Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 3.1e-82 308.5 169 100.0
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 3.9e-77 291.6 169 92.9
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 1.3e-75 286.6 169 90.5
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 3.8e-72 275.0 169 88.2
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 2.8e-67 258.8 169 81.1
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 6.3e-67 257.7 169 81.7
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 6.3e-67 257.7 169 80.5
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 8.2e-67 257.3 169 82.2
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 1.1e-66 256.9 169 83.4
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 7.0e-66 254.2 169 80.5
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 1.2e-65 253.4 169 80.5
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 1.7e-64 249.6 169 79.9
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 2.9e-64 248.8 169 77.5
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 3.8e-64 248.4 169 78.7
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 8.5e-64 247.3 169 78.7
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 1.9e-63 246.1 172 79.7
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 1.9e-63 246.1 172 79.7
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 1.9e-63 246.1 169 75.7
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 7.2e-63 244.2 170 78.2
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 7.2e-63 244.2 169 76.3
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 1.6e-62 243.0 169 78.7
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 1.6e-62 243.0 171 75.4
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 2.1e-62 242.7 169 76.9
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 2.7e-62 242.3 170 75.9
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.7e-62 242.3 170 74.7
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 1.8e-61 239.6 169 76.3
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 1.8e-61 239.6 169 75.7
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 2.3e-61 239.2 169 75.7
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 3.0e-61 238.8 169 75.1
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 5.2e-61 238.0 169 71.0
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 6.7e-61 237.7 171 76.0
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 6.7e-61 237.7 169 74.6
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 6.7e-61 237.7 169 73.4
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 8.8e-61 237.3 169 74.6
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 1.1e-60 236.9 169 74.0
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 1.1e-60 236.9 171 78.9
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 1.5e-60 236.5 161 73.3
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.5e-60 236.5 170 75.9
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 1.5e-60 236.5 169 72.8
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 2.0e-60 236.1 169 73.4
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 2.0e-60 236.1 169 75.1
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 3.3e-60 235.3 169 72.8
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 5.7e-60 234.6 165 75.2
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 1.3e-59 233.4 169 74.6
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.7e-59 233.0 169 71.0
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 2.2e-59 232.6 169 74.0
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.8e-59 232.3 169 70.4
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 2.8e-59 232.3 170 75.9
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 4.8e-59 231.5 169 70.4
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 6.3e-59 231.1 169 74.0
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 1.1e-58 230.3 169 71.6
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 1.1e-58 230.3 170 74.7
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 1.1e-58 230.3 169 73.4
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 1.1e-58 230.3 169 72.2
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.4e-58 229.9 170 72.9
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 1.4e-58 229.9 169 71.0
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 1.8e-58 229.6 169 71.0
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 9.1e-58 227.3 170 72.4
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 9.1e-58 227.3 172 70.9
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 1.2e-57 226.9 169 71.0
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 2.6e-57 225.7 169 69.2
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 2.6e-57 225.7 169 68.6
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 4.5e-57 224.9 170 68.2
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 7.7e-57 224.2 170 70.6
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.0e-56 223.8 173 72.3
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 2.2e-56 222.6 171 69.6
TWI12G1003 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 2.2e-56 222.6 155 76.8
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 5.0e-56 221.5 171 70.2
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 8.5e-56 220.7 172 69.8
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 8.5e-56 220.7 169 70.4
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 1.1e-55 220.3 171 70.2
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 1.5e-55 219.9 170 71.2
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 1.5e-55 219.9 166 67.5
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 1.9e-55 219.5 169 68.0
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 1.9e-55 219.5 169 68.0
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 2.5e-55 219.2 169 69.2
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 3.2e-55 218.8 169 69.8
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 3.2e-55 218.8 169 69.8
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 4.2e-55 218.4 169 69.2
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 4.2e-55 218.4 173 72.3
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 7.2e-55 217.6 169 69.2
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 7.2e-55 217.6 169 68.6
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 1.2e-54 216.9 169 67.5
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 1.6e-54 216.5 170 69.4
