Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 0.0e+00 1232.2 617 100.0
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 0.0e+00 1104.0 629 89.5
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 1.4e-236 823.2 619 68.5
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 3.1e-220 768.8 620 64.7
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 6.8e-220 767.7 622 65.9
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 1.9e-217 759.6 619 64.6
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 3.9e-215 751.9 652 62.6
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 5.1e-215 751.5 649 60.6
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 8.6e-215 750.7 618 65.0
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 3.1e-212 742.3 614 64.5
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 9.9e-211 737.3 617 63.5
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 1.7e-210 736.5 617 63.4
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 2.9e-210 735.7 612 61.6
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 1.9e-209 733.0 615 63.6
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 3.0e-207 725.7 617 62.1
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 5.1e-207 724.9 616 62.5
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 5.1e-207 724.9 625 62.7
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 7.3e-198 694.5 613 60.0
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 9.6e-198 694.1 625 60.3
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 2.8e-197 692.6 643 60.2
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 3.1e-196 689.1 620 60.3
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 1.2e-195 687.2 618 59.9
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 4.5e-195 685.3 594 60.1
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 7.6e-195 684.5 611 60.1
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 9.9e-195 684.1 611 59.9
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.3e-194 683.7 620 60.6
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 8.4e-194 681.0 619 59.8
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 2.4e-193 679.5 621 59.1
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 9.3e-193 677.6 620 59.4
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.6e-192 676.8 636 59.1
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 1.6e-192 676.8 593 60.7
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 3.5e-192 675.6 617 60.3
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 3.0e-191 672.5 632 57.9
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 3.9e-191 672.2 589 60.1
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 8.1e-189 664.5 606 58.1
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 1.4e-188 663.7 614 57.7
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 1.8e-188 663.3 621 57.8
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 1.0e-186 657.5 573 60.6
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 8.4e-186 654.4 613 57.7
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 2.7e-184 649.4 573 61.1
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 2.3e-183 646.4 615 56.6
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 1.5e-182 643.7 618 56.6
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 5.7e-182 641.7 553 60.6
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 1.8e-180 636.7 567 60.3
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 5.3e-180 635.2 624 56.6
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 6.9e-180 634.8 609 55.5
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 7.6e-179 631.3 613 55.6
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 2.2e-178 629.8 609 56.0
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 7.1e-177 624.8 613 56.0
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 1.6e-176 623.6 609 56.2
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 1.3e-175 620.5 614 56.8
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 1.8e-175 620.2 616 56.2
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 2.5e-174 616.3 534 59.7
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 9.7e-174 614.4 616 55.4
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 8.2e-173 611.3 515 63.3
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 2.0e-171 606.7 662 51.4
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 1.0e-170 604.4 621 54.1
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 3.8e-170 602.4 612 53.8
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 2.5e-169 599.7 620 54.4
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 9.4e-169 597.8 658 53.0
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 3.6e-168 595.9 577 56.0
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 4.6e-168 595.5 613 54.3
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 3.3e-166 589.3 617 54.0
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 4.8e-165 585.5 598 53.2
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 1.8e-164 583.6 615 52.7
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 2.4e-164 583.2 605 54.7
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.5e-163 580.5 558 56.5
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 2.9e-162 576.2 635 52.4
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 1.2e-160 570.9 582 54.6
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 2.7e-160 569.7 614 52.3
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 6.1e-160 568.5 550 55.8
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 7.9e-160 568.2 612 50.8
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 1.4e-159 567.4 579 53.9
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 6.7e-159 565.1 623 51.0
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 5.7e-158 562.0 585 54.7
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 1.3e-157 560.8 633 50.9
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 1.1e-156 557.8 580 53.6
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 5.3e-156 555.4 609 52.2
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 5.3e-156 555.4 579 53.5
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 1.2e-155 554.3 525 55.6
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 1.0e-154 551.2 579 53.0
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 3.2e-153 546.2 542 54.8
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 2.1e-152 543.5 542 53.3
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 4.7e-152 542.3 522 55.4
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 5.2e-151 538.9 655 48.7
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 3.5e-147 526.2 637 48.5
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 4.5e-147 525.8 637 47.4
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 7.7e-147 525.0 628 49.2
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 6.8e-143 511.9 451 58.5
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 1.1e-140 504.6 495 53.9
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 4.5e-139 499.2 411 61.6
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 5.9e-139 498.8 597 49.1
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 8.5e-138 495.0 616 48.4
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 1.0e-135 488.0 645 45.1
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 5.4e-132 475.7 574 49.3
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 3.8e-130 469.5 597 45.2
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 2.9e-125 453.4 529 47.1
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 2.8e-96 357.1 452 46.9
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 3.5e-91 340.1 560 37.9
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 1.0e-90 338.6 533 38.3
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 9.0e-87 325.5 464 39.9
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 7.1e-84 315.8 636 35.8
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 1.4e-68 265.0 207 63.8
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 2.3e-66 257.7 291 51.9
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 1.6e-56 224.9 191 62.8
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 1.0e-53 215.7 322 39.1
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 7.4e-41 172.9 571 26.8
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 2.9e-29 134.4 419 29.1
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 2.5e-28 131.3 626 23.5
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 4.0e-26 124.0 375 31.2
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 1.4e-23 115.5 123 51.2
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 1.4e-15 89.0 68 64.7
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.1e-15 87.8 131 48.9
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 3.1e-15 87.8 131 48.9
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.6e-14 85.5 131 48.1
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.6e-14 85.5 131 48.1
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 1.6e-14 85.5 112 41.1
Actinidia17422 Actinidia chinensis HOM05D006562 ORTHO05D008230 7.5e-09 66.6 202 28.7
Lalb_Chr01g0005801 Lupinus albus HOM05D004977 ORTHO05D006454 2.7e-06 58.2 296 20.9
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 5.9e-06 57.0 70 48.6
HPP92_002246 Vanilla planifolia HOM05D004977 ORTHO05D006454 5.9e-06 57.0 287 20.6
Pp3c22_21030 Physcomitrium patens HOM05D004977 ORTHO05D006454 7.8e-06 56.6 313 20.8


User provided reference genes

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