Psat1g150120 Pisum sativum HOM05D003313 ORTHO05D004217 1.4e-06 58.9 88 36.4
Psat5g202200 Pisum sativum HOM05D001594 ORTHO05D002862 3.2e-06 57.8 88 35.2
Psat5g202120 Pisum sativum HOM05D001594 ORTHO05D002862 7.1e-06 56.6 88 35.2


User provided reference genes

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