Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 7.2e-240 833.6 436 100.0
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 2.4e-219 765.4 427 93.2
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 6.9e-142 508.1 377 70.6
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 2.0e-141 506.5 371 69.3
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 1.3e-140 503.8 368 72.3
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 7.1e-139 498.0 371 69.8
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 9.3e-139 497.7 361 70.4
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 1.6e-138 496.9 409 67.0
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 1.6e-138 496.9 367 68.7
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 4.6e-138 495.4 361 69.8
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 8.7e-137 491.1 439 62.6
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 4.3e-136 488.8 361 69.8
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 3.1e-134 482.6 344 71.5
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.0e-133 479.9 371 66.6
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 5.8e-133 478.4 378 66.7
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 1.0e-132 477.6 364 70.3
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 4.9e-132 475.3 383 66.6
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 4.9e-132 475.3 369 66.9
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 6.5e-132 474.9 371 66.3
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 8.4e-132 474.6 371 66.0
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 1.1e-131 474.2 349 70.8
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 1.4e-131 473.8 372 65.1
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 4.2e-131 472.2 370 67.8
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 5.5e-131 471.9 378 65.6
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 2.7e-130 469.5 379 65.4
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 2.7e-130 469.5 433 59.8
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 2.7e-130 469.5 378 65.6
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 8.7e-129 464.5 421 60.8
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 1.1e-128 464.2 380 65.0
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 1.1e-128 464.2 387 65.4
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 1.1e-128 464.2 375 65.9
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 1.5e-128 463.8 387 65.4
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 1.9e-128 463.4 372 64.8
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 2.5e-128 463.0 375 66.7
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 5.7e-128 461.8 373 65.4
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 9.7e-128 461.1 343 69.4
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 2.2e-127 459.9 392 62.2
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 2.2e-127 459.9 379 64.6
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 2.8e-127 459.5 366 66.4
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 3.7e-127 459.1 366 64.5
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 6.3e-127 458.4 348 66.4
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 1.8e-126 456.8 348 66.4
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 2.4e-126 456.4 425 60.2
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 2.4e-126 456.4 373 65.1
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 2.4e-126 456.4 352 70.5
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 3.1e-126 456.1 375 64.0
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 3.1e-126 456.1 375 65.6
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 3.1e-126 456.1 343 67.9
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 4.1e-126 455.7 379 64.4
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 5.3e-126 455.3 370 63.2
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 6.9e-126 454.9 371 64.2
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 6.9e-126 454.9 353 67.7
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 1.5e-125 453.8 369 65.9
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 2.6e-125 453.0 368 63.3
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 3.4e-125 452.6 371 63.9
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 1.3e-124 450.7 372 64.5
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 2.9e-124 449.5 371 63.1
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 2.9e-124 449.5 369 65.0
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 2.9e-124 449.5 349 68.2
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 3.8e-124 449.1 369 64.2
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 5.0e-124 448.7 444 57.9
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 5.0e-124 448.7 371 63.6
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 6.5e-124 448.4 371 63.6
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 1.9e-123 446.8 372 63.4
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 3.2e-123 446.0 375 63.7
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 9.4e-123 444.5 490 52.0
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 1.2e-122 444.1 363 64.7
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 2.7e-122 443.0 338 67.5
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 3.6e-122 442.6 374 62.0
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 4.6e-122 442.2 373 63.8
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.4e-121 440.7 354 65.8
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 2.3e-121 439.9 370 63.5
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 3.9e-121 439.1 380 63.9
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 5.1e-121 438.7 333 68.2
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 5.1e-121 438.7 379 63.1
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 3.3e-120 436.0 370 61.9
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 5.7e-120 435.3 365 64.1
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 2.2e-119 433.3 370 63.0
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 1.4e-118 430.6 348 64.4
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 3.1e-118 429.5 350 63.7
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 1.5e-117 427.2 376 62.5
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 2.6e-117 426.4 348 64.7
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 7.7e-117 424.9 371 60.9
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 1.7e-116 423.7 353 62.9
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 2.9e-116 422.9 377 60.2
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 3.8e-116 422.5 369 60.2
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 6.5e-116 421.8 373 62.2
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 3.2e-115 419.5 312 69.6
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 1.0e-113 414.5 343 63.3
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 3.9e-113 412.5 371 60.6
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 2.8e-111 406.4 341 62.2
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 4.4e-104 382.5 298 67.8
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 7.0e-94 348.6 373 53.1
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 4.5e-93 345.9 240 73.8
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 8.8e-89 331.6 398 49.0
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 2.4e-86 323.6 367 51.0
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 5.4e-86 322.4 265 64.9
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 7.0e-86 322.0 345 54.2
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 1.3e-84 317.8 366 50.8
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.0e-81 308.1 212 74.5
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 4.9e-71 272.7 209 68.9
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 1.9e-70 270.8 203 68.5
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 1.8e-65 254.2 347 42.4
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 8.3e-63 245.4 343 39.1
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 5.4e-62 242.7 345 43.2
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 3.0e-60 236.9 222 55.4
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 3.6e-58 229.9 346 42.5
Cc03_g11180 Coffea canephora HOM05D006898 ORTHO05D008506 4.8e-42 176.4 171 58.5
Zm00001eb231840 Zea mays HOM05D006898 ORTHO05D008506 2.9e-39 167.2 174 52.9
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 7.1e-30 136.0 245 36.7
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 1.0e-28 132.1 113 62.8
Hma1.2p1_2279F.1_g318700 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 2.1e-21 107.8 95 58.9
MCO07G214 Micromonas commoda HOM05D006898 ORTHO05D008506 8.7e-20 102.4 353 28.6
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 2.1e-18 97.8 104 51.0
Cc00_g34780 Coffea canephora HOM05D006898 ORTHO05D008506 8.2e-18 95.9 104 54.8
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 3.1e-17 94.0 144 45.8
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 8.4e-15 85.9 118 44.1
PRCOL_00003584 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 4.2e-14 83.6 347 27.1
Actinidia29335 Actinidia chinensis HOM05D006898 ORTHO05D008506 6.9e-09 66.2 121 37.2
HanXRQChr08g0214621 Helianthus annuus HOM05D006898 ORTHO05D008506 4.2e-06 57.0 36 69.4


User provided reference genes

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