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 1.6e-54 216.5 170 69.4
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 1.6e-54 216.5 172 67.4
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 2.7e-54 215.7 170 69.4
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 2.7e-54 215.7 169 67.5
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 3.6e-54 215.3 169 68.6
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 4.7e-54 214.9 169 68.0
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 4.7e-54 214.9 169 68.0
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 4.7e-54 214.9 169 68.0
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 4.7e-54 214.9 169 65.7
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 4.7e-54 214.9 169 68.0
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 4.7e-54 214.9 166 69.3
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 6.1e-54 214.5 171 66.7
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 6.1e-54 214.5 169 68.0
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 6.1e-54 214.5 169 68.0
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 8.0e-54 214.2 171 66.1
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 1.8e-53 213.0 166 68.7
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 2.3e-53 212.6 169 67.5
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 2.3e-53 212.6 169 67.5
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 2.3e-53 212.6 169 67.5
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 2.3e-53 212.6 171 68.4
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 2.3e-53 212.6 171 68.4
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 3.0e-53 212.2 171 68.4
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 3.0e-53 212.2 169 65.1
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 6.7e-53 211.1 173 65.3
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.5e-52 209.9 172 65.1
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 1.5e-52 209.9 172 66.9
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 2.0e-52 209.5 169 65.7
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 2.0e-52 209.5 172 68.0
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 2.0e-52 209.5 165 67.3
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 2.6e-52 209.1 169 65.7
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 4.4e-52 208.4 171 65.5
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 5.7e-52 208.0 158 70.3
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 1.3e-51 206.8 170 64.7
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 1.3e-51 206.8 170 64.7
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 3.7e-51 205.3 169 65.7
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 3.7e-51 205.3 170 64.1
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 4.8e-51 204.9 171 63.7
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 4.8e-51 204.9 171 64.9
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 4.8e-51 204.9 171 63.7
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 4.8e-51 204.9 171 63.7
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 4.8e-51 204.9 170 64.7
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 4.8e-51 204.9 171 66.1
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 6.3e-51 204.5 171 63.7
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 8.3e-51 204.1 167 65.3
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 1.1e-50 203.8 171 66.1
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 1.4e-50 203.4 170 62.9
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 1.4e-50 203.4 170 67.1
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 1.3e-48 196.8 169 63.3
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 2.2e-48 196.1 169 65.1
Nn6g31900 Nelumbo nucifera HOM05D004247 ORTHO05D004994 5.0e-48 194.9 146 72.6
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 5.0e-48 194.9 170 62.9
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 1.1e-47 193.7 169 61.5
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 3.2e-47 192.2 162 63.0
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 3.6e-46 188.7 161 58.4
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 3.1e-42 175.6 102 80.4
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 5.4e-42 174.9 102 79.4
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 1.5e-39 166.8 100 76.0
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 2.3e-37 159.5 100 74.0
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 2.3e-37 159.5 170 55.3
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 3.0e-37 159.1 170 57.1
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 2.6e-36 156.0 175 53.1
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 3.4e-36 155.6 171 53.8
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.4e-34 149.4 167 48.5
Sc02g0008920 Simmondsia chinensis HOM05D004247 ORTHO05D004994 1.2e-33 147.1 143 58.0
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.0e-33 146.4 171 46.8
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 3.9e-32 142.1 171 46.2
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 8.6e-32 141.0 174 44.3
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 3.6e-30 135.6 174 47.1
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 1.8e-29 133.3 217 41.0
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 2.2e-27 126.3 146 50.7
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 8.3e-27 124.4 173 50.3
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 8.3e-27 124.4 173 48.6
Mapoly0080s0027 Marchantia polymorpha HOM05D004247 ORTHO05D004994 1.2e-25 120.6 170 44.7
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 3.5e-25 119.0 145 48.3
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 3.9e-24 115.5 70 75.7
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 3.3e-23 112.5 70 72.9
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 3.6e-22 109.0 149 43.6
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.1e-18 95.5 67 65.7
Nitab4.5_0000498g0120 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.3e-16 90.5 81 59.3
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 1.8e-13 80.1 44 84.1
Cc01_g01310 Coffea canephora HOM05D004247 ORTHO05D004994 3.4e-12 75.9 69 69.6
TAR628G0544 Trochodendron aralioides HOM05D004247 ORTHO05D004994 1.6e-06 57.0 64 57.8


User provided reference genes

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