Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 1.7e-143 512.7 264 100.0
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 7.4e-131 470.7 273 89.7
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 1.6e-96 356.7 273 67.0
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 4.7e-93 345.1 272 66.5
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.8e-92 343.2 269 66.5
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 2.3e-92 342.8 269 66.5
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 1.5e-91 340.1 271 64.6
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 1.5e-91 340.1 264 68.6
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 2.6e-91 339.3 271 65.3
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 2.2e-90 336.3 254 68.9
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 4.1e-89 332.0 275 65.8
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 7.7e-88 327.8 272 61.8
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 2.1e-85 319.7 269 61.3
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 9.8e-83 310.8 258 63.2
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 9.2e-81 304.3 253 63.2
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 2.0e-80 303.1 271 57.9
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 2.7e-80 302.8 273 57.9
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 5.9e-80 301.6 269 59.5
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 7.7e-80 301.2 255 64.7
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 2.3e-79 299.7 270 58.5
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 2.3e-79 299.7 271 56.8
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 8.6e-79 297.7 272 57.4
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 8.6e-79 297.7 208 74.0
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 2.5e-78 296.2 255 60.4
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 4.3e-78 295.4 239 64.4
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 2.1e-77 293.1 271 57.9
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 2.8e-77 292.7 298 53.4
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 6.1e-77 291.6 264 56.1
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 1.0e-76 290.8 264 59.8
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 2.0e-75 286.6 263 57.0
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 7.5e-75 284.6 261 57.9
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 4.9e-74 282.0 270 55.6
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 3.2e-73 279.3 267 55.1
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 4.1e-73 278.9 260 57.7
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 9.2e-73 277.7 276 56.2
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 3.5e-72 275.8 263 53.2
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 7.8e-72 274.6 251 59.8
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 5.0e-71 271.9 275 53.8
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 6.6e-71 271.6 265 54.3
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 6.6e-71 271.6 210 68.1
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 1.5e-70 270.4 262 58.4
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 7.3e-70 268.1 275 52.0
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 1.2e-69 267.3 264 54.2
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 1.6e-69 266.9 263 53.2
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 3.6e-69 265.8 269 50.2
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 4.7e-69 265.4 268 51.1
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 6.2e-69 265.0 267 54.3
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 6.2e-69 265.0 273 51.3
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 8.0e-69 264.6 273 53.5
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 1.0e-68 264.2 263 52.5
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 3.1e-68 262.7 267 50.2
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 5.2e-68 261.9 263 54.0
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 6.8e-68 261.5 267 50.2
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 6.8e-68 261.5 275 52.7
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 6.8e-68 261.5 274 52.2
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 8.9e-68 261.2 271 52.8
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 9.8e-67 257.7 269 52.0
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 9.8e-67 257.7 269 51.3
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 2.9e-66 256.1 273 50.9
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 3.7e-66 255.8 267 51.7
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 3.2e-65 252.7 250 55.2
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 3.2e-65 252.7 212 59.9
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 9.2e-65 251.1 266 53.8
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.7e-64 249.6 266 49.6
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 3.5e-64 249.2 260 51.2
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 3.5e-64 249.2 261 50.6
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.0e-63 247.7 249 53.4
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 1.3e-63 247.3 262 50.4
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 2.3e-63 246.5 271 49.1
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 5.0e-63 245.4 267 52.1
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 1.5e-62 243.8 191 66.5
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 7.3e-62 241.5 229 55.5
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 2.1e-61 240.0 254 52.8
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 6.2e-61 238.4 267 49.4
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 6.2e-61 238.4 275 48.4
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 8.1e-61 238.0 258 50.0
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 1.5e-59 233.8 278 48.2
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 1.2e-56 224.2 212 56.6
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 1.0e-55 221.1 270 46.7
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 2.3e-55 219.9 283 43.8
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 4.3e-54 215.7 224 53.1
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 1.2e-53 214.2 262 46.2
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 1.6e-53 213.8 212 52.8
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 1.8e-52 210.3 141 78.7
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 5.2e-52 208.8 231 49.8
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 5.2e-52 208.8 249 47.8
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 2.0e-51 206.8 194 55.7
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 2.0e-51 206.8 264 45.5
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 5.8e-51 205.3 243 46.9
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.3e-50 204.1 231 48.5
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 5.4e-49 198.7 241 46.9
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.0e-47 194.5 258 45.0
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 2.2e-42 176.8 193 49.7
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 2.9e-42 176.4 181 51.4
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 4.2e-41 172.6 170 53.5
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 1.6e-21 107.5 108 49.1
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 2.2e-18 97.1 267 33.0
Sabra02G0043800 Salix brachista HOM05D005331 ORTHO05D007596 1.2e-16 91.3 83 66.3
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 2.3e-15 87.0 85 58.8
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 3.8e-10 69.7 55 54.5
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.1e-09 68.2 55 52.7
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.5e-06 57.8 55 49.1
Lsat_1_v5_gn_5_160321 Lactuca sativa HOM05D007546 ORTHO05D009542 4.3e-06 56.2 62 48.4


User provided reference genes

Program Settings