Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 4.6e-79 297.7 141 100.0
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 5.8e-66 254.2 142 87.3
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 2.8e-60 235.3 148 76.4
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 3.6e-60 235.0 142 79.6
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 5.8e-58 227.6 152 73.7
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 2.4e-56 222.2 139 78.4
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 1.6e-55 219.5 139 74.8
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 2.7e-55 218.8 117 82.1
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 3.5e-55 218.4 139 74.1
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 1.0e-54 216.9 130 77.7
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 1.8e-54 216.1 139 74.1
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 2.3e-54 215.7 118 83.1
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 3.0e-54 215.3 139 70.5
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 3.9e-54 214.9 118 82.2
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 3.9e-54 214.9 118 82.2
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 5.1e-54 214.5 137 73.7
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 5.1e-54 214.5 137 73.7
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 1.1e-53 213.4 139 72.7
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 1.1e-53 213.4 138 73.9
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 1.5e-53 213.0 139 72.7
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 2.5e-53 212.2 144 70.8
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 2.5e-53 212.2 139 74.1
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 3.3e-53 211.8 138 73.9
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 4.3e-53 211.5 138 72.5
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 5.6e-53 211.1 144 72.2
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 5.6e-53 211.1 131 77.1
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 5.6e-53 211.1 131 77.1
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 5.6e-53 211.1 131 77.1
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 5.6e-53 211.1 112 83.9
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 9.6e-53 210.3 139 71.2
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 9.6e-53 210.3 139 71.2
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 9.6e-53 210.3 120 80.8
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 3.6e-52 208.4 148 67.6
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 3.6e-52 208.4 126 77.0
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 3.6e-52 208.4 140 72.1
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 6.2e-52 207.6 144 70.8
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 1.1e-51 206.8 144 70.1
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 1.1e-51 206.8 126 77.8
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 1.8e-51 206.1 141 70.9
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 2.4e-51 205.7 120 75.0
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 2.4e-51 205.7 120 77.5
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 3.1e-51 205.3 129 75.2
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 4.0e-51 204.9 148 68.9
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 5.3e-51 204.5 134 72.4
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 1.5e-50 203.0 148 67.6
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 2.0e-50 202.6 133 72.9
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 4.5e-50 201.4 139 68.3
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 4.5e-50 201.4 140 68.6
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 5.8e-50 201.1 141 68.8
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 7.6e-50 200.7 112 78.6
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 1.3e-49 199.9 135 68.9
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 2.2e-49 199.1 128 73.4
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 2.2e-49 199.1 122 73.8
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 2.2e-49 199.1 110 80.0
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 3.8e-49 198.4 126 72.2
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 4.9e-49 198.0 128 71.9
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 1.9e-48 196.1 158 63.3
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 4.2e-48 194.9 110 80.0
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 5.5e-48 194.5 126 71.4
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 7.1e-48 194.1 109 78.9
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 7.1e-48 194.1 121 76.0
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 7.1e-48 194.1 111 77.5
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 1.6e-47 193.0 133 68.4
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 2.7e-47 192.2 142 64.1
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 4.6e-47 191.4 110 77.3
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 6.0e-47 191.0 109 78.9
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 7.9e-47 190.7 131 70.2
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 7.9e-47 190.7 174 56.3
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 1.3e-46 189.9 142 64.1
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 1.3e-46 189.9 138 65.9
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.8e-46 189.5 138 65.9
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 2.3e-46 189.1 109 77.1
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 5.1e-46 188.0 138 65.2
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 7.4e-45 184.1 120 70.0
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 7.4e-45 184.1 112 74.1
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 7.4e-45 184.1 113 69.0
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 1.6e-44 183.0 132 67.4
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.6e-44 183.0 119 74.8
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 1.4e-43 179.9 112 73.2
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 1.4e-43 179.9 155 58.7
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 1.4e-43 179.9 124 69.4
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 1.8e-43 179.5 145 60.7
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 3.1e-43 178.7 137 62.8
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 5.3e-43 177.9 149 60.4
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 9.0e-43 177.2 143 60.1
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 1.5e-42 176.4 145 61.4
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 1.5e-42 176.4 110 70.0
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 2.6e-42 175.6 133 63.9
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 2.6e-42 175.6 149 60.4
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 1.0e-41 173.7 185 49.7
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 1.0e-41 173.7 113 68.1
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 2.9e-41 172.2 133 60.9
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 3.8e-41 171.8 112 69.6
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 7.1e-40 167.5 114 64.0
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 1.2e-39 166.8 109 70.6
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 4.6e-39 164.9 147 55.8
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 3.0e-38 162.2 117 62.4
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 3.9e-38 161.8 150 56.7
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 8.7e-38 160.6 97 75.3
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 8.7e-38 160.6 97 76.3
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 3.3e-37 158.7 150 54.0
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 1.3e-36 156.8 114 60.5
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 2.1e-36 156.0 111 61.3
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 1.3e-30 136.7 102 58.8
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 5.1e-30 134.8 105 54.3
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 2.4e-27 125.9 88 69.3
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 3.8e-25 118.6 88 65.9
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 5.0e-25 118.2 108 49.1
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 1.0e-22 110.5 96 55.2
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 4.5e-18 95.1 51 80.4
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 1.3e-17 93.6 68 61.8
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.1e-16 90.5 53 77.4
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 1.9e-16 89.7 110 40.0
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 2.5e-16 89.4 53 75.5
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 4.2e-16 88.6 84 52.4
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 1.2e-15 87.0 53 75.5
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 2.1e-15 86.3 45 82.2
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 2.7e-15 85.9 48 75.0
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 3.9e-14 82.0 51 72.5
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 5.2e-14 81.6 48 75.0
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 8.8e-14 80.9 50 72.0
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 1.5e-08 63.5 94 39.4


User provided reference genes

Program Settings